prot_Ecto-sp8_S_contig9162.30503.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9162.30503.1
Unique Nameprot_Ecto-sp8_S_contig9162.30503.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length704
Homology
BLAST of mRNA_Ecto-sp8_S_contig9162.30503.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 795 bits (2053), Expect = 6.300e-265
Identity = 561/713 (78.68%), Postives = 572/713 (80.22%), Query Frame = 0
Query:    1 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFPIDPFQLGIPWNPGSGGXXXXXXXXRYDGGGVSAAISANRSPVGGGNNAAVYGVPGQVVAPSTVVTRAAAMEGGRLTGGFGALSPKREIEAGGGAGLPRRLLVEPAAPVAAXXXXYSAAA-----RVADLQASTSAAGGLSGAVFGAGSSSAKEGPSVSWQQQQRETGCSETVAA----SAAEALPSMLSPASSSLAIDGAIPGSHGSATGGTNSSGGDGPRQSVLSGLSPATTSVAWHPPAGVPSXXXXXXXXXHGTIPRAPPPTPLLSTXXXXXXXXXXXXXXGVGVGSGPATVAVSAGWEARSRAVEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSAIAGSNDTXXXXXXXGNSTAMELGVVDAGSGGNTFGRSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANISDRDAKAAMYARFLRDPTRATDAGIGSSSVGGGGVTQPAXXXXXXXXXXXXXXXXXXAMVVAARGAGALVSPGVPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGSEASGRAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEV 704
            MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFPIDPFQLGIPWNPGSG XXXXXXXX                       AAVYGVPGQV APSTVV RAAAM+GGRLTGG GALSPKREIEAGGGAGLP RLLVEPAAPVAA    YSAAA       AD    +  AGGLSGAVFGAGSSSAKEGPSVSWQQQQR TG  ETVAA       EALPSMLSPASSSLAI+G IPG+HGS TGGT+SSGGDGPRQ+VLSG SPATTSVAWHP AGV  XXXXXXXXXHGTIPRAPPPTPLLST              GVGVGSGPATVAVSAGWEARSRAVEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSAIAGSNDT       GNSTAMELGVVDAGSG N F RSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          +G+G ++                       XXX  AMVVAARG GA VSPGVPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGSEAS RAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVE+
Sbjct:  346 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFPIDPFQLGIPWNPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVYGVPGQVGAPSTVVARAAAMQGGRLTGGGGALSPKREIEAGGGAGLPGRLLVEPAAPVAAAAAAYSAAAWCGHGSTADRPGYSRRAGGLSGAVFGAGSSSAKEGPSVSWQQQQR-TGRGETVAAVXXXXXXEALPSMLSPASSSLAIEGTIPGNHGSTTGGTDSSGGDGPRQAVLSGPSPATTSVAWHPSAGVXXXXXXXXXXXHGTIPRAPPPTPLLSTTTPPRTTNTAVSVGGVGVGSGPATVAVSAGWEARSRAVEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSAIAGSNDTTAAAAA-GNSTAMELGVVDAGSGVNAFARSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XGSGLGVAA----------------------SXXXNAAMVVAARGTGASVSPGVPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGSEASERAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEM 1033          
BLAST of mRNA_Ecto-sp8_S_contig9162.30503.1 vs. uniprot
Match: A0A6H5KYA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA3_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 5.470e-117
Identity = 360/742 (48.52%), Postives = 367/742 (49.46%), Query Frame = 0
Query:    1 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFPIDPFQLGIPWNPGSGGXXXXXXXXRYDGGGVSAAISANRSPVGGGNNAA--VYGVPGQVVAPSTVVTRAAAMEGGRLTGGFGALSPKREIEAGGGAGLPRRLLVEPAAPVAAXXXXYSAAARVADLQASTSAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGLSGAVFGAGSSSAKEGPSVSWQQQQ-------------------------RETGCSETVAASAAEALPSMLSPASSSLAIDGAIPGSHGSATGGTNSSGGDGPRQSVLSGLSPATTSVAWHPPAGVPSXXXXXXXXXHGTIPRAPPPTPLLSTXXXXXXXXXXXXXXGVGVGSGPATVAVSAGWEARSRAVEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSAIAGSNDTXXXXXXXG-NSTAMELGVVDAGSGGNTFGRSPG 512
            MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPA LPSLTASFPIDPFQLGIPWNPG+G XXXXXXXX                           VYGVPGQV                       ALSPKREIEAGGGAGLP RL+VEPAAPVAA    YSAAARVADLQASTSAA                                                                                                                                                                                                          GGLSG VFGAGSSSAKEGPSVSWQQQ+                         R TGC ET+ A+AAEALPSMLSPASSS+A                                                           GTIPR          XXXXXXXX      GVGVGSGPA VAVS GWEARSRA+EGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLS IAGS   XXXXXXX   STAMEL VVDAGSGGN FGRSPG
Sbjct:  502 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAVLPSLTASFPIDPFQLGIPWNPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYGVPGQVXXXXXXXXXXXXXXXXXXXXXXXALSPKREIEAGGGAGLPGRLMVEPAAPVAAAAAAYSAAARVADLQASTSAAVQMPPSSPRHPGGMPRGSAPPALASLSPGGXXXXXRGDGLLPLSEQLGLPLSALIPSTGEKVGTAGSSSMASPPAATSFAPLTGASFRPPLAXXXXXXXXXXXXXXXXXXXXXXXTMAATSSVATGRVPVAASSAGTQPVLPXXXXXXXXXXXXXXXXXXXXHMLPRIATLDSAKTGYFDASWGAMATEWEEAEARGASGGEGGLSGVVFGAGSSSAKEGPSVSWQQQRETSPLVAAVASQAAAPAVAAQPGALRGTGCGETMPAAAAEALPSMLSPASSSMA-----------------------------------------------------------GTIPRPXXXXXXXXXXXXXXXXXTVASGGGVGVGSGPAAVAVSTGWEARSRALEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSVIAGSXXXXXXXXXXXXGSTAMELRVVDAGSGGNAFGRSPG 1184          
BLAST of mRNA_Ecto-sp8_S_contig9162.30503.1 vs. uniprot
Match: A0A6H5LFU5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFU5_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.390e-51
Identity = 129/165 (78.18%), Postives = 132/165 (80.00%), Query Frame = 0
Query:  549 DRDAKAAMYARFLRDPTRATDAGIGSSSVGGGGVTQPAXXXXXXXXXXXXXXXXXXAMVVAARGAGALV---------SPGVPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGSEASGRAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEV 704
            +RDAKAAMYARFLRDPT ATDAG+ SSSVGGGGVTQ A  XXXXXXXXXXXXXXXX                      SPG PLDVVALGEHLSDEAKALAEEGLFDLVRDAWG EAS RAH YVEEE  PSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVE+
Sbjct:  893 NRDAKAAMYARFLRDPTGATDAGVCSSSVGGGGVTQQAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGAPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGGEASARAHSYVEEEVAPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEM 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9162.30503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHA8_ECTSI6.300e-26578.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA3_9PHAE5.470e-11748.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LFU5_9PHAE1.390e-5178.18Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9162contigEcto-sp8_S_contig9162:127..5902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9162.30503.1mRNA_Ecto-sp8_S_contig9162.30503.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9162 109..5902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9162.30503.1 ID=prot_Ecto-sp8_S_contig9162.30503.1|Name=mRNA_Ecto-sp8_S_contig9162.30503.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=704bp
MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWP
MDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFP
IDPFQLGIPWNPGSGGGSGGGSGGRYDGGGVSAAISANRSPVGGGNNAAV
YGVPGQVVAPSTVVTRAAAMEGGRLTGGFGALSPKREIEAGGGAGLPRRL
LVEPAAPVAAAAAAYSAAARVADLQASTSAAGGLSGAVFGAGSSSAKEGP
SVSWQQQQRETGCSETVAASAAEALPSMLSPASSSLAIDGAIPGSHGSAT
GGTNSSGGDGPRQSVLSGLSPATTSVAWHPPAGVPSTGPPSSGPPHGTIP
RAPPPTPLLSTTTPPRTTNTAASGGGVGVGSGPATVAVSAGWEARSRAVE
GLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDGTATRSHSLSSPT
TSTFSVGTLGVPSPAPSPSNLSAIAGSNDTTAAAAAAGNSTAMELGVVDA
GSGGNTFGRSPGGGGTAAAVAAATPSCSTAGGGEGSAASDAGGGANISDR
DAKAAMYARFLRDPTRATDAGIGSSSVGGGGVTQPAAAAAGSGLGAAASA
AANAAMVVAARGAGALVSPGVPLDVVALGEHLSDEAKALAEEGLFDLVRD
AWGSEASGRAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKA
AVEV
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