prot_Ecto-sp8_S_contig91338.30454.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig91338.30454.1
Unique Name	prot_Ecto-sp8_S_contig91338.30454.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	122

Homology

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: D7FJ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ11_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 1.280e-68
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0

Query:   11 YLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            YLRLGIMARDSGQIHEASKWFKQALEVDGENP+IVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFS
Sbjct:  737 YLRLGIMARDSGQIHEASKWFKQALEVDGENPNIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFS 848

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: A0A835YZR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.230e-34
Identity = 61/86 (70.93%), Postives = 72/86 (83.72%), Query Frame = 0

Query:   37 VDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            +D +NPD++AYIGNL MR+ EWGPAQK FE+IL MP LRGD YA LSLGNIYFSNL+DR KYEKHL HAANFY +VL  D +NA++
Sbjct:    1 MDKDNPDVLAYIGNLRMRSGEWGPAQKNFERILSMPELRGDGYAMLSLGNIYFSNLDDRGKYEKHLTHAANFYMQVLTNDFSNAYA 86

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: A0A4U1EGP8_MONMO (Uncharacterized protein (Fragment) n=1 Tax=Monodon monoceros TaxID=40151 RepID=A0A4U1EGP8_MONMO)

HSP 1 Score: 125 bits (314), Expect = 5.890e-31
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLE----DRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L  KT + +GYLRLG MARD G  +EAS WFK+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ P  + D+Y+ L+LGN++   L     DR K ++H   A   Y +VL+ D  N ++
Sbjct:  562 LNMKTCIFSGYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYA 687

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: V4ARM6_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ARM6_LOTGI)

HSP 1 Score: 124 bits (312), Expect = 1.090e-30
Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNL----EDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD GQI+EAS WFK+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ PG + D+Y+ ++LGN++   L    +D+ K ++H   A   Y +VL+ DD N ++
Sbjct:  524 LRDHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKHEWGPGQKKFERILQRPGTKDDAYSLIALGNVWLQTLHQPMKDKAKEKRHQDRALAMYKQVLRNDDRNIWA 649

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: A0A2H6NHN8_MICLE (Uncharacterized protein (Fragment) n=1 Tax=Micrurus lemniscatus carvalhoi TaxID=129465 RepID=A0A2H6NHN8_MICLE)

HSP 1 Score: 119 bits (298), Expect = 1.290e-30
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLE----DRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD G  +EAS WFK+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ P  + D+Y+ L+LGN++   L     DR K ++H   A   Y +VL+ D  N ++
Sbjct:   52 LREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYA 177

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: A0A7R9X798_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9X798_9CRUS)

HSP 1 Score: 124 bits (311), Expect = 1.500e-30
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLE----DRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD GQI+EAS WFK+AL+++ E+PD  + IGNLH+   EWGP QKKFE+IL  P    D+Y+ ++LGN++   L     DR K ++H   A N Y +VLK D  N ++
Sbjct:  524 LREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINNEHPDAWSLIGNLHLAKMEWGPGQKKFERILNNPASASDAYSLIALGNVWLQTLHQPSRDRDKEKRHQERALNLYKQVLKNDPRNIWA 649

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: UPI0014557E51 (RNA polymerase-associated protein CTR9 homolog n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014557E51)

HSP 1 Score: 123 bits (309), Expect = 2.790e-30
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNL----EDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD GQI+EAS WFK+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ P    DSY+ LSLGN++   L     D+ K ++H   A   Y +VL+ D  N F+
Sbjct:  527 LREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATANDSYSLLSLGNVWLQTLYQPTRDKEKEKRHQDRALAMYKQVLRNDGRNLFA 652

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: A0A7R9HNK6_9NEOP (Hypothetical protein n=1 Tax=Timema monikensis TaxID=170555 RepID=A0A7R9HNK6_9NEOP)

HSP 1 Score: 115 bits (288), Expect = 3.760e-30
Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 0

Query:    7 LLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLE----DRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            +  GYLRLG MARD GQI++AS WFK+AL  + E+PD  + +GNLH+   EWGP QKKFE++L+ P    D+Y+ ++LGN++   L     D+ + ++H   A   Y +VL+ D  N ++
Sbjct:    1 MFVGYLRLGCMARDKGQIYDASDWFKEALRFNNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPVTSNDAYSLIALGNVWLQTLHQPTRDKEREKRHQERALAMYKQVLRNDPRNIWA 120

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: UPI0018D91221 (RNA polymerase-associated protein CTR9 homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D91221)

HSP 1 Score: 123 bits (308), Expect = 3.810e-30
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNL----EDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD GQI+EAS WFK+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ P  + DSY+ LSLGN++   L     D+ K ++H   A   Y +VL+ D  N ++
Sbjct:  528 LREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQNDSYSLLSLGNVWLQTLYQPTRDKEKEKRHQDRALAMYKQVLRNDGRNLYA 653

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BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Match: UPI00106ACE17 (RNA polymerase-associated protein CTR9 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106ACE17)

HSP 1 Score: 122 bits (305), Expect = 9.620e-30
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 0

Query:    1 LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNL----EDRTKYEKHLLHAANFYHEVLKKDDANAFS 122
            L    N +  YLRLG MARD GQI+EAS W+K+AL+++ ++PD  + IGNLH+   EWGP QKKFE+IL+ P    DSY+ L+LGN++   L    +D++K ++H   A   Y +VL++D  N ++
Sbjct:  523 LREHPNYVDCYLRLGCMARDRGQIYEASDWYKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTANDSYSLLALGNVWLQTLHQPTKDKSKEKRHQDRALALYKQVLRQDSRNLYA 648

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig91338.30454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJ11_ECTSI	1.280e-68	99.11	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YZR8_9STRA	2.230e-34	70.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4U1EGP8_MONMO	5.890e-31	46.03	Uncharacterized protein (Fragment) n=1 Tax=Monodon...	[more]
V4ARM6_LOTGI	1.090e-30	46.03	Uncharacterized protein n=1 Tax=Lottia gigantea Ta...	[more]
A0A2H6NHN8_MICLE	1.290e-30	44.44	Uncharacterized protein (Fragment) n=1 Tax=Micruru...	[more]
A0A7R9X798_9CRUS	1.500e-30	47.62	Hypothetical protein (Fragment) n=1 Tax=Argulus fo...	[more]
UPI0014557E51	2.790e-30	47.62	RNA polymerase-associated protein CTR9 homolog n=1...	[more]
A0A7R9HNK6_9NEOP	3.760e-30	43.33	Hypothetical protein n=1 Tax=Timema monikensis Tax...	[more]
UPI0018D91221	3.810e-30	46.83	RNA polymerase-associated protein CTR9 homolog n=1...	[more]
UPI00106ACE17	9.620e-30	45.24	RNA polymerase-associated protein CTR9 homolog n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 8..122 e-value: 2.0E-13 score: 52.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 8..74
IPR031101	RNA polymerase-associated protein Ctr9	PANTHER	PTHR14027	TPR REPEAT NUCLEAR PHOSPHOPROTEIN/CTR9	coord: 10..121
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 8..75 score: 12.629
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 8..41 score: 8.909
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 42..75 score: 5.812

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig91338	contig	Ecto-sp8_S_contig91338:57..589 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig91338.30454.1	mRNA_Ecto-sp8_S_contig91338.30454.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig91338 57..589 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig91338.30454.1 ID=prot_Ecto-sp8_S_contig91338.30454.1|Name=mRNA_Ecto-sp8_S_contig91338.30454.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=122bp
LTSKTNLLAGYLRLGIMARDSGQIHEASKWFKQALEVDGENPDIVAYIGN
LHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEK
HLLHAANFYHEVLKKDDANAFS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR031101	Ctr9
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat