prot_Ecto-sp8_S_contig9178.30526.1 (polypeptide) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 3.620e-186 Identity = 289/334 (86.53%), Postives = 297/334 (88.92%), Query Frame = 0
Query: 1 MDGVFEEEGDGGHAEEEDVLGGRGGGVGAGATVLDSVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACRSRLLFIHDAAARLSNDAERERLDQVRRXXXXXXXXXXXXDENLMFFNTF 334
MDGVFEEEG+GGHAEEE VLGG +GAGATVLDSVLWKLGFDK FHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLD+S+PTERKVDE VSASISARDLFDKLCEAWQT+NLTKNK+VPDWRRF+SW SALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIR NLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRL+RDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA LFIHDA XXXXXXXXXXXX ENLMFFNTF
Sbjct: 1 MDGVFEEEGEGGHAEEEGVLGGXXXXIGAGATVLDSVLWKLGFDK-----FHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA-----LFIHDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLMFFNTF 324
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: H3GD40_PHYRM (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD40_PHYRM) HSP 1 Score: 148 bits (373), Expect = 2.160e-36 Identity = 85/265 (32.08%), Postives = 151/265 (56.98%), Query Frame = 0
Query: 28 GAGATVLD-SVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDK 282
G+GAT + S++W+ G + RD R+ A + + + +A ++V+ ML S+P ER+ DEP S +SARDLF E +++ WR +++ +C D + MV K+ + +P +YVV+M K+V++++ + +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K
Sbjct: 310 GSGATTDERSLVWRFGVTQ-----LLRDLRHKACIKFATENI--NAVAGVIVEAMLQHSSPREREKDEPTSFPVSARDLF----EMESVKKALPSEANNPWRLLLNYIMVMCRDKSGMVMKV-SQEAFDPTQARSGDGGQYVVHMQKIVEFLQQATTRAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQTRIAERVQDSLCRLRRRRKFEAEENK 562
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A0W8C9C8_PHYNI (DNA-directed RNA polymerase III subunit RPC3 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9C8_PHYNI) HSP 1 Score: 148 bits (373), Expect = 3.450e-36 Identity = 91/281 (32.38%), Postives = 151/281 (53.74%), Query Frame = 0
Query: 11 GGHAEEEDVLGGRGGGVGAGATVLDSVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDK 282
GG ED G G T S++W+ G + RD R+ A + + + +A ++V ML SAP ER+ DEP SA +SARDLF+ N ++ WR +++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ V E + ++ +R RRKF +K
Sbjct: 361 GGETSGEDAPDGSGA-----HTDERSLVWRFGVTQ-----LLRDLRHKACIRFATENI--NAVAGVIVTAMLQHSAPREREKDEPTSAPVSARDLFNME----SVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPIQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENK 624
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A0P1AWK6_PLAHL (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK6_PLAHL) HSP 1 Score: 147 bits (370), Expect = 7.380e-36 Identity = 90/311 (28.94%), Postives = 161/311 (51.77%), Query Frame = 0
Query: 32 TVLDSVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIP--------GSDTQNPRYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACRSRLLFIHDAAARLSNDAERERLDQVRRXXXXXXXXXXXXDENLMFFNTF 334
T S++W+ G + RD R+ + + + +A ++V+ ML S+P ER+ DE SA +SARDLF+ ++S WR +++ + +C D + M+ K+ + +YVV+M K+V++++ V +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K +R + +L + ++ D++ R D LM F F
Sbjct: 349 TDETSLVWRFGMTQ-----MLRDLRHKTCIRFASENI--NAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFNME----SVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKYGVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIAR-------SEQLVEALDIDKFDKLSRSLDRLDRAIIHLDGMLMLFRDF 641
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A3R7FY14_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY14_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.090e-35 Identity = 94/317 (29.65%), Postives = 164/317 (51.74%), Query Frame = 0
Query: 28 GAGATVLD--SVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACRSRLLFIHDAAARLSNDAERERLDQVRRXXXXXXXXXXXXDENLMFFNTF 334
G+ A +D S++W+ G + RD R+ A + + + +A ++V ML SAP ER+ DEP+SA +SARDLF N ++S WR +++ +C D + MV K+ D R YVV+M K+V++++ +D++G +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L +++V +QE+PKRAD NP TF+ W++ + + E + ++ +R RRKF +K +R + +L + ++ D++ R D LM + F
Sbjct: 353 GSSAVDMDERSLVWRFGVTQ-----LLRDLRHKACIKFATENI--NAVAGVIVAAMLQHSAPREREKDEPISAPVSARDLFGME----SVKNALPSESNNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPSQARSGDGGQYVVHMQKIVEFLQQVTTHAYIQDKFGAASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYGEKLVKMQEIPKRADHNPAFTFFCWSVDVPHMQTRITERVQDSLCRLRRRRKFEAEENKELIAR-------SEQLVEGNDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 651
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP) HSP 1 Score: 144 bits (362), Expect = 6.800e-35 Identity = 90/286 (31.47%), Postives = 152/286 (53.15%), Query Frame = 0
