prot_Ecto-sp8_S_contig915.30478.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig915.30478.1
Unique Nameprot_Ecto-sp8_S_contig915.30478.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length413
Homology
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 517 bits (1331), Expect = 2.080e-182
Identity = 265/282 (93.97%), Postives = 269/282 (95.39%), Query Frame = 0
Query:  126 MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDE 407
            MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLAR           WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGS+EVLAKFGV+PSALPDLFGL+GDVADNIPGVKGIG KGGSRLLEKFETL+GVFAGLDGVGSMGIRGSKGLQ LLSQPGIQEEAMLYREIATLDDE
Sbjct:    1 MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLAR-----------WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLLSQPGIQEEAMLYREIATLDDE 271          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.800e-63
Identity = 111/185 (60.00%), Postives = 133/185 (71.89%), Query Frame = 0
Query:  120 VGARPAMADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRR 304
            V A PA        H  +P+E++++LDGTSMLFRA +G+G+  YLA++GATEV AVLAMGIE AQFI EV+PRY+A+AFDV R +TFRR+L P YKA R P P DL LQ+PLA AL++ LGC      GYEADDVMATLA            WGRS+GL VV+ S DKDM QLVR+RVHVM PRR
Sbjct:   43 VAAAPAAGGITEFKHTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLAT-----------WGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRR 216          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A3N9VXZ7_9DELT (Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A3N9VXZ7_9DELT)

HSP 1 Score: 177 bits (449), Expect = 4.230e-47
Identity = 108/269 (40.15%), Postives = 160/269 (59.48%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVRL 410
            ++LLDG+S ++RA+YG      LA++G     AV          + E  P Y+A+ FD  RE TFRR+LYP+YKA R  +P DL LQ+P  + + +AL     E  G+EADDV+A+LAR+ A           + GL V V + DKD+ Q+V +R+ ++   +D  +  G  EVL +FGV P  +PD+ GL GD ADNIPGV GIG+K  ++L+++F +L+GVF   D V      G K  ++L S    Q++A+L + +AT+  +V L
Sbjct:    7 LFLLDGSSYIYRAYYGVRD---LATSGGMPTNAVFGFTRMLLCLLQEHSPEYLAVVFDRPREETFRRELYPEYKANRDAMPEDLVLQVPYIRKVLQALNIPALEAPGFEADDVIASLARRSA-----------AEGLRVTVVTGDKDLMQIVGERICLLDTMKDCCS--GPLEVLERFGVPPELVPDVLGLAGDTADNIPGVPGIGEKTAAKLVKQFGSLEGVFRWKDLV-----NGKKRRESLQSY---QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A1F9K7W9_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 TaxID=1797892 RepID=A0A1F9K7W9_9DELT)

HSP 1 Score: 169 bits (429), Expect = 5.250e-46
Identity = 101/283 (35.69%), Postives = 162/283 (57.24%), Query Frame = 0
Query:  126 MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEV 408
            M +PPP          +YL+DG+S +FRAF+       L ++      A+L       +F+   KP Y+A+A D G+ET FR ++Y  YK  R   P  L  Q P  + + +A+     E+EG+EADD++ATLA+  +             GL VV+ S DKD+ QLV ++V ++   ++ +  + +  V  KFGV P  + ++ GL+GD  DNIPGVKGIG+K  S L++++E+L+ +FA LD V    ++G++ ++  L+    +EEA+L RE+AT+  +V
Sbjct:    1 MTNPPPC---------VYLVDGSSYIFRAFFALPP---LTNSAGLPTQAILGFTTMTLKFLKTYKPEYLAVALDAGKET-FRNQIYQAYKGNRPEAPPQLIPQFPYIRKVLKAMSVVVLELEGFEADDIIATLAKDFSAR-----------GLSVVIVSGDKDLMQLVGEKVKLLDTAKEKW--IDAAAVKEKFGVAPEKVTEVMGLMGDAIDNIPGVKGIGEKTASALIQRYESLENLFAHLDDVEKSDLKGARRIRNALADR--KEEALLSRELATVRTDV 255          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A7V4PPR6_9DELT (53EXOc domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4PPR6_9DELT)

HSP 1 Score: 168 bits (426), Expect = 7.120e-46
Identity = 110/286 (38.46%), Postives = 164/286 (57.34%), Query Frame = 0
Query:  124 PAMADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQ-ALLSQPGIQEEAMLYREIATLDDEV 408
            PAMA+ P           +YL+DG+S +FRAF+   A   L+S+      A+        + +   +P Y+A+A D GR+T FR ++Y  YK  R   P  L  Q P  + + EAL     E EGYEADD++ATLARQ A          R+V   VV+ S DKD+ QLV D + ++   +D +  +G +EV  KFGV+P  + ++ GL+GD +DNIPGVKGIG+K  S L+++F TL+ +F  LD +   G++G + ++ ALL+    +E A L R +AT+  +V
Sbjct:   10 PAMAESP----------CVYLVDGSSYIFRAFFALPA---LSSSTGLPTNAIYGFTNMMLRLLKTYRPEYLAVALDAGRKT-FRNEIYQDYKGNRPEAPPALIPQFPYIRKVLEALRVAQVEREGYEADDLIATLARQFA---------ARAVQ--VVIVSGDKDLMQLVGDGIRLLDTAKDKW--IGPDEVREKFGVEPDKVIEVIGLMGDASDNIPGVKGIGEKSASGLIQRFRTLEYLFEHLDDLKQTGLKGVERVRKALLTG---RESAFLSRTLATVKSDV 265          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 174 bits (440), Expect = 8.370e-46
Identity = 106/269 (39.41%), Postives = 156/269 (57.99%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVRL 410
            +YLLDG+S ++RAFYG      LA++G     AV          + E  P Y+A+ FD  R+ TFRR++YP+YKA R  +P DL  QIP  + + EAL   T E  G+EADDV+ATLAR+ A             G+ V V + DKD+ Q+V D++ ++   +D  +  G +EVL +FGV P  +PD+ GL GD +DNIPGV GIG+K  ++L+++F +L+GV      V     R  + L A       Q++A+L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEE-----------GIRVTVVTGDKDLMQIVNDKICLLDTMKDSCS--GPQEVLERFGVPPERVPDVLGLSGDTSDNIPGVPGIGEKTAAKLVKQFGSLEGVLRWRSLVNGKKCR--ENLHAY------QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A1G2W2X7_9DELT (Ribonuclease H n=1 Tax=Desulfuromonadaceae bacterium GWC2_58_13 TaxID=1801896 RepID=A0A1G2W2X7_9DELT)

HSP 1 Score: 173 bits (439), Expect = 1.230e-45
Identity = 108/269 (40.15%), Postives = 155/269 (57.62%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVRL 410
            +YLLDG+S ++RA+YG      LA+ G   V AV          + E +P Y+A+ FD  RE TFRRK+YP YKA R  +P DL  QIP  K + +AL     E  G+EADDV+ATLAR+ A           + G+ V V + DKD+ Q+V DR+ ++   +D  +  G  EV  +FGV P  +PD+ GL GD +DNIPGV G+G+K  S L+++F +L+GVF     V      G K  + LL+    +++A L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAYYGFRD---LATAGGMPVNAVFGFTRMLLGLLQETRPDYLAVVFDRPREETFRRKIYPGYKAHRDAMPEDLVPQIPYIKRIVQALNIPALEAPGFEADDVIATLARRYA-----------ADGIEVTVVTGDKDLMQIVGDRIGLLDTMKDKRS--GPREVCDRFGVPPELVPDVLGLAGDASDNIPGVPGLGEKTASELVQRFGSLEGVFEWKSLVS-----GKKRRENLLAH---EDQARLSKILATVRYDVDL 251          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 173 bits (439), Expect = 1.280e-45
Identity = 106/269 (39.41%), Postives = 153/269 (56.88%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVRL 410
            +YLLDG+S ++RA+YG       A++G     AVL       + + E +P Y A+ FD  RE TFRR +YP YKA R+ VP DL LQ+P  + + +AL     E  G+EADDV+ATLAR+ A A           G+ V V + DKD+ Q+V DR+ ++   +   +  G +EVL +FGV P  + D+ GL GD ADNIPGV GIG+K  + L+++F +L+GV   +  V     R S  L A        ++A L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAA-----------GIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGVPGIGEKTAAMLVQRFGSLEGVLQWITLVNGKSRRESLHLHA--------DQARLSKRLATVRYDVPL 251          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: A0A7V4UWE8_9DELT (Ribonuclease H n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A7V4UWE8_9DELT)

