prot_Ecto-sp8_S_contig92111.30591.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92111.30591.1
Unique Nameprot_Ecto-sp8_S_contig92111.30591.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
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BLAST of mRNA_Ecto-sp8_S_contig92111.30591.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 2.530e-33
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:    1 RHPKFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFA 63
             + +FLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHH+LNNLVVPNVVEFA
Sbjct:   50 EYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFA 112
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BLAST of mRNA_Ecto-sp8_S_contig92111.30591.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 4.760e-33
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:    1 RHPKFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHVLNNLVVPNVVEFA 63
             + +FLVSWIPFYWLGKCLGLGLLYLPGGNIPTV+FERVVVWGMDNAHHVLNNLVVPNVVEFA
Sbjct:   50 EYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFA 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92111.30591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDS5_ECTSI2.530e-3392.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYY1_9PHAE4.760e-3392.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004345TB2/DP1/HVA22-related proteinPFAMPF03134TB2_DP1_HVA22coord: 5..40
e-value: 1.2E-6
score: 28.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..63
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92111contigEcto-sp8_S_contig92111:146..334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92111.30591.1mRNA_Ecto-sp8_S_contig92111.30591.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92111 146..334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92111.30591.1 ID=prot_Ecto-sp8_S_contig92111.30591.1|Name=mRNA_Ecto-sp8_S_contig92111.30591.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
RHPKFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHV
LNNLVVPNVVEFA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004345TB2_DP1_HVA22