prot_Ecto-sp8_S_contig10962.1332.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10962.1332.1
Unique Nameprot_Ecto-sp8_S_contig10962.1332.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length168
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10962.1332.1 vs. uniprot
Match: A0A6H5JKZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 6.550e-45
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0 
Query:   91 MHLFSRLVCCGPGAESNVHYSDEDSSGDEFTGSGAASAAVIRWPHDTPRRLEDAGSVRVLPSDVKAPAERSRHPGHRK 168
            MHLFSRLVCCGPGAESNVHYSDE+SSGDEFTGSGAASA VIRWPHDTPRRLEDAGSVRVLPSDVKAP ERSRHPGHRK
Sbjct:    1 MHLFSRLVCCGPGAESNVHYSDEESSGDEFTGSGAASATVIRWPHDTPRRLEDAGSVRVLPSDVKAPTERSRHPGHRK 78
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BLAST of mRNA_Ecto-sp8_S_contig10962.1332.1 vs. uniprot
Match: D8LK63_ECTSI (Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK63_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 6.470e-43
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:   91 MHLFSRLVCCGPGAESNVHYSDEDSSGDEFTGSGAASAAVIRWPHDTPRRLEDAGSVRVLPSDVKAPAERSRHPGHRK 168
            MHLFSRLVCCGPGAESNVHYSDEDSSGDEFTGSGAASAAVIRWPHDTPRRLEDAGSVRVLPSDVKA AERSRHPGHRK
Sbjct:    1 MHLFSRLVCCGPGAESNVHYSDEDSSGDEFTGSGAASAAVIRWPHDTPRRLEDAGSVRVLPSDVKATAERSRHPGHRK 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10962.1332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKZ5_9PHAE6.550e-4596.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK63_ECTSI6.470e-4398.72Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10962contigEcto-sp8_S_contig10962:3518..4021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10962.1332.1mRNA_Ecto-sp8_S_contig10962.1332.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10962 3518..4022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10962.1332.1 ID=prot_Ecto-sp8_S_contig10962.1332.1|Name=mRNA_Ecto-sp8_S_contig10962.1332.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=168bp
YIVHISLCPAQLRTRRRPPGYPIPNRCNYHWLVVSRQRGTLPIIRDALLT
RTEQRTAGGFGYIYLLCSTARPKATKAEAKERHLSASKRNMHLFSRLVCC
GPGAESNVHYSDEDSSGDEFTGSGAASAAVIRWPHDTPRRLEDAGSVRVL
PSDVKAPAERSRHPGHRK
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