prot_Ecto-sp8_S_contig9218.30603.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9218.30603.1
Unique Nameprot_Ecto-sp8_S_contig9218.30603.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9218.30603.1 vs. uniprot
Match: A0A6H5KU41_9PHAE (Avl9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU41_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.190e-120
Identity = 187/203 (92.12%), Postives = 194/203 (95.57%), Query Frame = 0 
Query:    1 MHAGTTNTMMQVMPNANLDLLLNVDTWEASWGKTDRAKAALHMGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLEEACRRXXXXXXXXXXXALEDGGRGSAMEMIAGVVTPTLKGIGLNKAWQQTATWLNGSGPVPVATALESHGQRWSELWTESENFGVWQSSHRLA 203
            MHAGTTN+MMQVMPNA+LDLLLNVDTWEASWGKTDRAKAAL MGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLE+A   XXXXXXXXX   LE+GGRGSAMEMIAGVVTPTL+GIGL KAWQQTATWLNGSGPVPVATALE+HG+RWSELWTESENF VWQSSHRLA
Sbjct:    1 MHAGTTNSMMQVMPNADLDLLLNVDTWEASWGKTDRAKAALDMGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLEQARXXXXXXXXXXXKAELENGGRGSAMEMIAGVVTPTLEGIGLRKAWQQTATWLNGSGPVPVATALEAHGKRWSELWTESENFAVWQSSHRLA 203
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BLAST of mRNA_Ecto-sp8_S_contig9218.30603.1 vs. uniprot
Match: D7FT00_ECTSI (Avl9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT00_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 5.090e-105
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 
Query:   19 DLLLNVDTWEASWGKTDRAKAALHMGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLEEACRRXXXXXXXXXXXALEDGGRGSAMEMIAGVVTPTLKGIGLNKAWQQTATWLNGSGPVPVATALESHGQRWSELWTESENFGVWQSSHRLA 203
            DLLLNVDTWEA WGKT+RAKAAL MGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLEEA   XXXXXXXXXXX LEDGGRGSAM+MIAGVVTPTL GIGLNKAWQQTATWLNGSGPVPVA ALESHGQRWSELWTESENFGVWQSSHRLA
Sbjct:  432 DLLLNVDTWEARWGKTERAKAALDMGEPDRSFARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARNASLEEARXXXXXXXXXXXXXXLEDGGRGSAMKMIAGVVTPTLDGIGLNKAWQQTATWLNGSGPVPVAAALESHGQRWSELWTESENFGVWQSSHRLA 616
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BLAST of mRNA_Ecto-sp8_S_contig9218.30603.1 vs. uniprot
Match: A0A835Z636_9STRA (Avl9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z636_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.700e-23
Identity = 74/222 (33.33%), Postives = 96/222 (43.24%), Query Frame = 0 
Query:    3 AGTTNTMMQVMPNANLDLLLNVDTWEASWGKTDRAKAALHMGEPDRSFARELVRATK--------RHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAAECLARN-ASLEEACRRXXXXXXXXXXXALEDGGRGSAMEMIAGVVTPTLKGIGLNKAWQQTATWLNGSGPVP-------------VATALESHGQRWSELWTESENFGVWQSSHRL 202
            AGTTN M+Q MP A LD L+++D    S   T RA+AA   G+ DR+FA+ LV AT                   G+ EG  W+GS AW ADQFQL FE+L   AA  LAR  A+                  AL       +   + G         G    +   A WLNG                  VA ALE +G+ W+  W ++ENF  W +S  +
Sbjct:  443 AGTTNAMIQSMPAAALDALVDLDRGVVSTAGTPRARAAFACGDDDRAFAQSLVGATAGAXXXXXXXXXXXXXXXSGAQEGAAWRGSGAWAADQFQLFFEELAARAAGALAREKAAARRRAEGVVDGSAAVLGNALVSWASSLSRRALPGAAPSPPSNGGAADPFAPLA-WLNGGXXXXXXXXXXXXXAQRAVAGALEEYGRAWARAWVQTENFHTWCTSQAI 663
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9218.30603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU41_9PHAE1.190e-12092.12Avl9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FT00_ECTSI5.090e-10594.59Avl9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z636_9STRA9.700e-2333.33Avl9 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..129
IPR018307AVL9/DENND6 domainPFAMPF09794Avl9coord: 3..97
e-value: 5.2E-6
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9218contigEcto-sp8_S_contig9218:1..2469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9218.30603.1mRNA_Ecto-sp8_S_contig9218.30603.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9218 1..2469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9218.30603.1 ID=prot_Ecto-sp8_S_contig9218.30603.1|Name=mRNA_Ecto-sp8_S_contig9218.30603.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=203bp
MHAGTTNTMMQVMPNANLDLLLNVDTWEASWGKTDRAKAALHMGEPDRSF
ARELVRATKRHLGGGVGGDGSMEGVGWQGSSAWIADQFQLHFEDLVTTAA
ECLARNASLEEACRREEEEQEQRRKAALEDGGRGSAMEMIAGVVTPTLKG
IGLNKAWQQTATWLNGSGPVPVATALESHGQRWSELWTESENFGVWQSSH
RLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018307ABL9/DENND6_dom