prot_Ecto-sp8_S_contig10866.1250.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10866.1250.1
Unique Nameprot_Ecto-sp8_S_contig10866.1250.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length622
Homology
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: D7FVH4_ECTSI (Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH4_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 1.350e-204
Identity = 508/679 (74.82%), Postives = 516/679 (75.99%), Query Frame = 0
Query:    1 MCLEYPPTFRARLATYLSLLVNHVPPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKALAKHRDDAQRRKRIGSALGRPSMTTNKTVDGHRPSMLPPPPPKVLLSHSRGATGGGLTCGKVSTKDGSLCKGQQRASYSSKPHTHAXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPRGVPPNNARSSSSWTSKSGPPGTTNQPKACTPRPXXXXXXXXXXXXXXXXXXXXXPPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLST----------------PNLLKKPAXXXXXXXXXXXXXXXLPVTTIKGLEXXXXXXXXXXXX------------------------------------------IRMPITPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSEPTSCTGPKPPSMPKGANSVTPAGSSRLPPYGKAXXXXXXXXXXXXXXXXXXXXXXXXXCPRLLSKTHLSRRDSIGASALTKTGGAQDSADGKRPHNGGSSQMAFKAKAEACMESNCDADSIRGGGLDGKAMDRRESQLLAQDGHDNRKRSRDELTEDTSAATQGGGGKRPKTGSDSEGASSSEGDSTSTSSPGKADGTDDDEIEEGEIVEMANRPVFERACAA 621
            MCLEYPPTFRARLATYLSLLVN+VPPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKALAK RDDAQRRKRI SALGRPSMTTNKTVDG RPSM           HSRGATGGGLTCGKVSTKDGS CKGQQRASYSSKP THA                    XXXXXXXPLPRGV PNNARSSSSWTSKSGPP TT QPKACTPRPXXXXXXXXXXXXXXXXXXXXX    XXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       R  ST                 NL+KKPAXXXXXXXXXXXXXXXLPVTT  GLE   XXXXXXXXX                                          IRMPIT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSEPTSCT PKPPSMPKG NSV PAGSSRLP YGKA                         CP L SKTHLSR DSIGASALTKTG AQDSADG++  NGGSSQMAFKAK +ACMESNCDADSIRGGGLDGKAMDRRES +LAQDG DNRKRSRDE+TEDTSAATQG GGKRPKTGSDSEGAS SEGDSTSTSSPGKADGTDDDEIEEGEIVEM +RPVFERACAA
Sbjct:  233 MCLEYPPTFRARLATYLSLLVNNVPPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKALAKQRDDAQRRKRIASALGRPSMTTNKTVDGRRPSMPXXXXXXXXXLHSRGATGGGLTCGKVSTKDGSSCKGQQRASYSSKPPTHASTSKRKRMEAGAGTASNTAEXXXXXXXPLPRGVLPNNARSSSSWTSKSGPPATTTQPKACTPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVTLAARPXSTHKPXXXXXXXXXXXXXXNLVKKPAXXXXXXXXXXXXXXXLPVTTTIGLESLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIRMPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSEPTSCTWPKPPSMPKGTNSVAPAGSSRLPSYGKAPRSPSTARPSPLAKAPPATKPRPLPCPSLPSKTHLSRPDSIGASALTKTGRAQDSADGRQQCNGGSSQMAFKAKEDACMESNCDADSIRGGGLDGKAMDRRESGILAQDGRDNRKRSRDEITEDTSAATQGSGGKRPKTGSDSEGASGSEGDSTSTSSPGKADGTDDDEIEEGEIVEMPSRPVFERACAA 911          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: A0A6H5JU11_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU11_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.500e-53
Identity = 121/163 (74.23%), Postives = 129/163 (79.14%), Query Frame = 0
Query:  457 CPRLLSKTHLSRRDSIGASALTKTGGAQDSADGKRPHNGGSSQMAFKAKAEACMESNCDADSIRGGGLDGKAMDRRESQLLAQDGHDNRKRSRDELTEDTSAATQGGGGKRPKTGSDSEGASSSEGDSTSTSSPGKADGTDDDEIEEGEIVEMANRPVFERAC 619
            CPR  SKTHLSRRD+IGASALTKT GAQDSADGK   NGGSSQMA KA  +AC+E N  ADS   G +DGKA+DRRES +LAQDG DN KRSRDE TED S A QG  G RPKTGSDSEGAS SEGD+TSTSSPGKADG  DDEIE  EIVE+ NR V ERAC
Sbjct:  734 CPRPPSKTHLSRRDTIGASALTKTSGAQDSADGKGQCNGGSSQMAIKATVDACVEPNGGADSAPVGCVDGKALDRRESGILAQDGRDNWKRSRDESTEDASVAKQGNRGMRPKTGSDSEGASGSEGDTTSTSSPGKADGAGDDEIEGREIVELPNRLVLERAC 896          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: A0A6H5J9E9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E9_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.690e-36
Identity = 85/108 (78.70%), Postives = 87/108 (80.56%), Query Frame = 0
Query:  457 CPRLLSKTHLSRRDSIGASALTKTGGAQDSADGKRPHNGGSSQMAFKAKAEACMESNCDADSIRGGGLDGKAMDRRESQLLAQDGHDNRKRSRDELTEDTSAATQGGG 564
            CPRL SKTHLSR DS G SALT TG A DSADGKR  NGG SQMAFKA A+ACMES  DADS RGGGLDGK MDRRES +LAQDGHDNRKRSRDE TED SA T G G
