prot_Ecto-sp8_S_contig10635.997.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10635.997.1
Unique Nameprot_Ecto-sp8_S_contig10635.997.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 9.270e-112
Identity = 194/212 (91.51%), Postives = 195/212 (91.98%), Query Frame = 0
Query:    1 QAFVPPRPXXXXXXXXXXXXXXXXXXXXXXXXSRLDFLRGAGAAAATAAAGFALLPAAGNAQTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKAGKTIDSLIASVTKKK 212
            QAFVP  P  XXXXXXXXXXXXXXXXXXXXXX RLDFLRGA         GFALLPAAGNAQTFTDDALGF FDVPDGWERNDAEISGRRKIVVYTSPTTPG NAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRM+ESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAK GKTIDSLIASVTKKK
Sbjct:   19 QAFVPSSPPAXXXXXXXXXXXXXXXXXXXXXXXRLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKKK 230          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.910e-41
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   50 AGFALLPAAGNAQTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKAGKTID 202
            A  AL   A     + DD   F F+VP GW + + EISGRRK+V++TS  +   NAF+A TP RGDFT+LGSFGT DEVS+T++P   G+S  M+   +  + Y YDYI+ QEGRPEKH+K++W +      L T+TAQC+E++Y      +D
Sbjct:    4 AALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGS--ANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 144 bits (363), Expect = 1.850e-39
Identity = 67/145 (46.21%), Postives = 97/145 (66.90%), Query Frame = 0
Query:   65 TDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ--LATITAQCNESDYAKAGKTIDSLIAS 207
            TD    + F VP GWE+++A ISG R + ++ +P  P  NAFVA TP RGD+T+LGSFG LD V  TV+P+  G+ SR +ES + + +Y YDY V QEGRPEK +KT++ + P++    L T TAQC+ +DY + G  + ++ +S
Sbjct:   80 TDTKGAYSFQVPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGTLLSAIASS 224          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 119 bits (299), Expect = 6.130e-30
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   61 AQTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLP---------EASGVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ---LATITAQCNESDYAKAGKTIDSLIAS 207
            A  + D   G  F VP GW   ++E+SG RK++  T P     N FVA+TP RGD+T+LGSFG +D V  T+LP         E  G+  +M+   T + +Y++DY+++Q G+P + ++T++ +   +G+   L T+TAQC +  Y +   T+  ++ S
Sbjct:   62 ANEYVDQEYGVSFVVPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLRTLFSVQTVEGRGQNLITLTAQCRQERYDELSTTLREIVDS 220          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A7S0LK65_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LK65_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 1.790e-28
Identity = 56/158 (35.44%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   62 QTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASG---------VSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ---LATITAQCNESDYAKAGKTIDSLIAS 207
            QT+ D   G  F +P GW   ++E+SG RK+V    P+    N F+AYTP   D+T+LGSFG +D V  T+LP+ +G         +  +M+   T  ++YV+DY ++Q G+P + ++T++ +  E G+   L T+TAQC ++ Y +   T+ ++I S
Sbjct:   77 QTYVDKEYGVSFGLPAGWNPTESELSGGRKLVAAADPSDVDFNIFIAYTPIAADYTSLGSFGNIDSVGLTLLPQCAGSSCSLASDGIQGKMISQATQSSAYVFDYSIEQIGQPIRRLRTLFSVQTEVGRGKNLVTLTAQCKQARYDELAPTLRAVIDS 234          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A7S2FED2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FED2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.450e-26
Identity = 59/150 (39.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:   60 NAQTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNSYVYDYIVDQEG-RPEKHIKTMWVLFPEQGQLATITAQCNESDYAKAG----KTIDSL 204
             +QT++D A G  F VP  W ++  +I G RK+V+Y  P     NAFV +TP   D+  LGSFGT+D V++TV+PE  G+ S +++S   K +Y +DY +     +P +H+ T++ + P Q  L T +AQ  E++YAK      K IDS 
Sbjct:   61 ESQTYSDLATGTSFSVPGTWSQS-VQILGDRKLVLYVDPENTETNAFVLFTPVAADYRGLGSFGTIDLVARTVIPEGPGIESNLLDSKQVKGNYFFDYTIKASADQPIRHLLTIFAVVPGQ-MLVTYSAQTTEANYAKEKALLMKAIDSF 208          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: B7FU11_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU11_PHATC)

HSP 1 Score: 105 bits (261), Expect = 2.460e-24
Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 0
Query:   45 AATAAAGFALLPAAGNAQTFT---DDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVS-KTVLPEAS----GVSSRMVESYTYKNSYVYDYIVDQEG-RPEKHIKTMWVLFPEQGQ-------LATITAQCNESDYA-KAGKTIDSLIASVTKKK 212
            A+ AA GF     A +  T T   D   GF  DVP  W R + ++S RR IVV+T P     + FVAYTP R DFT+LGSFG++D+V+ +T+LP+A      V + M+ + + K +Y +DY       +P  H +T++ L  +QG        L T+TAQC E  YA K     DS++ S  K K
