prot_Ecto-sp8_S_contig10970.1340.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10970.1340.1
Unique Nameprot_Ecto-sp8_S_contig10970.1340.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length177
Homology
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: D7G7A4_ECTSI (Similar to chromodomain helicase DNA binding protein 4 isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A4_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.530e-95
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0
Query:    2 NDQQENSGSTGGGDKDIFLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNEKQTRAEKWGDGSHRGRKVSQWTDEAVDQLL 177
            NDQQE SGSTGG DKDIFLFFLSTKAGGQGINLATADTV+IYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNEKQTRAEKWGDGSHRGRKVSQWTDEAVDQLL
Sbjct: 1168 NDQQEKSGSTGGSDKDIFLFFLSTKAGGQGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQEQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNEKQTRAEKWGDGSHRGRKVSQWTDEAVDQLL 1343          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A6H5JZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW8_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.060e-65
Identity = 151/213 (70.89%), Postives = 153/213 (71.83%), Query Frame = 0
Query:    3 DQQENSGSTGGGDKDIFLFFLSTKAGGQ---------------------GINLATADTVVIYDSDWNPHNDLQALARAHRIGQANK-------------VMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ----EQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNEKQTRAEKWGDGSHRGRKVSQWTDEAVDQLL 177
            DQQE SGSTGGGDKDIFLFFLSTKAGGQ                     GINLATADTV+IYDSDWNPHNDLQALARAHRIGQANK             VMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ    EQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDN+K   A                  EAVDQLL
Sbjct: 1048 DQQEKSGSTGGGDKDIFLFFLSTKAGGQARKGAPQLATSEPHTSVVIDVGINLATADTVIIYDSDWNPHNDLQALARAHRIGQANKARFLVRRLTCLNEVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQAQFLEQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNDKVQAAH-----------------EAVDQLL 1243          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A7S2SHU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHU1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 8.560e-50
Identity = 106/201 (52.74%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    7 NSGSTGGGDKDIFLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNK--SMTQEQLNLVIKYGAEDLF------------------REEPDDEAEGXXXXXXXXXXXXDNEK---------QTRAEKWGDGSHRGRKVSQ-WTDEAVDQLL 177
            N  ST G D+  F+F LST+AGGQGINLATADTVVIYD+DWNPHNDLQALARAHRIGQ ++VMIYRFV+RATVEERIL++AKKKL+LEHVVV    +  S +Q +LN V+KYGAE+LF                   EE D  ++G                         + RA+KWGDG+ +  K S  W DEAVD+L+
Sbjct:  164 NRASTSGNDQQ-FIFLLSTRAGGQGINLATADTVVIYDADWNPHNDLQALARAHRIGQKHQVMIYRFVTRATVEERILQIAKKKLMLEHVVVHGAGRGASFSQNELNSVLKYGAEELFADDXXXXXXXXXXXXXXXEEEGDAGSDGSSEKPKRGPGRPRKGATPPPSVDIGEVRAKKWGDGNAKQTKRSIIWDDEAVDKLV 363          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A4D9DCH2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCH2_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.030e-45
Identity = 93/168 (55.36%), Postives = 120/168 (71.43%), Query Frame = 0
Query:   16 KDIFLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNK--SMTQEQLNLVIKYGAEDLFREEPDDEAEGXXXXXXXXXXXXDNEKQTR---AEKWGDG-SHRGRKVSQWTDEAVDQLL 177
            +D F+F LST+AGG GINL +ADTV+IYD DWNPHNDLQALARAHRIGQ  KVM+YR ++R +VEER L++AKKKLLLEHVVV +  +  +MTQE+L+ V+KYG E+LF EE  ++A                E++T    A+KWGDG + +  K   W +EAVD+LL
Sbjct:  866 EDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARN-------------GEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLL 1020          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A7K8ZL85_9PASS (CHD3 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K8ZL85_9PASS)

HSP 1 Score: 149 bits (377), Expect = 3.220e-43
Identity = 73/111 (65.77%), Postives = 96/111 (86.49%), Query Frame = 0
Query:   19 FLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREE 125
            F F LST+AGG GINLATADTVVI+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G      SM++++L+ ++K+G E+LF++E
Sbjct:   33 FCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE 143          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A6J1W692_9SAUR (chromodomain-helicase-DNA-binding protein 3-like n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1W692_9SAUR)

HSP 1 Score: 150 bits (380), Expect = 1.490e-42
Identity = 73/115 (63.48%), Postives = 99/115 (86.09%), Query Frame = 0
Query:   19 FLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREEPDDE 129
            F F LST+AGG GINLATADTV+I+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G    + SM++++L+ ++K+G E+LF++E + E
Sbjct:   46 FCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKDENEGE 160          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A7L0EC71_TROML (CHD5 protein (Fragment) n=15 Tax=Aves TaxID=8782 RepID=A0A7L0EC71_TROML)