Sbjct:  656 CPRLPSKTHLSRPDSNGDSALTNTGAALDSADGKRQFNGGGSQMAFKANADACMESKGDADSTRGGGLDGKTMDRRESGILAQDGHDNRKRSRDESTEDASAETHGSG 763          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: A0A6H5J7M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7M3_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.040e-17
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 MCLEYPPTFRARLATYLSLLVNHVPPPQSGEWTEVLQFKDPGQLER 46
            MCLEYPPTFRARLATYLSLLVNHV PPQSGEW EVLQF+DPGQLER
Sbjct:  194 MCLEYPPTFRARLATYLSLLVNHVRPPQSGEWAEVLQFEDPGQLER 239          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: D7FVH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH5_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.500e-17
Identity = 54/94 (57.45%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  397 SEPTSCTGPKPPSMPKGANSVTPAGSSRLPPYGKAXXXXXXXXXXXXXXXXXXXXXXXXXCPRLLSKTHLSRRDSIGASALTKTGGAQDSADGK 490
            SEP SCTG KP  +PKG +SV PAGSSRLP Y KA                         CPRL SKTHLSR DSI ASALTKTGGAQDSAD +
Sbjct:  109 SEPISCTGLKPLLIPKGTSSVAPAGSSRLPSYDKAPRPPLTARRTPLGKAPPAKKPRPPPCPRLPSKTHLSRPDSIAASALTKTGGAQDSADAR 202          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: A0A6H5JJ90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ90_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.440e-16
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 MCLEYPPTFRARLATYLSLLVNHVPPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKAL 75
            +CLEYPPTFRARL TYLSLLVN++ PP  G W E+++F+D  QL RA  + LETLD+D+GK+G KIT+ RV  AL
Sbjct:   46 LCLEYPPTFRARLVTYLSLLVNNISPPPGG-WAEMIEFEDHRQLNRAACQLLETLDDDSGKTGKKITKKRVAAAL 119          
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Match: D7FIA6_ECTSI (Similar to cyclin T2 isoform b isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA6_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 7.640e-16
Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:    1 MCLEYPPTFRARLATYLSLLVNHVPPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKAL 75
            +CLEYPPTFRARL TYLSLLVN++ PP  G W E+++F+D  +L RA  + LETLD+D+GK+G KIT+ RV  AL
Sbjct:  224 LCLEYPPTFRARLVTYLSLLVNNISPPPGG-WAEMIEFEDHRRLNRAACQLLETLDDDSGKTGKKITKKRVAAAL 297          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10866.1250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVH4_ECTSI1.350e-20474.82Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU11_9PHAE1.500e-5374.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J9E9_9PHAE3.690e-3678.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J7M3_9PHAE3.040e-1793.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVH5_ECTSI5.500e-1757.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ90_9PHAE1.440e-1662.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIA6_ECTSI7.640e-1661.33Similar to cyclin T2 isoform b isoform 9 n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 248..273
score: 34.62
coord: 204..220
score: 42.35
coord: 229..246
score: 37.78
coord: 183..204
score: 32.73
coord: 102..114
score: 38.46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10866contigEcto-sp8_S_contig10866:4127..6601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10866.1250.1mRNA_Ecto-sp8_S_contig10866.1250.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10866 4127..6622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10866.1250.1 ID=prot_Ecto-sp8_S_contig10866.1250.1|Name=mRNA_Ecto-sp8_S_contig10866.1250.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=622bp
MCLEYPPTFRARLATYLSLLVNHVPPPQSGEWTEVLQFKDPGQLERATEE
WLETLDNDTGKSGTKITRHRVTKALAKHRDDAQRRKRIGSALGRPSMTTN
KTVDGHRPSMLPPPPPKVLLSHSRGATGGGLTCGKVSTKDGSLCKGQQRA
SYSSKPHTHASTSKRKRMEAGAGTASDTAEKRPRPRPPLPRGVPPNNARS
SSSWTSKSGPPGTTNQPKACTPRPPSTPKPRPPNTPKPRPPTTPRPPSMP
KPPRRSTPLPPNTPKPKKSFTPPPLSAPKLPVTLAARPPSTHKPRPPTTP
KPRQLSTPNLLKKPAPRPPTTPKPLQTSTPLPVTTIKGLESPTHRPPSTL
KPIRMPITPPPPCTPKSLTSSAPLPVSTLMPPVTPTTRTPSAPEPKSEPT
SCTGPKPPSMPKGANSVTPAGSSRLPPYGKAPRSPSTARPSPLAKAPPAT
KPKPPPCPRLLSKTHLSRRDSIGASALTKTGGAQDSADGKRPHNGGSSQM
AFKAKAEACMESNCDADSIRGGGLDGKAMDRRESQLLAQDGHDNRKRSRD
ELTEDTSAATQGGGGKRPKTGSDSEGASSSEGDSTSTSSPGKADGTDDDE
IEEGEIVEMANRPVFERACAA*
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