Query: 11 GGHAEEEDVLGGRGGGVGAGATVLDSVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPD-----WRRFISWTSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDK 282
GG ED G G T S++W+ G + RD R+ A + + + +A ++V ML S+P ER+ DEP S +SARDLFD + K++P WR +++ +C D + MV K+ + +P +YVV+M K+V++++ +D+YG +ARI+ +L++ + L+Q+ +GE+A++P +DAR RLY L D+++ +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RRKF +K
Sbjct: 292 GGETSGEDAPDGSGA-----HTDERSLVWRFGVTQ-----LLRDLRHKACIRFATENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARDLFDME---------SVKKALPPEANNPWRLLLNYIMVMCRDKSGMVMKV-AQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENK 555
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.420e-33 Identity = 90/279 (32.26%), Postives = 150/279 (53.76%), Query Frame = 0
Query: 12 GHAEEEDVLGGRGGGVGAGATVLDSVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDK 282
G +++ D G G GA +++W+ G D+ RD R+ A + + + +A ++V ML S+P ER+ DE S ++AR+LF S L K+ S WR +++ + +C D + MV K+ D R YVV+M K+V ++R +D++G +ARI+ +L++ + L+QQ +GE+A++P +DAR RLY L +R+V +QEVPKRAD NP T Y W++ ++ + V E + ++ +R RRK +K
Sbjct: 353 GESDDADAPAGMAAG---GALAEQALVWRFGADQ-----LMRDLRHAACVRFATENI--NTVAGVIVAAMLQHSSPHEREKDEATSYPVTARELFAVPAVK---SALPKD-SKDTWRLLLNYITVMCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNK 617
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A662YGR9_9STRA (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGR9_9STRA) HSP 1 Score: 138 bits (347), Expect = 9.690e-33 Identity = 86/265 (32.45%), Postives = 150/265 (56.60%), Query Frame = 0
Query: 36 SVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPDWRRFISWTSALCTDLTSMVSKIPGSDTQNP---------RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKA--CRSRLL 289
S++W+ G + RD R+ A + + + +A ++V ML S+P ER+ DEP S +SAR+LF E+ +++ L + P WR +++ +C D + MV K+ +T +P +YVV+M K+V+++R +D++G +ARI+ +L++ + L+Q+ +GE+A++P +D R RLY L +++V +QEVPKRAD NP TF+ W++ ++ V E + ++ +R RRK +K RS LL
Sbjct: 364 SLVWRF-----GAAQLLRDLRHKACIKFASENI--NAVAGVIVAAMLQHSSPREREKDEPTSFPVSARELF--AMESVKSA-LPPESNNP-WRLLLNYIMVMCRDKSGMVMKV-SQETFDPNQTRAGDGGQYVVHMQKIVEFLRQATTHAYVQDKFGVASARIVRLLVEKRQLEQKAIGELALLPSNDVRRRLYELFAEKLVKMQEVPKRADHNPALTFFCWSVDVPRMQARVAERIQDSVCRLRRRRKAEADENKELIARSELL 616
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A484E8N6_BRELC (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8N6_BRELC) HSP 1 Score: 135 bits (340), Expect = 9.460e-32 Identity = 90/315 (28.57%), Postives = 162/315 (51.43%), Query Frame = 0
Query: 36 SVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPD-----WRRFISWTSALCTDLTSMVSKIPGS--DTQNPR------YVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACRSR---LLFIHDAAARLSNDAERERLDQVRRXXXXXXXXXXXXDENLMFFNTF 334
S++W+ G + R+ R+ A + + + +A ++V ML+ S+P ER+ +E SA +SARDL++ T K++P WR +++ + +C D + M+ K+ D+ R YVV+M K+V++++ +DR+G +ARI+ +L++ + L+Q+ +GE+A++P ++AR RLY L D++V +QE+PKRAD NP TF+ W++ Q+ + E + ++ +R RR F +K +R L+ HD ++ D++ R D LM F F
Sbjct: 358 SLVWRFGMTQ-----MLRELRHKACIRFATENV--NAVAGVIVTAMLEHSSPRERESNESTSAPVSARDLYNME---------TVKKALPSEANNPWRLLLNYITVMCRDKSGMMMKVAQETFDSTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDRFGVASARIVRLLIEKRQLEQKTIGELALLPSNEARHRLYELYTDKLVKMQEIPKRADHNPAFTFFCWSVDIPQMHVRITERVQGSLCRLRRRRTFEAEENKELIARSEQLVEAHDL----------DKFDKLSRSLDRLDRAIIQLDGMLMLFRDF 646
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Match: A0A024GFJ4_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GFJ4_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.400e-31 Identity = 85/314 (27.07%), Postives = 170/314 (54.14%), Query Frame = 0
Query: 32 TVLD--SVLWKLGFDKGGGSAFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDSSAPTERKVDEPVSASISARDLFDKLCEAWQTSNLTKNKSVPD-WRRFISWTSALCTDLTSMVSKIPG-----SDTQNP---RYVVNMAKMVQYIRSNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLLRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKACRSRLLFIHDAAARLSNDAERERLDQVRRXXXXXXXXXXXXDENLMFFNTF 334
T +D S++W+ G D+ R+ R+ A + + + +A ++V ML S ER+ +EP S ++AR+++ K+ E Q K + D WR +++ + + D + M++++ + TQ +YVV+M + Y++ + +D++G ++ARI+ ++L+ + L+Q+ +GE+A++P ++AR RLY L RD+++ +QE+PKR+D NP T Y W++ + +V+ E + ++ +R RR F+ +K +R +++L + + E+ D++ + DENLM + F
Sbjct: 353 TEMDEKSLVWRCGTDQ-----LLRELRHDAFVRFAMENV--NHVAGVIVSAMLSYSMSHERESNEPTSFPMTAREIY-KVDEVKQALP----KEIKDTWRLLLNYLAVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKFGVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIAR-------SSQLVEENDLEKFDKLSQGLDRLDRSILQLDENLMLYRDF 647 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9178.30526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp8_S_contig9178.30526.1 ID=prot_Ecto-sp8_S_contig9178.30526.1|Name=mRNA_Ecto-sp8_S_contig9178.30526.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=335bpback to top |