prot_Ecto-sp8_S_contig11028.1402.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11028.1402.1
Unique Nameprot_Ecto-sp8_S_contig11028.1402.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length433
Homology
BLAST of mRNA_Ecto-sp8_S_contig11028.1402.1 vs. uniprot
Match: A0A2Z3GZA6_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3GZA6_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 6.010e-7
Identity = 60/196 (30.61%), Postives = 76/196 (38.78%), Query Frame = 0
Query:   50 PVVLCAAHGGNAVDGDQSETLLQRPVVNPLPRGSVDVPGKARLAGVNLVADVGTSQLLEEIDRRLTHKCSSCGNGGFATAVRSPAAVVARFHRKYVDANRPLED--EDAMAVHPSCTRARGVHQSYHRAIETAIGALESRCCWTQAARPSGRNREERDEEERGKETPRVLLLDVHGQCKSVDNVLIGTCNGKTADL 243
            PV+L A HGG              P V+P     + V G    AG     D GT +L       +  K             + P  VVA+FHRK++DANRP E   EDA A  P+    RG   SY R ++   G                                R LLLD+HGQ +  D V+ GT +GKT  L
Sbjct:   51 PVILSAPHGGTK----------DVPGVSPRKGDGLPVGGSGFFAG----RDGGTEELAHATAAAIAKKTG-----------KKPYLVVAQFHRKFIDANRPPEIAYEDAKAK-PTYDAYRGTLASYCREVKKRYG--------------------------------RGLLLDIHGQGRMKDTVIRGTKDGKTVAL 188          
BLAST of mRNA_Ecto-sp8_S_contig11028.1402.1 vs. uniprot
Match: UPI001A000F6D (Uncharacterized protein n=2 Tax=Alienimonas chondri TaxID=2681879 RepID=UPI001A000F6D)

HSP 1 Score: 62.8 bits (151), Expect = 6.310e-7
Identity = 67/224 (29.91%), Postives = 88/224 (39.29%), Query Frame = 0
Query:   49 LPVVLCAAHGGNAVDGDQSETLLQRPVVNPLPRGSVDVPGKARLAGVNLVADVGTSQLLEEIDRRLTHKCSSCGNGGFATAVRSPAAVVARFHRKYVDANRPLEDEDAMAVHPSCTRARGVHQSYHRAIETAIGALESRCCWTQAARPSGRNREERDEEERGKETPRVLLLDVHGQCKSVDNVLIGTCNGKTADL-----EELNTPHKGFLWHLRRAFNPKEGG 267
            LP++L A HGG A                 L  G  +  G+A   GV    D G  + +   D R+        +G      + P+ VVARF RKY+DANRP     A   HP    A   +  YH+ ++  I             R  GR                 LLLD+HGQ    D+V  GT +G TA       EE+ +P K  + HLR A   K  G
Sbjct:  278 LPIILSAPHGGRA-----------------LVPGVPERTGEAFQPGVG--EDTGKYKFVTSRDTRVDQLALLVADGLEQRTGKRPSLVVARFSRKYIDANRP---RGAGVEHPLALPA---YDLYHQKLDDLI------------RRQQGRG----------------LLLDIHGQSAEKDSVFRGTRSGVTAGAPYQAGEEVESPGKRPI-HLRLADAMKSNG 447          
BLAST of mRNA_Ecto-sp8_S_contig11028.1402.1 vs. uniprot
Match: A0A5C6EKP9_9BACT (N-formylglutamate amidohydrolase n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EKP9_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.400e-5
Identity = 61/216 (28.24%), Postives = 84/216 (38.89%), Query Frame = 0
Query:   27 GSLHWDDHGVTSLVQSRTVSATLPVVLCAAHGGNAVDGDQSETLLQRPVVNPLPRGSVDVPGKARLAGVNLVADVGTSQLLEEIDRRLTHKCSSCGNGGFATAVRSPAAVVARFHRKYVDANR--PLEDEDAMAVHPSCTRARGVHQSYHRAIETAIGALESRCCWTQAARPSGRNREERDEEERGKETPRVLLLDVHGQCKSVDNVLIGTCNGKT 240
