prot_Ecto-sp8_S_contig91829.30534.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig91829.30534.1
Unique Nameprot_Ecto-sp8_S_contig91829.30534.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: D8LN25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN25_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.860e-47
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGRAGGG 90
            MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFP+PAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK ASAGRAGGG
Sbjct:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPDPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKGASAGRAGGG 90          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: A0A6H5LEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEZ0_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.280e-46
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGRAGGG 90
            MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGR G G
Sbjct:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGRGGVG 90          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: A0A835YV72_9STRA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV72_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.150e-31
Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    4 SSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAM 76
            S +DELQRL+L+SKVCTELDNHLGLSDRTLAEFIIHLA EFPEPAAFR AL+ENGAEFP +L DNLLRII  M
Sbjct:    2 SELDELQRLALISKVCTELDNHLGLSDRTLAEFIIHLAAEFPEPAAFRSALAENGAEFPGALCDNLLRIIKLM 74          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: A0A7S2DM33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DM33_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.390e-27
Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    6 IDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAG 85
            +DEL  L L+SKVC ELDNHLGLSD+TLAEFI+H+A E      F + L+ENGAEFP +LA+++ R+I AMKPSKA+S+G
Sbjct:    1 MDELVHLQLISKVCNELDNHLGLSDKTLAEFIVHIAGEVKSSTDFNEKLAENGAEFPSALAESIWRLIQAMKPSKASSSG 80          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: UPI001D0027B0 (ATP-dependent RNA helicase DHX8-like isoform X1 n=2 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D0027B0)

HSP 1 Score: 106 bits (264), Expect = 9.190e-25
Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK 80
            +++  I++L+ LSLVSK+CTEL+NHLGL+D+ LAEFIIHLA E P P  F+QAL ENG E  DS  DNLLRII  MKPSK
Sbjct:    2 VLNDDIEKLEYLSLVSKICTELENHLGLNDKDLAEFIIHLATENPTPNGFKQALRENGGELSDSFMDNLLRIIQHMKPSK 81          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: W7TCI3_9STRA (Atp-dependent rna helicase dhx8 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCI3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-24
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    4 SSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK 80
            +++D+LQ LSLVSK+CTELD+HLGL+D+TLAEFIIHLA+   +  +FR AL ENGAEFP +  D L  +I AM+P +
Sbjct:    2 AALDKLQELSLVSKICTELDSHLGLADKTLAEFIIHLAESHGDAKSFRTALDENGAEFPPTFCDKLFNLIKAMRPHR 78          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: T1GM52_MEGSC (RNA helicase n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GM52_MEGSC)

HSP 1 Score: 103 bits (256), Expect = 1.110e-23
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    6 IDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAAS 83
            + +L+ LSLVSK+CTELDNHLG++D+ LAEFIIHLADE P    FR+AL  NGAEFPDSL +NLLRII  M+ S   S
Sbjct:    4 LKQLEYLSLVSKICTELDNHLGINDKDLAEFIIHLADENPALTDFRRALESNGAEFPDSLTENLLRIIKLMRSSSGKS 81          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: A0A8J5R9Z7_9HYME (Uncharacterized protein n=2 Tax=Cotesia TaxID=32390 RepID=A0A8J5R9Z7_9HYME)

HSP 1 Score: 102 bits (255), Expect = 1.510e-23
Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 0
Query:    2 VSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK 80
            ++ +I++L+ LSLVSK+CTEL+NHLGL D+ LAEFIIHLA E P P  F+QAL ++G E  DS  DNLLRII  MKPSK
Sbjct:    3 LNDAIEKLEYLSLVSKICTELENHLGLDDKDLAEFIIHLATENPTPDGFKQALRDSGGELSDSFMDNLLRIIQHMKPSK 81          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: A0A813C684_9DINO (Prp22 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C684_9DINO)

HSP 1 Score: 98.2 bits (243), Expect = 2.990e-23
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    2 VSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASA 84
            +SS ++ LQ LSLVSKVC ELD+H+GLSD TLAEFIIHLA E   P +F  A+ ENGA+F DS A +LL  I +M PSK  SA
Sbjct:    1 MSSELERLQHLSLVSKVCQELDDHIGLSDATLAEFIIHLAKEHSTPESFANAVRENGADFGDSFAASLLETIHSMLPSKQGSA 83          
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Match: UPI001C4BCA0F (ATP-dependent RNA helicase DHX8-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4BCA0F)

HSP 1 Score: 93.6 bits (231), Expect = 3.540e-23
Identity = 47/85 (55.29%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    2 VSSSIDELQRL---SLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAAS 83
            +++++DE++RL   SLVSKVCTEL+NHLG+S++ LAEFII+LA++ P    F+ AL ENGAEF D+L  NLLR+I  M+P  + S
Sbjct:    1 MAAALDEIKRLEYLSLVSKVCTELENHLGISEKDLAEFIINLAEKHPTFETFKAALGENGAEFTDTLIGNLLRLIQTMRPRPSTS 85          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91829.30534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN25_ECTSI1.860e-4797.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LEZ0_9PHAE1.280e-4697.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV72_9STRA4.150e-3183.56Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A7S2DM33_9STRA2.390e-2762.50Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI001D0027B09.190e-2565.00ATP-dependent RNA helicase DHX8-like isoform X1 n=... [more]
W7TCI3_9STRA1.050e-2459.74Atp-dependent rna helicase dhx8 (Fragment) n=1 Tax... [more]
T1GM52_MEGSC1.110e-2365.38RNA helicase n=1 Tax=Megaselia scalaris TaxID=3616... [more]
A0A8J5R9Z7_9HYME1.510e-2363.29Uncharacterized protein n=2 Tax=Cotesia TaxID=3239... [more]
A0A813C684_9DINO2.990e-2361.45Prp22 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
UPI001C4BCA0F3.540e-2355.29ATP-dependent RNA helicase DHX8-like n=1 Tax=Plect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig91829contigEcto-sp8_S_contig91829:31..300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig91829.30534.1mRNA_Ecto-sp8_S_contig91829.30534.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig91829 7..300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig91829.30534.1 ID=prot_Ecto-sp8_S_contig91829.30534.1|Name=mRNA_Ecto-sp8_S_contig91829.30534.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=90bp
MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAF
RQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGRAGGG
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