prot_Ecto-sp8_S_contig91623.30504.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig91623.30504.1
Unique Nameprot_Ecto-sp8_S_contig91623.30504.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A6H5K6R3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6R3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.710e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37
            MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV
Sbjct:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELV 37          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A660UMP8_9BACT (30S ribosomal protein S16 n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A660UMP8_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 1.310e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYW 40
            M VR+RLQR GRRNRPFYRVVVADSR+PRDGK+IE + Y+
Sbjct:    1 MPVRIRLQRAGRRNRPFYRVVVADSRSPRDGKYIEKIGYY 40          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A2H5YJA8_9BACT (30S ribosomal protein S16 n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YJA8_9BACT)

HSP 1 Score: 64.7 bits (156), Expect = 2.390e-12
Identity = 27/38 (71.05%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    3 VRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYW 40
            +R+RL R+GRRNRPFYR+VVAD+RAPRDGKF+E++ Y+
Sbjct:    2 LRIRLSRMGRRNRPFYRIVVADARAPRDGKFVEIIGYY 39          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A7C2PIK7_9BACT (30S ribosomal protein S16 n=2 Tax=Caldimicrobium sp. TaxID=2024963 RepID=A0A7C2PIK7_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 2.850e-12
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYW 40
            M VR+RL R GRRNRPFYRVVVADSRAPRDGK+I+ + Y+
Sbjct:    1 MPVRIRLMRFGRRNRPFYRVVVADSRAPRDGKYIDKLGYY 40          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A7V6G138_9FIRM (30S ribosomal protein S16 n=1 Tax=Eubacteriaceae bacterium TaxID=2049045 RepID=A0A7V6G138_9FIRM)

HSP 1 Score: 63.9 bits (154), Expect = 2.930e-12
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYWRRSQRPI 47
            M VR+RL+R+G + RPFYR+VVADSRAPRDGKFIE + Y+     P+
Sbjct:    1 MAVRIRLKRMGAKKRPFYRIVVADSRAPRDGKFIEEIGYYNPVSEPV 47          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A660RUT1_9BACT (30S ribosomal protein S16 n=1 Tax=Thermodesulfobacteria bacterium TaxID=2202153 RepID=A0A660RUT1_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 4.480e-12
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYW 40
            M +R+RL R+GRR RPFYRVV ADSRAPRDGKF+E++ Y+
Sbjct:    1 MPIRIRLMRMGRRRRPFYRVVAADSRAPRDGKFLEILGYY 40          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A7Z9ZXM2_9BACT (30S ribosomal protein S16 n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Z9ZXM2_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 5.810e-12
Identity = 27/40 (67.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYW 40
            M VR+RL R+GRRNRPFYR+VVAD++APRDGKF+E++ ++
Sbjct:    1 MPVRIRLMRMGRRNRPFYRIVVADAKAPRDGKFVEIIGHY 40          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A1T4JXJ1_9FIRM (30S ribosomal protein S16 n=1 Tax=Garciella nitratireducens DSM 15102 TaxID=1121911 RepID=A0A1T4JXJ1_9FIRM)

HSP 1 Score: 62.8 bits (151), Expect = 8.170e-12
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYWRRSQRPI 47
            M V++RL+R+G + RPFYR+VVADSRAPRDGKFIE + Y+     P+
Sbjct:    1 MAVKIRLKRMGAKKRPFYRIVVADSRAPRDGKFIEEIGYYNPISEPV 47          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A8J8M6T8_9FIRM (30S ribosomal protein S16 n=2 Tax=Vallitalea TaxID=1348611 RepID=A0A8J8M6T8_9FIRM)

HSP 1 Score: 62.4 bits (150), Expect = 1.160e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYWRRSQRPI 47
            M VR+RL+R+G +  PFYR+VVADSR+PRDGKFIE V Y+  ++ PI
Sbjct:    1 MAVRMRLKRMGAKKAPFYRIVVADSRSPRDGKFIEQVGYYNPTKNPI 47          
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Match: A0A7X8DUH8_9FIRM (30S ribosomal protein S16 n=1 Tax=Epulopiscium sp. TaxID=2384 RepID=A0A7X8DUH8_9FIRM)

HSP 1 Score: 62.0 bits (149), Expect = 1.650e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYWRRSQRPI 47
            M VR+RL+R+G +  PFYR+VVADSRAPRDGKFIE V Y+  ++ P+
Sbjct:    1 MAVRIRLKRMGAKKAPFYRIVVADSRAPRDGKFIEEVGYYDPTKDPV 47          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91623.30504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6R3_9PHAE4.710e-14100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A660UMP8_9BACT1.310e-1277.5030S ribosomal protein S16 n=1 Tax=Candidatus Porib... [more]
A0A2H5YJA8_9BACT2.390e-1271.0530S ribosomal protein S16 n=2 Tax=Bacteria TaxID=2... [more]
A0A7C2PIK7_9BACT2.850e-1275.0030S ribosomal protein S16 n=2 Tax=Caldimicrobium s... [more]
A0A7V6G138_9FIRM2.930e-1261.7030S ribosomal protein S16 n=1 Tax=Eubacteriaceae b... [more]
A0A660RUT1_9BACT4.480e-1270.0030S ribosomal protein S16 n=1 Tax=Thermodesulfobac... [more]
A0A7Z9ZXM2_9BACT5.810e-1267.5030S ribosomal protein S16 n=1 Tax=Armatimonadetes ... [more]
A0A1T4JXJ1_9FIRM8.170e-1259.5730S ribosomal protein S16 n=1 Tax=Garciella nitrat... [more]
A0A8J8M6T8_9FIRM1.160e-1161.7030S ribosomal protein S16 n=2 Tax=Vallitalea TaxID... [more]
A0A7X8DUH8_9FIRM1.650e-1161.7030S ribosomal protein S16 n=1 Tax=Epulopiscium sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 9..41
e-value: 8.5E-13
score: 48.2
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 3..41
e-value: 1.3E-15
score: 55.2
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 1..41
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..46
e-value: 1.7E-16
score: 62.1
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 3..41
NoneNo IPR availablePANTHERPTHR12919:SF2037S RIBOSOMAL PROTEIN S16, MITOCHONDRIALcoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig91623contigEcto-sp8_S_contig91623:169..309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig91623.30504.1mRNA_Ecto-sp8_S_contig91623.30504.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig91623 169..309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig91623.30504.1 ID=prot_Ecto-sp8_S_contig91623.30504.1|Name=mRNA_Ecto-sp8_S_contig91623.30504.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=47bp
MTVRVRLQRLGRRNRPFYRVVVADSRAPRDGKFIELVSYWRRSQRPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf