prot_Ecto-sp8_S_contig9213.30592.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9213.30592.1
Unique Nameprot_Ecto-sp8_S_contig9213.30592.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length506
Homology
BLAST of mRNA_Ecto-sp8_S_contig9213.30592.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 736 bits (1901), Expect = 5.710e-256
Identity = 433/505 (85.74%), Postives = 441/505 (87.33%), Query Frame = 0
Query:    1 MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVVSFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSAN-KPALSSSSRAVSDSLSFSRRSHRDGGGRGGADDGRGGSASPLSSSVKSILEATGACSIRTVGGIGXXXXXXATRSTWESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGSRSGKASPKARAGGTDGASTTILDGSKFATFAGDAVDVDTLLEEGAHRDGGSDXXXXXXXXXXXGLDXXXXXXXXXXXXXXXXXXXXARSMSSTFWGAEQEKDHQRRGSSQASTEMQESLTRVEAENA 504
            MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYI QWRHALGMCLNLIGV YYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDV+SFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAK+FFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSAN KPALSSSSRAVSDSLSFSRRSHRDGGGRGGA+DGRGGSASPLSS VKSILE TGA SIRT+G +G      A+R T E                           XXXXXX            ARAGG DGASTTILDGSKFATFAGDAVDVDTLLEEGA  DGGSD  XXXX     GLDXXXXXXXXXXXXXXXXXXXXARSMSSTFWGAEQEKDHQRRGSSQASTEMQESL+R+EAENA
Sbjct:  442 MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYIRQWRHALGMCLNLIGVAYYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVISFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKLFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSANNKPALSSSSRAVSDSLSFSRRSHRDGGGRGGAEDGRGGSASPLSSRVKSILETTGASSIRTIGEVGGVGGG-ASRLTRELGGGAGPAASLSSSGRSYGDGGEGAASXXXXXXXXXXXXXXXXXXARAGGKDGASTTILDGSKFATFAGDAVDVDTLLEEGARGDGGSDSGXXXXDGEGGGLDXXXXXXXXXXXXXXXXXXXXARSMSSTFWGAEQEKDHQRRGSSQASTEMQESLSRMEAENA 945          
BLAST of mRNA_Ecto-sp8_S_contig9213.30592.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 717 bits (1850), Expect = 1.650e-246
Identity = 412/508 (81.10%), Postives = 425/508 (83.66%), Query Frame = 0
Query:    1 MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVVSFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSAN-KPALSSSSRAVSDSLSFSRRSHRDGGGRGGADDGRGGSASPLSSSVKSILEATGACSIRTVGGIGXXXXXX---ATRSTWESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGSRSGKASPKARAGGTDGASTTILDGSKFATFAGDAVDVDTLLEEGAHRDGGSDXXXXXXXXXXXGLDXXXXXXXXXXXXXXXXXXXXARSMSSTFWGAEQEKDHQRRGSSQASTEMQESLTRVEAENA 504
            MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPE RPTWAYPLGGFLIAYFCVQASL MIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFY+ILQASRVVILWNVLHRLGSTSSEVA RLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDV+SFASLHQSFAAMTD++MLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSAN KPALSSSSRA+  SLSFSRRS RDGGGRGGA+DGRGG ASPLSS VKS+LE TGA SIRT+G  GXXXXXX   A+RST E                    XXXXXXXX     MAGSRS KA+PKAR  G DGAST ILDGS+FAT AGDAVDVDTLLE+GAH  GGSD           GLD                    ARSMSSTFWGAEQEKDHQRRGS QASTEMQE+L RVEAENA
Sbjct:  575 MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPEGRPTWAYPLGGFLIAYFCVQASLRMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYKILQASRVVILWNVLHRLGSTSSEVARRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVLSFASLHQSFAAMTDIVMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSANNKPALSSSSRAIPHSLSFSRRSPRDGGGRGGAEDGRGGPASPLSSRVKSVLETTGASSIRTIGETGXXXXXXXXXASRSTGE-LGGAGPAASPSSSGRSYGDXXXXXXXXGAVGDMAGSRSRKATPKARTVGNDGAST-ILDGSQFATLAGDAVDVDTLLEQGAHGYGGSDRGGEDGNGEDCGLDDDDGSFSSDESSAPVVVTSHARSMSSTFWGAEQEKDHQRRGSLQASTEMQENLNRVEAENA 1080          
BLAST of mRNA_Ecto-sp8_S_contig9213.30592.1 vs. uniprot
Match: D7FGS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS1_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 2.560e-95
Identity = 151/246 (61.38%), Postives = 192/246 (78.05%), Query Frame = 0
Query:   19 VQGYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVVSFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSANKP 264
            + GYQIV  GD+PE RP WAYPLG  LI YFC+QA+L MI  G R Y ++WR+ L M LN++G+ YY  LW  G  +HSFYQILQA R+ +LW  LH LG TSS+VATRLEFVFPAV+RASFVLF++TY+Y+V+A+ MYC+TPLG EP+  + D SM++R+A  K+V +FA+L +S+A+M  V+M SNWP+FMDAAG VGN+V AK+FFYSFK + FYFVMPV+LGFIV SYM AH+P  +   KP
Sbjct:  105 LDGYQIVRAGDNPEGRPAWAYPLGAVLIFYFCLQAALRMIAGGVRPYFLEWRNILEMSLNMVGIAYYAQLWPRGQAFHSFYQILQALRLELLWINLHLLGPTSSDVATRLEFVFPAVIRASFVLFALTYTYAVVAYAMYCSTPLGGEPIGDLKDDSMVKRFAAVKEVANFATLPRSYASMMYVVMFSNWPMFMDAAGVVGNLVVAKVFFYSFKAIGFYFVMPVLLGFIVTSYMNAHVPTVEDPPKP 350          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9213.30592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FR41_ECTSI5.710e-25685.74Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A6H5L0T6_9PHAE1.650e-24681.10Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FGS1_ECTSI2.560e-9561.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..505
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 71..90
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9213contigEcto-sp8_S_contig9213:455..7303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9213.30592.1mRNA_Ecto-sp8_S_contig9213.30592.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9213 455..7327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9213.30592.1 ID=prot_Ecto-sp8_S_contig9213.30592.1|Name=mRNA_Ecto-sp8_S_contig9213.30592.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=506bp
MPGSNFPLSRQVLNVAVVVQGYQIVLEGDDPERRPTWAYPLGGFLIAYFC
VQASLWMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYQ
ILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYS
VLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVVSFASLHQSFAAMTD
VIMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSY
MAAHIPGADSANKPALSSSSRAVSDSLSFSRRSHRDGGGRGGADDGRGGS
ASPLSSSVKSILEATGACSIRTVGGIGGGGGGGATRSTWESGGGAGPAAS
RSSSGRSYGDGAEGAGSGGAVGDMAGSRSGKASPKARAGGTDGASTTILD
GSKFATFAGDAVDVDTLLEEGAHRDGGSDSGGEDGNGEEGGLDDDDGSSS
SDDSSAPVVVTSQARSMSSTFWGAEQEKDHQRRGSSQASTEMQESLTRVE
AENAR*
back to top