HSP 1 Score: 148 bits (373), Expect = 1.880e-42
Identity = 72/115 (62.61%), Postives = 97/115 (84.35%), Query Frame = 0
Query:   19 FLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREEPDDE 129
            F F LST+AGG GINLATADTV+IYDSDWNPHND+QA +RAHRIGQ  KVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G    + SMT+++L+ ++K+G E+LF+++ + E
Sbjct:   31 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGE 145          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: UPI001CB7AFF9 (chromodomain-helicase-DNA-binding protein 4-like n=1 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7AFF9)

HSP 1 Score: 148 bits (374), Expect = 2.650e-42
Identity = 72/111 (64.86%), Postives = 95/111 (85.59%), Query Frame = 0
Query:   19 FLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREE 125
            F F LST+AGG GINLATADTV+IYDSDWNPHND+QA +RAHRIGQ  KVMIYRFV+RA+VEERI +VAKKK++L H+VV+ G    + SM++++L+ ++K+G E+LF++E
Sbjct:   46 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKDE 156          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: A0A183WUH2_TRIRE (Helicase C-terminal domain-containing protein n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183WUH2_TRIRE)

HSP 1 Score: 150 bits (378), Expect = 5.480e-42
Identity = 72/115 (62.61%), Postives = 95/115 (82.61%), Query Frame = 0
Query:   15 DKDIFLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG-----NKSMTQEQLNLVIKYGAEDLFRE 124
            D   F F LST+AGG GINLA+ADTV+IYDSDWNPHND+QA +RAHRIGQ+NKVMIYRFV+R TVEER+ +VAKKK++L H+VV+ G     +  M++++L+ ++K+G EDLF+E
Sbjct:  105 DSPSFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRGTVEERVTQVAKKKMMLTHLVVRPGLGGKGSCQMSKKELDDILKFGTEDLFKE 219          
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Match: UPI000CDA7F73 (chromodomain-helicase-DNA-binding protein 3-like n=1 Tax=Cyanistes caeruleus TaxID=156563 RepID=UPI000CDA7F73)

HSP 1 Score: 149 bits (377), Expect = 6.060e-42
Identity = 73/111 (65.77%), Postives = 96/111 (86.49%), Query Frame = 0
Query:   19 FLFFLSTKAGGQGINLATADTVVIYDSDWNPHNDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQDG----NKSMTQEQLNLVIKYGAEDLFREE 125
            F F LST+AGG GINLATADTVVI+DSDWNPHND+QA +RAHRIGQANKVMIYRFV+RA+VEERI +VAK+K++L H+VV+ G      SM++++L+ ++K+G E+LF++E
Sbjct:   34 FCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10970.1340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7A4_ECTSI1.530e-9598.30Similar to chromodomain helicase DNA binding prote... [more]
A0A6H5JZW8_9PHAE2.060e-6570.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SHU1_9STRA8.560e-5052.74Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9DCH2_9STRA3.030e-4555.36Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7K8ZL85_9PASS3.220e-4365.77CHD3 protein (Fragment) n=3 Tax=Passeriformes TaxI... [more]
A0A6J1W692_9SAUR1.490e-4263.48chromodomain-helicase-DNA-binding protein 3-like n... [more]
A0A7L0EC71_TROML1.880e-4262.61CHD5 protein (Fragment) n=15 Tax=Aves TaxID=8782 R... [more]
UPI001CB7AFF92.650e-4264.86chromodomain-helicase-DNA-binding protein 4-like n... [more]
A0A183WUH2_TRIRE5.480e-4262.61Helicase C-terminal domain-containing protein n=1 ... [more]
UPI000CDA7F736.060e-4265.77chromodomain-helicase-DNA-binding protein 3-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 21..63
e-value: 1.5E-8
score: 34.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..104
score: 12.132
NoneNo IPR availableGENE3D3.40.50.300coord: 3..155
e-value: 6.7E-48
score: 165.3
NoneNo IPR availablePANTHERPTHR45623:SF17CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATEDcoord: 15..162
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 15..162
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10970contigEcto-sp8_S_contig10970:4068..6645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10970.1340.1mRNA_Ecto-sp8_S_contig10970.1340.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10970 4068..6647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10970.1340.1 ID=prot_Ecto-sp8_S_contig10970.1340.1|Name=mRNA_Ecto-sp8_S_contig10970.1340.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=177bp
RNDQQENSGSTGGGDKDIFLFFLSTKAGGQGINLATADTVVIYDSDWNPH
NDLQALARAHRIGQANKVMIYRFVSRATVEERILEVAKKKLLLEHVVVQD
GNKSMTQEQLNLVIKYGAEDLFREEPDDEAEGGDTAAAAPAGGGDNEKQT
RAEKWGDGSHRGRKVSQWTDEAVDQLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase