prot_Ecto-sp8_S_contig9157.30497.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9157.30497.1
Unique Name	prot_Ecto-sp8_S_contig9157.30497.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	206

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: D7FLE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE0_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.010e-92
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0

Query:    1 MPNSNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            MPNSNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYK+ +  S
Sbjct:    1 MPNSNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAISVS 204

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A6H5JC61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC61_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 6.120e-86
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 0

Query:    1 MPNSNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            MPN+NAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX   ATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYK+ +  S
Sbjct:    1 MPNNNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAISVS 204

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.620e-46
Identity = 81/194 (41.75%), Postives = 103/194 (53.09%), Query Frame = 0

Query:    6 AFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKV 199
            +F+  +D +D VCPLCCE +DLSDKNF+PC CGYRVC+WCWH IK++  GLCPACR+ Y+DDPHAFAAVD+++VIK+E  K                                                                 +A +  L ++ +VQRNLVY  GLP    SEE +RRPE FGQ+GKI KV
Sbjct:    2 SFDSDNDSEDDVCPLCCEELDLSDKNFLPCQCGYRVCIWCWHTIKDHMNGLCPACRNPYSDDPHAFAAVDRDDVIKSEKRKRR---------------------------------------------------------------LARQHALLHLPLVQRNLVYVVGLPPVAASEEYIRRPEWFGQFGKINKV 132

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A7S1C198_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C198_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.220e-44
Identity = 98/191 (51.31%), Postives = 117/191 (61.26%), Query Frame = 0

Query:   14 DDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            D+ VCPLCCE +D+SDK F PC CGY+VCMWCWHRI+EN  GLCPACR+ Y DDPH F+A+D EEV++    K       XXXXXXXXXX            XX     XXXX                   V G T   +R +LANMRV++RNLVYA GLP    S+++LRR E+FGQYG+I KV L  S
Sbjct:    3 DNEVCPLCCEELDISDKQFFPCKCGYQVCMWCWHRIRENENGLCPACRTPYGDDPHEFSAIDMEEVVRANKEKAAAEKREXXXXXXXXXXRTNGDGAGSRPPXXAYSNGXXXXGDTDGNNHHSSLSL-----VSGPTPPRDRSQLANMRVIRRNLVYAVGLPPSSASDDMLRRSEHFGQYGRIGKVVLNRS 188

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.260e-42
Identity = 117/190 (61.58%), Postives = 134/190 (70.53%), Query Frame = 0

Query:   12 DGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGG--ATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKV 199
            D DD VCPLCCE +D+SDKNF+PC CGY+VCMWCWH IK +  GLCPACR+ Y+DDPHAF+AVD++EV+K    K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           A  V +R+ L N+RVVQRNLVY  G+   + SEE LRR E FGQ+GKI KV
Sbjct:    3 DSDDDVCPLCCEELDISDKNFMPCRCGYQVCMWCWHHIKNDLNGLCPACRTPYSDDPHAFSAVDRQEVLKQTRQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGQRMVSLSVGEGDSGKLRSHHDNIRAHRVPDRKNLQNIRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKV 192

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A1Z5J8U8_FISSO (CCR4-NOT transcription complex subunit 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8U8_FISSO)

HSP 1 Score: 159 bits (402), Expect = 1.010e-41
Identity = 84/206 (40.78%), Postives = 105/206 (50.97%), Query Frame = 0

Query:   12 DGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVAN-------------RRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            D  D VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E+ +GLCPACR+ Y +DPH F+AVD E+V+K    +                                                            G   SVAN             R +LANMRV++RNLVYA GLPA + SE+VLR+PE FGQYGKI K+ +  +
Sbjct:    2 DDADHVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLKANKARDAALKRQKQQEGGMLSASQHE---------------------------------------GLPNSVANEDVSNVTMEVPKDRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINRA 168

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A7S3L167_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L167_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.410e-41
Identity = 88/193 (45.60%), Postives = 107/193 (55.44%), Query Frame = 0

Query:   12 DGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            D  D VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E  +GLCPACR+ Y +DPH F+AVD EEV+K    K   XXXXXXXX                                                V       +R +LANMRV++RNLVYA GLP  + +EE LR+P+ FGQYGKI K+ +  S
Sbjct:    2 DDADYVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRETESGLCPACRTPYGEDPHQFSAVDVEEVLKANKEKEAAXXXXXXXXQTEDG-------------------------------------------VDAMAVPQDRTQLANMRVIRRNLVYAVGLPPHIATEENLRKPDFFGQYGKISKIVINRS 151

