prot_Ecto-sp8_S_contig91408.30465.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig91408.30465.1
Unique Nameprot_Ecto-sp8_S_contig91408.30465.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length45
Homology
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.200e-22
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVR 44
            DTRAPDNDLVLEWVHGYRGHDCR AAMYTASGEVLFFAGSLVVR
Sbjct:  788 DTRAPDNDLVLEWVHGYRGHDCRKAAMYTASGEVLFFAGSLVVR 831          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A315VXY2_GAMAF (HELP domain-containing protein n=1 Tax=Gambusia affinis TaxID=33528 RepID=A0A315VXY2_GAMAF)

HSP 1 Score: 56.6 bits (135), Expect = 1.420e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP   L LEWVHGYRGH CRN   YTA  E+++F   + V Y
Sbjct:    3 DKTAPRCQLRLEWVHGYRGHQCRNNLFYTAGKELVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A8J1UHX9_OWEFU (Ofus.G151089 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UHX9_OWEFU)

HSP 1 Score: 58.2 bits (139), Expect = 1.790e-9
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP + L LEWV+GYRGH CRN   YTAS E+++F   + V Y
Sbjct:    3 DKTAPKSQLRLEWVYGYRGHQCRNNLYYTASKEIVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A1A6HIL1_NEOLE (HELP domain-containing protein n=4 Tax=Amniota TaxID=32524 RepID=A0A1A6HIL1_NEOLE)

HSP 1 Score: 55.8 bits (133), Expect = 3.150e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP   L LEWV+GYRGH CRN   YTA  EV++F   + V Y
Sbjct:    3 DRTAPSCQLRLEWVYGYRGHQCRNNLYYTAGKEVVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A485MGJ2_LYNPA (HELP domain-containing protein n=1 Tax=Lynx pardinus TaxID=191816 RepID=A0A485MGJ2_LYNPA)

HSP 1 Score: 55.8 bits (133), Expect = 3.640e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP   L LEWV+GYRGH CRN   YTA  EV++F   + V Y
Sbjct:    3 DRTAPSCQLRLEWVYGYRGHQCRNNLYYTAGKEVVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A061INL2_CRIGR (Echinoderm microtubule-associated protein-like 6 isoform 1 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061INL2_CRIGR)

HSP 1 Score: 55.8 bits (133), Expect = 3.640e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP   L LEWV+GYRGH CRN   YTA  EV++F   + V Y
Sbjct:    3 DRTAPSCQLRLEWVYGYRGHQCRNNLYYTAGKEVVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A4Z2GUL4_9TELE (Echinoderm microtubule-associated protein-like 6 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2GUL4_9TELE)

HSP 1 Score: 55.8 bits (133), Expect = 4.840e-9
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP+  L LEWV+GYRGH CRN   YTA+ E+++F   + V Y
Sbjct:    3 DRTAPNCHLRLEWVYGYRGHQCRNNLYYTAAKEIVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A061IQ63_CRIGR (Echinoderm microtubule-associated protein-like 6 isoform 2 n=2 Tax=Rodentia TaxID=9989 RepID=A0A061IQ63_CRIGR)

HSP 1 Score: 55.8 bits (133), Expect = 5.570e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            D  AP   L LEWV+GYRGH CRN   YTA  EV++F   + V Y
Sbjct:    3 DRTAPSCQLRLEWVYGYRGHQCRNNLYYTAGKEVVYFVAGVGVVY 47          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: A0A7S3JT88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT88_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 6.050e-9
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            +T  PD +L LEWVHGYRG DCR+   Y  SGE+++ A  L + Y
Sbjct:   49 ETALPDANLSLEWVHGYRGEDCRSNIGYAPSGEIIYPAARLAIIY 93          
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Match: UPI000D6A27A7 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000D6A27A7)

HSP 1 Score: 58.9 bits (141), Expect = 6.090e-9
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    3 RAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY 45
            RAPD+ L L+++HGYRG+DCRN   YT SGEV++   ++ V Y
Sbjct:  118 RAPDDSLKLQFIHGYRGYDCRNNLFYTQSGEVVYHIAAVAVVY 160          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig91408.30465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE32_ECTSI3.200e-2297.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A315VXY2_GAMAF1.420e-953.33HELP domain-containing protein n=1 Tax=Gambusia af... [more]
A0A8J1UHX9_OWEFU1.790e-953.33Ofus.G151089 protein (Fragment) n=1 Tax=Owenia fus... [more]
A0A1A6HIL1_NEOLE3.150e-953.33HELP domain-containing protein n=4 Tax=Amniota Tax... [more]
A0A485MGJ2_LYNPA3.640e-953.33HELP domain-containing protein n=1 Tax=Lynx pardin... [more]
A0A061INL2_CRIGR3.640e-953.33Echinoderm microtubule-associated protein-like 6 i... [more]
A0A4Z2GUL4_9TELE4.840e-951.11Echinoderm microtubule-associated protein-like 6 n... [more]
A0A061IQ63_CRIGR5.570e-953.33Echinoderm microtubule-associated protein-like 6 i... [more]
A0A7S3JT88_9STRA6.050e-951.11Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
UPI000D6A27A76.090e-953.49echinoderm microtubule-associated protein-like 6 n... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..16
e-value: 4.0E-13
score: 50.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 17..45
e-value: 4.0E-13
score: 50.7
IPR005108HELPPFAMPF03451HELPcoord: 2..45
e-value: 1.4E-15
score: 56.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig91408contigEcto-sp8_S_contig91408:36..170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig91408.30465.1mRNA_Ecto-sp8_S_contig91408.30465.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig91408 36..170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig91408.30465.1 ID=prot_Ecto-sp8_S_contig91408.30465.1|Name=mRNA_Ecto-sp8_S_contig91408.30465.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=45bp
DTRAPDNDLVLEWVHGYRGHDCRNAAMYTASGEVLFFAGSLVVRY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR005108HELP