prot_Ecto-sp8_S_contig9142.30467.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9142.30467.1
Unique Nameprot_Ecto-sp8_S_contig9142.30467.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9142.30467.1 vs. uniprot
Match: A0A6H5J5A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A0_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 5.480e-47
Identity = 89/135 (65.93%), Postives = 99/135 (73.33%), Query Frame = 0 
Query:    1 MSPVGYAPLRG------LRLGGMFLLMVFFAGSAASAATSGSISEQITNGNAGLRSGRACDPGDTDCLGDERDDSSFLGFAFICCIFWLFVMFRTLRVAAIWVRGTALLVHLWARERGLMVRPGRRFLQGLFIWP 129
            M+PV YAPL G      L LG MF L+V  AGS ASA T+GSIS Q T+GNAGLRSG+ACDPGD DCLGDERDDSSFLGFA IC +  LFV+FRTLRVAA+WVRGTA+LV L           GR+F QGL IWP
Sbjct:    1 MNPVRYAPLCGVLCHGSLPLGAMFSLVVVLAGSVASADTTGSISAQTTSGNAGLRSGKACDPGDADCLGDERDDSSFLGFACICYMVSLFVVFRTLRVAAMWVRGTAILVRLXXXXXXXXXXXGRQF-QGLIIWP 134
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9142.30467.1 vs. uniprot
Match: A0A6H5JI28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI28_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 9.110e-44
Identity = 80/110 (72.73%), Postives = 88/110 (80.00%), Query Frame = 0 
Query:    1 MSPVGYAPLRGLRLGGMFLLMVFFAGSAASAATSGSISEQITNGNAGLRSGRACDPGDTDCLGDERDDSSFLGFAFICCIFWLFVMFRTLRVAAIWVRGTALLVHLWARE 110
            M+PVGYAPLRGL LG MF L+V  AGS ASAAT GSIS + T+GNAGLRSG+ACDPGD DC GDERDDSSFLGFA ICC+F LFV+FRTLRVA +W R   LL    ARE
Sbjct:    1 MNPVGYAPLRGLPLGAMFSLVVVLAGSVASAATVGSISARTTSGNAGLRSGKACDPGDADCFGDERDDSSFLGFACICCMFLLFVVFRTLRVATMWARVPELLYK--ARE 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9142.30467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5A0_9PHAE5.480e-4765.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI28_9PHAE9.110e-4472.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.689
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 70..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9142contigEcto-sp8_S_contig9142:998..2864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9142.30467.1mRNA_Ecto-sp8_S_contig9142.30467.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9142 998..2864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9142.30467.1 ID=prot_Ecto-sp8_S_contig9142.30467.1|Name=mRNA_Ecto-sp8_S_contig9142.30467.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=130bp
MSPVGYAPLRGLRLGGMFLLMVFFAGSAASAATSGSISEQITNGNAGLRS
GRACDPGDTDCLGDERDDSSFLGFAFICCIFWLFVMFRTLRVAAIWVRGT
ALLVHLWARERGLMVRPGRRFLQGLFIWP*
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