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A1E7EU92_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU92_9STRA)

HSP 1 Score: 147 bits (371), Expect = 6.230e-41
Identity = 73/177 (41.24%), Postives = 91/177 (51.41%), Query Frame = 0

Query:   17 VCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQY 193
            VCPLCCE +D+SD+ F PC CGY+VCMWCWHRI+E+ +GLCPACR+ Y DDPH F+AVD EEV+K    K                                                           VG      +R +LANMRV++RNLVYA GLP  + SE+ LR+ + FGQY
Sbjct:    1 VCPLCCEELDISDRQFFPCKCGYQVCMWCWHRIRESESGLCPACRTPYGDDPHEFSAVDVEEVLKANKEKEAAAKEERNLDSLAGGRQ-----------------------------------------VGQMEVPKDRTQLANMRVIRRNLVYAVGLPPNVASEDALRKSDYFGQY 136

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: A0A6V2MAB7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MAB7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.630e-40
Identity = 82/201 (40.80%), Postives = 107/201 (53.23%), Query Frame = 0

Query:   14 DDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVAN----------RRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            D+ VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E+ +GLCPACR+ Y DDPH F+AVD EEV+K    K                                      XXXXX                  G+++  +          R +LANMRV++RNLVYA GLP  + +E+ LR+ + FGQYGKI K+ +  +
Sbjct:    3 DNDVCPLCCEELDLSDRQFFPCKCGYQVCMWCWHRIRESESGLCPACRTPYGDDPHEFSAVDMEEVLKANKEKAAAEKRERERLRQQQAANALGAGSSSSMGYASGGSMGAXXXXXLGGMHIGGGSDGDLALAMGSSNAGSGRMHLEPPKDRNQLANMRVIRRNLVYAVGLPPSIATEDTLRKSDYFGQYGKISKIVINRN 203

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BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS)

HSP 1 Score: 141 bits (356), Expect = 1.060e-38
Identity = 71/187 (37.97%), Postives = 90/187 (48.13%), Query Frame = 0

Query:   18 CPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVRLGAS 204
            CPLCCE +DLSDK F PC CGY+VCMWCWHRIKE+ +GLCPACR+ Y DDPH F+A+       +                                                                G      +R  LA MRV++RNLVYA G+P  + +EE+LR+PE FGQYGKI K+ +  +
Sbjct:    1 CPLCCEELDLSDKQFYPCKCGYQVCMWCWHRIKESESGLCPACRTPYGDDPHEFSAIGIHHQASD------------------------------------------------------FASLLASNSRGPPEPPKDRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRN 133

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9157.30497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FLE0_ECTSI	1.010e-92	97.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JC61_9PHAE	6.120e-86	95.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YKN6_9STRA	1.620e-46	41.75	RING/Ubox like zinc-binding domain-containing prot...	[more]
A0A7S1C198_9STRA	8.220e-44	51.31	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S2GN38_9STRA	9.260e-42	61.58	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A1Z5J8U8_FISSO	1.010e-41	40.78	CCR4-NOT transcription complex subunit 4 n=2 Tax=F...	[more]
A0A7S3L167_9STRA	3.410e-41	45.60	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A1E7EU92_9STRA	6.230e-41	41.24	RING-type domain-containing protein (Fragment) n=1...	[more]
A0A6V2MAB7_9STRA	1.630e-40	40.80	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
B8BXU6_THAPS	1.060e-38	37.97	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 18..64 e-value: 2.8E-21 score: 75.1
None	No IPR available	PANTHER	PTHR12603:SF0	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4	coord: 10..199
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 13..71
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 168..204 e-value: 2.0E-6 score: 29.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 6..82 e-value: 1.6E-24 score: 86.9
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 10..199
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 18..61 score: 9.819

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9157	contig	Ecto-sp8_S_contig9157:6509..7126 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9157.30497.1	mRNA_Ecto-sp8_S_contig9157.30497.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9157 5710..7126 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9157.30497.1 ID=prot_Ecto-sp8_S_contig9157.30497.1|Name=mRNA_Ecto-sp8_S_contig9157.30497.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=206bp
MPNSNAFNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIK
ENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKKKRAKQRDTDSTGA
AAAAAAAREHQHALHLRHHHQHQQHMQHLHREQVQQQGGGRGGGGVGGAT
SVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKVR
LGASC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR013083	Znf_RING/FYVE/PHD
IPR039780	Mot2
IPR001841	Znf_RING