HSP 1 Score: 168 bits (426), Expect = 9.580e-44
Identity = 108/269 (40.15%), Postives = 154/269 (57.25%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYREIATLDDEVRL 410
            +YLLDG+S ++RA+YG      +A+ G     AVL         I E +P Y+A+ FD  RE TFRR++YP YKA R  VP +LT QIP  + + +AL     E+ G+EADDV+ATLAR+ A  GA            V V + DKD+ Q+V DR+ ++   ++  +  G EEVL +FGV P  + D+ GL GD  DNIPGV GIG+K  S L++++ +L+GV    D +   G R  + L+A   Q      A L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAYYGIRD---VATAGGMPTNAVLGFTRMLLSLIQENRPDYLAVVFDPPRENTFRREIYPAYKANRDAVPEELTPQIPYIRKVLQALNIPALEVPGFEADDVIATLARRYAGEGA-----------EVTVVTGDKDLLQIVGDRISLLDTMKEKRS--GVEEVLCRFGVPPERVADVLGLAGDSGDNIPGVPGIGEKTASGLVQRYGSLEGVLKWRDQIS--GRRRRENLRAHADQ------ARLSKLLATVRYDVPL 251          
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Match: UPI001E2B40A7 (ribonuclease HI n=1 Tax=Geomonas sp. RF6 TaxID=2897342 RepID=UPI001E2B40A7)

HSP 1 Score: 168 bits (425), Expect = 1.190e-43
Identity = 92/223 (41.26%), Postives = 133/223 (59.64%), Query Frame = 0
Query:  142 IYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKGGSRLLEKFETLQGV 364
            +YLLDG+S ++RA+YG      LA+       A+          I E +P Y+A+AFD  RE TFRR++YPQYKA R   P DL  QIP  + + +AL     E  G+EADDV+ATLAR  A           + G+ V V + DKD+ Q+V D + ++   +D   + G EEV+ +FGV P  + D+ GL GD +DNIPGV GIG+K  ++L+++F +L+G+
Sbjct:    6 LYLLDGSSYIYRAYYGIRE---LATTDGVSTNAIFGFTRMLLGLIQESRPDYLAVAFDPPREETFRREIYPQYKANRDATPEDLIAQIPYIRKMLDALNIPVVEAPGFEADDVIATLARSFA-----------AQGVEVTVVTGDKDLLQIVADGIRLLDTMKD--KLSGREEVVERFGVSPEQVADVLGLAGDASDNIPGVPGIGEKTAAKLVQQFGSLEGI 212          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig915.30478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE2.080e-18293.9753EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA3.800e-6360.005'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A3N9VXZ7_9DELT4.230e-4740.15Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 R... [more]
A0A1F9K7W9_9DELT5.250e-4635.6953EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A7V4PPR6_9DELT7.120e-4638.4653EXOc domain-containing protein (Fragment) n=1 Ta... [more]
A0A533SDF6_9BACT8.370e-4639.41Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]
A0A1G2W2X7_9DELT1.230e-4540.15Ribonuclease H n=1 Tax=Desulfuromonadaceae bacteri... [more]
A0A353MEJ4_9DELT1.280e-4539.41Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A7V4UWE8_9DELT9.580e-4440.15Ribonuclease H n=1 Tax=Geobacteraceae bacterium Ta... [more]
UPI001E2B40A71.190e-4341.26ribonuclease HI n=1 Tax=Geomonas sp. RF6 TaxID=289... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 323..358
e-value: 3.5E-9
score: 46.5
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 142..411
e-value: 9.7E-66
score: 234.4
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 321..410
e-value: 5.9E-16
score: 58.8
NoneNo IPR availableGENE3D1.10.150.20coord: 324..405
e-value: 5.4E-63
score: 214.6
NoneNo IPR availableGENE3D3.40.50.1010coord: 143..410
e-value: 5.4E-63
score: 214.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..412
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.655
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 142..320
e-value: 3.3E-40
score: 137.6
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 140..409
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 320..373
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 141..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig915contigEcto-sp8_S_contig915:13212..18210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig915.30478.1mRNA_Ecto-sp8_S_contig915.30478.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig915 13212..18210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig915.30478.1 ID=prot_Ecto-sp8_S_contig915.30478.1|Name=mRNA_Ecto-sp8_S_contig915.30478.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=413bp
MRRGPRRAVRTPLFALSLALHANLTSSLLHHLLATPVEDAISRNHATATA
AATGTAAGRRRRARPRPVWHFHGSVSPPGRGQPSRSPRCSVTSGPEVAAA
AAADGENGGSDAAAAEDRSVGARPAMADPPPLTHDQLPEESIYLLDGTSM
LFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDV
GRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYE
ADDVMATLARQDAPAGAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVM
QPRRDGYTILGSEEVLAKFGVKPSALPDLFGLVGDVADNIPGVKGIGQKG
GSRLLEKFETLQGVFAGLDGVGSMGIRGSKGLQALLSQPGIQEEAMLYRE
IATLDDEVRLGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008918HhH2
IPR0024215-3_exonuclease_N
IPR020045DNA_polI_H3TH
IPR0200465-3_exonucl_a-hlix_arch_N
IPR038969FEN_bact-like
IPR0362795-3_exonuclease_C_sf
IPR029060PIN-like_dom_sf