prot_Ecto-sp8_S_contig10608.958.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig10608.958.1
Unique Name	prot_Ecto-sp8_S_contig10608.958.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	545

Homology

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BLAST of mRNA_Ecto-sp8_S_contig10608.958.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 706 bits (1821), Expect = 1.710e-234
Identity = 465/545 (85.32%), Postives = 480/545 (88.07%), Query Frame = 0

Query:   10 GRG---VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEMDEDLTQRVVPGASRGQVAFQARGLDLNSNKASARAKPRGRRKAXXXXXXXXXXXXXXXXXXXXAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGAQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKXXXXXXXXXXKAMAERESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKKDSGNNAREEGEDADVLKVMAESRRQHEAMQELRLVHGDMSSVRPQFQGAAGTTMTALAYAGDQANHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVPMAPDWLVSELPVPAPAGAGGFVQAPRQGYQGQAYSAGMDRGHAATPPAPRPXXXXXXXXXXXXXXXXXXXXXXXXXX--GVHMQTTYPGLEPTMAQHAYSVQQQQQ----QPMRIPARFDDGNVGVPPXXXXXVPIGVP 545
            GRG   VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKE+DEDLT+RVVPGASRGQVAFQARGLDLNSNKASA AKPRGRR  XXXXXXXXXXXXXXXXX    WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPG QFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREK          KAMAE ESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASK+DS  NAREEGEDADVLKVM ESRRQHEAMQELR VHGDMSSV P  Q AA T  TA++YAGDQ NH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT VPMAPDWLVSELPV APAGA GF+QAPRQGYQGQAYSAGM++GH ATPP    XXXXXXXXXXXXXXXX            GVHM+TT+PGLEPT +QHAYSVQ+QQ     QPMRIPARFDDGN+ +PPXXX   P+GVP
Sbjct:  851 GRGGVSVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEVDEDLTKRVVPGASRGQVAFQARGLDLNSNKASALAKPRGRRHGXXXXXXXXXXXXXXXXX----WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRREAHAKARVKAMAECESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKRDSEYNAREEGEDADVLKVMVESRRQHEAMQELRRVHGDMSSVPPHSQSAAETATTAVSYAGDQTNHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-VPMAPDWLVSELPVAAPAGAAGFMQAPRQGYQGQAYSAGMNQGHTATPPTXXXXXXXXXXXXXXXXXXXAVYAPHATGDCGGVHMETTHPGLEPTNSQHAYSVQEQQXXXXXQPMRIPARFDDGNLAMPPXXXATAPVGVP 1390

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BLAST of mRNA_Ecto-sp8_S_contig10608.958.1 vs. uniprot
Match: D7FRG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 7.820e-110
Identity = 207/227 (91.19%), Postives = 209/227 (92.07%), Query Frame = 0

Query:   59 MDEDLTQRVVPGASRGQVAFQARGLDLNSNKASARAKPRGRRKAXXXXXXXXXXXXXXXXXXXXAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGAQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKXXXXXXXXXXKAMAERESLQRDEEKQLMEVIKASLVE 285
            MDEDLT RVVPGAS+GQVAFQARGL+LNSNKASARAKPRGRRKAXXXXXXX             AWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPG QFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAER  XXXXXXXXXX AMAERESLQRDEEKQLMEVIKASLVE
Sbjct:    1 MDEDLTNRVVPGASKGQVAFQARGLELNSNKASARAKPRGRRKAXXXXXXXLRTVKEEKEE---AWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVE 224

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig10608.958.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig10608.958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J997_9PHAE	1.710e-234	85.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRG7_ECTSI	7.820e-110	91.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 244..264
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 374..386 score: 30.77 coord: 447..468 score: 33.64 coord: 470..486 score: 47.06 coord: 529..541 score: 46.15 coord: 392..408 score: 41.18

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig10608	contig	Ecto-sp8_S_contig10608:943..6633 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig10608.958.1	mRNA_Ecto-sp8_S_contig10608.958.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig10608 943..6635 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig10608.958.1 ID=prot_Ecto-sp8_S_contig10608.958.1|Name=mRNA_Ecto-sp8_S_contig10608.958.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=545bp
RIEEAQIVSGRGVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTW
KTTPKNKEMDEDLTQRVVPGASRGQVAFQARGLDLNSNKASARAKPRGRR
KAGGGGGGGGGGLRAVKEEEEEAWEAASRKRRGQKETRVAPHSYVVRKTA
AAPFWLSPGAQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEA
MRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRR
EAQAKARVKAMAERESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAA
LEASKKDSGNNAREEGEDADVLKVMAESRRQHEAMQELRLVHGDMSSVRP
QFQGAAGTTMTALAYAGDQANHHPPPTQAAAAPPVVEDQSVPTTLSAAPP
APPPPPPPTAVPMAPDWLVSELPVPAPAGAGGFVQAPRQGYQGQAYSAGM
DRGHAATPPAPRPPPPPPPPPPPPTPPVYAPHATGGGGGGVHMQTTYPGL
EPTMAQHAYSVQQQQQQPMRIPARFDDGNVGVPPPPPPPVPIGVP