            GSL ++      L+Q  T    LP++L A HGG            ++P+    PR  V V         N + D+ T +L E +   +                + P  V+ARF+RKY DANR  PL  E           A+ V+Q+YH AI  A   +  R  W                        R +LLD+HGQ      +  GT NGKT
Sbjct:   27 GSLRFE-----KLIQQET--GELPIILSAPHGG------------RQPIPGVHPRQGVGVKA------FNSIPDLATDRLTETLADAIEKAMG-----------KRPYVVIARFNRKYADANRREPLAYESE--------NAKQVYQAYHAAIAEAKADVIER--WG-----------------------RGVLLDIHGQSTEPSAIFRGTANGKT 173          
BLAST of mRNA_Ecto-sp8_S_contig11028.1402.1 vs. uniprot
Match: A0A4P5YSZ9_9BACT (BPL_N domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YSZ9_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 3.320e-5
Identity = 58/201 (28.86%), Postives = 84/201 (41.79%), Query Frame = 0
Query:   42 SRTVSAT-LPVVLCAAHGGNAVDGDQSETLLQRPVVNPLPRGSVDVPGKARL-AGVNLVADVGTSQLLEEIDRRLTHKCSSCGNGGFATAVRSPAAVVARFHRKYVDANRPLEDEDAMAVHPSCTRARGVHQSYHRAIETAIGALESRCCWTQAARPSGRNREERDEEERGKETPRVLLLDVHGQCKSVDNVLIGTCNGKT 240
            + TV+A  LP++L A HGG A     +E            +G+    G AR  A ++   D+ T +L + +++RL  +               P  V+ARFHRKY+DANR  ED            A   +++YH AI  A   + +R  W                        R ++LD+HGQ      V  GT NGKT
Sbjct:   52 AMTVAAGGLPIILTAPHGGRAALPGVAER-----------QGA----GAARFNAKIDTNTDLLTEKLADALEQRLGKR---------------PYVVIARFHRKYLDANRRPEDAFESPA------ATATYEAYHAAIAAACQEVTAR--WG-----------------------RGVVLDIHGQASQPGVVFRGTQNGKT 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11028.1402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2Z3GZA6_9BACT6.010e-730.61Uncharacterized protein n=1 Tax=Gemmata obscuriglo... [more]
UPI001A000F6D6.310e-729.91Uncharacterized protein n=2 Tax=Alienimonas chondr... [more]
A0A5C6EKP9_9BACT1.400e-528.24N-formylglutamate amidohydrolase n=1 Tax=Rubripire... [more]
A0A4P5YSZ9_9BACT3.320e-528.86BPL_N domain-containing protein n=1 Tax=Verrucomic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11028contigEcto-sp8_S_contig11028:1803..3469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11028.1402.1mRNA_Ecto-sp8_S_contig11028.1402.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11028 1803..3469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11028.1402.1 ID=prot_Ecto-sp8_S_contig11028.1402.1|Name=mRNA_Ecto-sp8_S_contig11028.1402.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=433bp
ARCELKQCDAHLLKPSTNTCRAAFYMGSLHWDDHGVTSLVQSRTVSATLP
VVLCAAHGGNAVDGDQSETLLQRPVVNPLPRGSVDVPGKARLAGVNLVAD
VGTSQLLEEIDRRLTHKCSSCGNGGFATAVRSPAAVVARFHRKYVDANRP
LEDEDAMAVHPSCTRARGVHQSYHRAIETAIGALESRCCWTQAARPSGRN
REERDEEERGKETPRVLLLDVHGQCKSVDNVLIGTCNGKTADLEELNTPH
KGFLWHLRRAFNPKEGGRDGDVGTAAATAVRYRGEREGGAGGRGEGEREE
DRQGREKEAANEEATTKHVGNGTKNEAVVVVLPIHGEKEVAGYTGGYTVQ
RHARSRAGEGAVVQGRPPQAAVEKGEEESRRGSNRGSLAVDAVQLEFGTS
FRRTPEARANAAEAVACAIFNHLQQGQTNWTS*
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