prot_Ecto-sp8_S_contig9164.30506.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9164.30506.1
Unique Nameprot_Ecto-sp8_S_contig9164.30506.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length963
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9164.30506.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 9.200e-213
Identity = 337/400 (84.25%), Postives = 341/400 (85.25%), Query Frame = 0 
Query:  519 MGTVPIARLGSHAEGVFVVITDAGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLRPPTDNNAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGTFLELSEMEKGRLGQLEEDDSGSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDPPTVVATGCDDESGVGGHDGERVREGPVDIASDAGPDGGNDAHITAANQAKAIQSNSNXXXXXXXXVPPTRLCVCCGGEGGRGHGRKCEHTFRRCGFCRVEEVRRVLRIRAPGRTREPVQESMVVRVLSLPQLKVADDQXXXXXXXXFEWVTDXXXXXPEFECDSCGRVIEDTADRFHCETCGDYDLCQ 918
            MGTVPIARLGSHAEGVFVV+TD GRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATL PPTDN AFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGT LELSEMEKGRLGQLEEDD+GSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDP TVVATGCDDES VGGHDGERVREGPV I S+ G DG ND HIT ANQAK                            GGRGHGRKCEHTFRRCGFCRVEEVRRVL IRAPGRTREPVQESMVVRV SLPQLK  DDQ        FEWVTD     PEFECDSCGRVIEDT+DRFHCETCGDYDL Q
Sbjct:    1 MGTVPIARLGSHAEGVFVVVTDGGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGTLLELSEMEKGRLGQLEEDDNGSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDPTTVVATGCDDESAVGGHDGERVREGPVHIVSNEGQDGENDPHITTANQAK----------------------------GGRGHGRKCEHTFRRCGFCRVEEVRRVLGIRAPGRTREPVQESMVVRVPSLPQLKFGDDQDDDNEEEDFEWVTDSDEEDPEFECDSCGRVIEDTSDRFHCETCGDYDLMQ 372
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9164.30506.1 vs. uniprot
Match: A0A6H5KMB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB6_9PHAE)

HSP 1 Score: 582 bits (1499), Expect = 1.910e-198
Identity = 302/358 (84.36%), Postives = 316/358 (88.27%), Query Frame = 0 
Query:  219 MVKVTGGKLTLSLLQPSRAAPSTGGTTRPNGLRGRGAATANGSGVHSTAGDPGRGEMRRSLSLVASWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNASNANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKSKGDPASAVPGTGMSGALVVVGG-------ASSRTVPREGSEIFGGGEPSRTSRVFVRDEGGVLRVEVVEAERKNGGRSKSGLSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQVSIVVDDGRDGRGGQHDRNNVLKIKPRLAIISDLPLPYWMGTVPIARLGSHAEGVFVVITDAGRRLLIEARDFERGPLLAKSTVSLEDWT 569
            MVK TGG+LTLSL QPSRAAPSTGGTTRP G+RGRGAA ANGSGVHSTAGDPGR  MRRSL+LVA+WADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNA NANETPV+H RRRTTKEAFLHF PILSSVTR VGKS G P S+V GTG                  SSRT PR GSEIFGG E SRTSRV VRDEGGVLRVEVVEAERKN GRSKSG+S+LD+AFGKE+WRETGL ELLWLDCSCRQYLALRLAQQV+IVVDD RDGRGGQHD++NVLKIKPRL IISDLPLPYWMGTVPIARLGSHAEGVFV+ITDAGRRLLIEARDFE GPLLAKSTVSLEDWT
Sbjct:    1 MVKATGGELTLSLFQPSRAAPSTGGTTRPAGVRGRGAAAANGSGVHSTAGDPGRAAMRRSLTLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNAPNANETPVRHRRRRTTKEAFLHFHPILSSVTRDVGKSSGAPGSSVRGTGXXXXXXXXXXXXXXXXXTSSRTAPRGGSEIFGGEETSRTSRVLVRDEGGVLRVEVVEAERKNVGRSKSGVSMLDQAFGKESWRETGLGELLWLDCSCRQYLALRLAQQVAIVVDDDRDGRGGQHDQDNVLKIKPRLVIISDLPLPYWMGTVPIARLGSHAEGVFVMITDAGRRLLIEARDFEGGPLLAKSTVSLEDWT 358
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9164.30506.1 vs. uniprot