Sbjct:   41 ASAAAVGFPSTAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQAVPNVQPPTHFRTIFTL--QQGATGGAGAVLVTLTAQCPEELYATKYQSLFDSILDSYAKSK 223          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 1.610e-23
Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 0
Query:   63 TFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPE---------ASG--VSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ--LATITAQCNESDYAKAGKTIDSLIAS 207
            ++ D+  G  F +P+G+     E++  R++V  T P     N F+A+TP R D+T+LGSFGT+D +  T+LP+         ASG  +   M+E  + K S+VYDY + Q+G P +H++++  +  +     L T+TAQC E  +A    T  ++I S
Sbjct:   56 SYKDERYGVSFLLPEGYVMKPQELADGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLRSLLAIKADGAASVLITLTAQCLEPKHAAVAATFKAIIES 213          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: A0A7S1XXW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.180e-22
Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 0
Query:   75 VPDGWERNDAEIS-GRRKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNS--YVYDYIVDQEGRPEKHIKTMWVLFPEQG-----QLATITAQCNESDYAKAGK-TIDSLIAS 207
            VP  W R +A  + G+   V Y SP     NA +AYTP RGDFT+LGSFGT+ +V K +LP+   V+ RM+ +   +++  YV+DY+V+  G P +H+KT++ L P+        + ++TAQ  ESD+    + T+D ++ S
Sbjct:   28 VPGDWRRQEAPAAAGQIPAVAYLSPRGASFNAVLAYTPVRGDFTSLGSFGTIKDVEKFILPD--NVNGRMISAKATRSNKAYVFDYVVEAPGAPVRHLKTLFALVPQNKATDIPSIISLTAQVLESDFNSGVEATMDGILDS 167          
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Match: W7TLE2_9STRA (Psbp domain-containing protein chloroplastic-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLE2_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.390e-22
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 0
Query:   58 AGNAQTFTDDALGFIFD-VPDGWERNDAEISGR----RKIVVYTSPTTPGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ---LATITAQCNESDYAKAGKTIDSLIAS 207
            A   Q++ D+     F+ +P  W R D  I       R+IVV+  P++   N F+AYTP + DFTTLG+FG++ +V+KT++P+  GV S+++     K +Y YDY++   G+P++H+ T++ L    G    LAT T  C E  +       D++  S
Sbjct:  109 AAGEQSYFDEKYKVAFEHIPAKWGRTDTTIGTNNLDPRRIVVFKDPSSEA-NVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLNYEGRKGAYYYDYVIQPAGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWTVLEPVFDNITKS 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10635.997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF3_ECTSI9.270e-11291.51PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA4.910e-4147.06PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1S113_HETAK1.850e-3946.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EZ64_CHRCT6.130e-3035.22Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0LK65_9EUKA1.790e-2835.44Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2FED2_9STRA4.450e-2639.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7FU11_PHATC2.460e-2438.92Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A0M0J7U2_9EUKA1.610e-2334.18Psbp domain-containing protein chloroplastic-like ... [more]
A0A7S1XXW5_9STRA1.180e-2238.73Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TLE2_9STRA1.390e-2234.18Psbp domain-containing protein chloroplastic-like ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 57..209
e-value: 5.3E-12
score: 47.9
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 62..207
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 61..207
e-value: 6.6E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR31407:SF17PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTICcoord: 31..208
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 31..208
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..61
score: 7.882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10635contigEcto-sp8_S_contig10635:246..4391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10635.997.1mRNA_Ecto-sp8_S_contig10635.997.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10635 246..4391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10635.997.1 ID=prot_Ecto-sp8_S_contig10635.997.1|Name=mRNA_Ecto-sp8_S_contig10635.997.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=213bp
QAFVPPRPPPASSPPPPATGGGETASSSAAAASRLDFLRGAGAAAATAAA
GFALLPAAGNAQTFTDDALGFIFDVPDGWERNDAEISGRRKIVVYTSPTT
PGVNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMVESYTYK
NSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKAGKT
IDSLIASVTKKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP_C
IPR006311TAT_signal