prot_Ecto-sp8_S_contig9215.30594.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9215.30594.1
Unique Nameprot_Ecto-sp8_S_contig9215.30594.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length1071
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9215.30594.1 vs. uniprot
Match: D8LDB0_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB0_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 4.740e-168
Identity = 293/312 (93.91%), Postives = 296/312 (94.87%), Query Frame = 0 
Query:    4 QVAFCEVSAEDIPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQGLVRQLETANNDNQRLKAYAELSAKDGRRMKRESVQHHHVLNTCQSVLRQYGIDPRTIWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMPPCGSHKPSAPPPPVEDSGVAQEGHNCGAAXXXXXTSASGTPVARVCGACGKAFSSEQFLRKHMDRRHPDLVRQDTAPLAEKEEAKYDSPASTPLPXXXXXXXXXXXXXXXXXXXXXXXXGKGTGSEDKGGGENGIGSEVVEGARRLGELVREREHARFKLEVVALRREVEDLK 315
            +VAFCEVSAEDIPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQGLVRQLETANN+NQRLKAYAELSAKDGRRMKRESVQH HVLNTCQSVLRQYGIDPR IWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMP CGSHKPSAPPPPVEDSGVAQ GHNCGAA      S SGTPVARVCGACGKAFSSEQFLRKHMDRRHPDLVRQDTAPLAEKEE K DSPASTPLP XXXXXXXXXXXXXXXXXXXXXXX KGTGSEDKGGGEN IGSEVVEGARRLGELVREREHARFKLEVVALRREV+DLK
Sbjct:   54 EVAFCEVSAEDIPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQGLVRQLETANNNNQRLKAYAELSAKDGRRMKRESVQHKHVLNTCQSVLRQYGIDPRAIWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMPSCGSHKPSAPPPPVEDSGVAQGGHNCGAAVSGGGASTSGTPVARVCGACGKAFSSEQFLRKHMDRRHPDLVRQDTAPLAEKEEVKNDSPASTPLPPXXXXXXXXXXXXXXXXXXXXXXXXKGTGSEDKGGGENVIGSEVVEGARRLGELVREREHARFKLEVVALRREVQDLK 365
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BLAST of mRNA_Ecto-sp8_S_contig9215.30594.1 vs. uniprot
Match: A0A6H5KN09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN09_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 5.760e-130
Identity = 243/326 (74.54%), Postives = 257/326 (78.83%), Query Frame = 0 
Query:  754 GSNVDRVCRQGEISRTTAAAADLSTPTAKAVTTTTASGTSLCTVPSPASETPGVAAQNSVVVSSWQRPTSTTTADTLGSERNTLGDESLVPRGVLATEARETTNIVIQVGSRSANRRNDVLANSSGQDEEKEEKNDCDGDVGTDIMVKAPYNSGVDAGAG--------ASHNRRAVTDATSDTKQAQGGWAFATSAVSGAEIDRGTGEPAAAVAAVGLFRKDKRPQLSNALSFSDDEXXXXXXXXXXXXXXXXXTGDAAVVNTAGGGATSRPDDSLASSIPAKTHIRPMPSFSSSDASVVDEQLLEDFGEDRPRLSSAKQLPDKSG 1071
            GS   +  RQGEI+RTTAAAADLSTPTAKAV TTTASG S  TVPSPA ETPGVAAQN VVV SWQRPTSTTTADTLGSE NTLGDESL  RG LA+EARE TNIV+QV SRSANRRNDVLANSSGQDEE+EE NDCDGDVGTD +V AP                  A HNRR+VT+ATSDTKQA+GGWAFATSAVSGAEIDRG GEP AAVA VGLF KDKRPQ S+ALS  DDE                 TGD AVVN AG GAT +PDDSLASSIPA+THIRPMPSFSSSDASVVDEQLLEDFGED+PR+SS KQLPDKSG
Sbjct:   18 GSRQTQAIRQGEIARTTAAAADLSTPTAKAVATTTASGASRYTVPSPAPETPGVAAQNPVVVPSWQRPTSTTTADTLGSEHNTLGDESLELRGTLASEAREPTNIVVQVESRSANRRNDVLANSSGQDEEQEETNDCDGDVGTDTIVNAPXXXXXXXXXXXXXXXXXXAHHNRRSVTEATSDTKQAEGGWAFATSAVSGAEIDRGNGEPVAAVATVGLFGKDKRPQHSDALSVPDDEEEGEGRENNYGGNGHSRTGDEAVVNAAGDGATWKPDDSLASSIPAETHIRPMPSFSSSDASVVDEQLLEDFGEDKPRMSSTKQLPDKSG 343
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BLAST of mRNA_Ecto-sp8_S_contig9215.30594.1 vs. uniprot
Match: A0A836CKW3_9STRA (C2H2 zinc finger protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.060e-13
Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 0 
Query:   15 IPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQGLVRQLETANNDNQRLKAYAELSAKDGRRMKRESVQHHHVLNTCQSVLRQYGIDPRTIWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMPPCGSHKPSAPPPPVEDSGVAQEGHNCGAAXXXXXTSASGTP---VARVCGACGKAFSSEQFLRKHMDRRHP 210
            + P G  D  VKL RLSQL +EY+LHVQ  Q+  +    ++L T              S K  + ++RE +++  +++TCQ +LRQYGID  +++  L   VAG G                     PP       A P                        SA+G P   +A  C  CGK F++ ++L KHM RRHP
Sbjct:   47 VVPDGNIDNFVKLARLSQLLLEYMLHVQSYQDLRLLSASQELATQKKRIAXXXXXXXXSQKQNKALRREVLRYQTIMSTCQGLLRQYGIDASSLFLQLNTSVAGDG------------------TQQPPXXXXXXXAAP-----------------------VSATGAPDAAIAHTCAECGKVFATSEYLDKHMARRHP 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9215.30594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDB0_ECTSI4.740e-16893.91C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KN09_9PHAE5.760e-13074.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKW3_9STRA3.060e-1330.65C2H2 zinc finger protein n=1 Tax=Tribonema minus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
NoneNo IPR availableCOILSCoilCoilcoord: 297..324
NoneNo IPR availableGENE3D3.30.160.60coord: 187..211
e-value: 1.2E-5
score: 27.5
NoneNo IPR availablePANTHERPTHR21502ZINC FINGER PROTEIN DZIP1coord: 4..327
IPR032714Zinc finger protein DZIP1, N-terminalPFAMPF13815Dzip-like_Ncoord: 4..84
e-value: 2.7E-12
score: 46.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 188..209
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 186..209
score: 9.785

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9215contigEcto-sp8_S_contig9215:2..7307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9215.30594.1mRNA_Ecto-sp8_S_contig9215.30594.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9215 2..7307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9215.30594.1 ID=prot_Ecto-sp8_S_contig9215.30594.1|Name=mRNA_Ecto-sp8_S_contig9215.30594.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1071bp
MSAQVAFCEVSAEDIPPTGVDDLSVKLIRLSQLTIEYLLHVQECQEGYIQ
GLVRQLETANNDNQRLKAYAELSAKDGRRMKRESVQHHHVLNTCQSVLRQ
YGIDPRTIWESLPAEVAGAGGCSGPGAQPKDPRSCLPAAGMPPCGSHKPS
APPPPVEDSGVAQEGHNCGAAAGGGGTSASGTPVARVCGACGKAFSSEQF
LRKHMDRRHPDLVRQDTAPLAEKEEAKYDSPASTPLPPPEEEARATEEQP
SPPQHQEEAAGGKGTGSEDKGGGENGIGSEVVEGARRLGELVREREHARF
KLEVVALRREVEDLKRKGEAMQCLPQQQPQPQPQPQPQPQPQPSPPPTPS
PSPSMTLPPRGGDGDRRRRRVRGIISIRRILREQDRRRKERAMDKWRASV
AITTTTTITTVAPPVPQPQPPTPKQPIRRWGLDELLLMAHRRADRAAQEA
VRGKGARVEGSQPSHGKGAHALRLTSGVEIGAHFPVDKQQAEEAREEVVR
ELRERARSYGVDAERARMSGAEYQAKLGQVLAKRHESVVESPSTAATGLD
DAYALVAKELRLAGTARENNANSNNANTGSSRGSVHRIPSMEGGRLGHRL
LSSFPRPDSSGGAASTAATAFSRGSRLDMPSKLEPGVSSFSQTIGGGGSG
SGGGSTAPLVTSRWQPPRSGGGGPTGKHTTGARTGLGDGNAVEGGVREGI
GLGWGDGGGVDSKEMLAIAKRTAEINWEAVKRRRSASEAAKAAAASTSAT
TVSGSNVDRVCRQGEISRTTAAAADLSTPTAKAVTTTTASGTSLCTVPSP
ASETPGVAAQNSVVVSSWQRPTSTTTADTLGSERNTLGDESLVPRGVLAT
EARETTNIVIQVGSRSANRRNDVLANSSGQDEEKEEKNDCDGDVGTDIMV
KAPYNSGVDAGAGASHNRRAVTDATSDTKQAQGGWAFATSAVSGAEIDRG
TGEPAAAVAAVGLFRKDKRPQLSNALSFSDDEEEGEGSGDNNGGNNHSRT
GDAAVVNTAGGGATSRPDDSLASSIPAKTHIRPMPSFSSSDASVVDEQLL
EDFGEDRPRLSSAKQLPDKSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032714DZIP1_N
IPR013087Znf_C2H2_type