Match: D7FSK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK7_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 2.940e-122
Identity = 196/214 (91.59%), Postives = 199/214 (92.99%), Query Frame = 0 
Query:  275 MRRSLSLVASWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNASNANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKSKGDPASAVPGTGMSGALVVVGGASSRTVPREGSEIFGGGEPSRTSRVFVRDEGGVLRVEVVEAERKNGGRSKSGLSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQVSIVVDDGR 488
            MRRSLSLVA+WADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFR   RGFEEKNA  ANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKS GDP SAVPGTG SGALVVVGGASSRTVPREGSEIFGGGE SRTSRVFVRDEGGVLRVEVVEAERKNGGR KSG+SILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQ+S     GR
Sbjct:    1 MRRSLSLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFR---RGFEEKNAPTANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKSNGDPGSAVPGTGGSGALVVVGGASSRTVPREGSEIFGGGETSRTSRVFVRDEGGVLRVEVVEAERKNGGRPKSGVSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQLSSWPASGR 211
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9164.30506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSK6_ECTSI9.200e-21384.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMB6_9PHAE1.910e-19884.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK7_ECTSI2.940e-12291.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 886..932
e-value: 0.003
score: 26.3
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 889..931
e-value: 8.2E-7
score: 28.7
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 886..934
score: 10.846
NoneNo IPR availableGENE3D3.30.60.90coord: 886..950
e-value: 7.2E-8
score: 34.2
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 889..951

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9164contigEcto-sp8_S_contig9164:60..6545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9164.30506.1mRNA_Ecto-sp8_S_contig9164.30506.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9164 60..6545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9164.30506.1 ID=prot_Ecto-sp8_S_contig9164.30506.1|Name=mRNA_Ecto-sp8_S_contig9164.30506.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=963bp
MQTVVEREGRGGLRVRSKTRPPGPERVYDIVAQPEDWVNLGHPSLPWLND
KRTSSLAQELTRCVRAGDGSLVLRIGDRRMRPACFFPVPSSLRDNTHSSR
ASSGPPATADAAVAERRSNDRFEHNGDDSRVPSPCKSGAPPGLCCCRVVL
RSGVSLPLSIPEPAESVTDNAADIDSNDDDDNSDRNTTTSETRAARSSRR
SSSSSSSSGGSGTSRWLVMVKVTGGKLTLSLLQPSRAAPSTGGTTRPNGL
RGRGAATANGSGVHSTAGDPGRGEMRRSLSLVASWADWAEAGYGPLQWMS
HEQKVFIARLSLYWVSFRTPARGFEEKNASNANETPVQHHRRRTTKEAFL
HFRPILSSVTRVVGKSKGDPASAVPGTGMSGALVVVGGASSRTVPREGSE
IFGGGEPSRTSRVFVRDEGGVLRVEVVEAERKNGGRSKSGLSILDEAFGK
EAWRETGLEELLWLDCSCRQYLALRLAQQVSIVVDDGRDGRGGQHDRNNV
LKIKPRLAIISDLPLPYWMGTVPIARLGSHAEGVFVVITDAGRRLLIEAR
DFERGPLLAKSTVSLEDWTATTGIATLRPPTDNNAFKKILEEQLAALLGA
GFRSRTSRLERKRAAREAQQQGGGVRWRGTFLELSEMEKGRLGQLEEDDS
GSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKH
GRSRRRGGGGRRRREKRGVGAPAPGDARDPPTVVATGCDDESGVGGHDGE
RVREGPVDIASDAGPDGGNDAHITAANQAKAIQSNSNNDDNTNNTVPPTR
LCVCCGGEGGRGHGRKCEHTFRRCGFCRVEEVRRVLRIRAPGRTREPVQE
SMVVRVLSLPQLKVADDQDDDDEEEEFEWVTDSDEEEPEFECDSCGRVIE
DTADRFHCETCGDYDLCQACCLSHKVAKEHNSKHEGDATERHDASHSMTR
IMGEPAVPGRLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