prot_Ecto-sp8_S_contig11279.1642.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11279.1642.1
Unique Nameprot_Ecto-sp8_S_contig11279.1642.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length298
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11279.1642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 225..256
e-value: 2800.0
score: 1.6
coord: 260..289
e-value: 0.012
score: 24.8
coord: 149..179
e-value: 62.0
score: 12.5
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 261..287
e-value: 2.2E-5
score: 24.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 260..292
score: 11.861
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 21..298
e-value: 1.6E-18
score: 68.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 67..297
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..298
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 260..298
score: 14.822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11279contigEcto-sp8_S_contig11279:183..1076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11279.1642.1mRNA_Ecto-sp8_S_contig11279.1642.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11279 183..1076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11279.1642.1 ID=prot_Ecto-sp8_S_contig11279.1642.1|Name=mRNA_Ecto-sp8_S_contig11279.1642.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=298bp
IDRKIQILRPPHSLTSLQFLSLLSNSYSSTLSTDMNSSSAATKQAWKAAL
EKAIVKHGGPQVMDKLMDRCVDQGCVDGMQALVDRGCKVYKDHLYAAATP
GHLGAVEFICNFFKDMPKSEQKAHHERHVDDDEDDYNSAGTCLFEWIVDG
TSAFDSAIEMGHFEVVKYIIKCYGGGLPVADMNVWAYQTAFEHKHYEMGI
YLCDFEQKHVDEDLDEDDEEDSCYEGFWPFYYIVETEFDPALFQILIDRK
LLGVDDVSTLGNTMLHLACRLNNKKMLDLFLEAGADVCTKNSDGKSPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom