prot_Ecto-sp8_S_contig1050.786.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1050.786.1
Unique Nameprot_Ecto-sp8_S_contig1050.786.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: D7G914_ECTSI (ER membrane protein complex subunit 10 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G914_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 1.280e-149
Identity = 219/232 (94.40%), Postives = 223/232 (96.12%), Query Frame = 0
Query:    1 MKSLKTATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVKYWYIFLPCVLLYMFSAPDQGGAXXXXXXXGGR 232
            MKSLKTATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATL+DASQMEEL+ANDGLYL+RVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKS VGPLASTRNCTKMPV EYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVKYWYIFLPCVLL+MFSAPDQGGA       GGR
Sbjct:    1 MKSLKTATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATLRDASQMEELIANDGLYLIRVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSLVGPLASTRNCTKMPVAEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVKYWYIFLPCVLLFMFSAPDQGGAATPPAAGGGR 232          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: A0A7S4D4Q0_HETAK (ER membrane protein complex subunit 10 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Q0_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 1.680e-19
Identity = 65/185 (35.14%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   23 LSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQ---DASQMEELVANDGLYLVRVATDESS--NQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKE---QIGTKDAKAA-GNQSLL 198
            L VEH+F   ++++ R   E+ I P   +     LQ +      + +Q+++L+AN G Y +R+ ++ ++  +  V+AA+SAC L  A+FREEI LH++    I+G+ Y +P   LA  R+C   P+ E  +  TK+ V  A+  QSVPLQ     PPPGL+ L++     G +D K    +QS L
Sbjct:   52 LQVEHSFTEDSKFSPREDWEMAISPVSRQLTVDKLQGSAQSSGMERNQIKDLIANGGFYRIRLHSNPTNPDSPMVMAAISACDLHKANFREEIVLHLDPHQNIIGMTYSAPSSVLA--RDCHSKPLPEDIKFDTKIKVAEASIGQSVPLQAQAARPPPGLAGLQKFRAAAGGEDGKGGPASQSFL 234          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: A0A7S2S2Z1_9STRA (ER membrane protein complex subunit 10 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S2Z1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.360e-15
Identity = 61/213 (28.64%), Postives = 100/213 (46.95%), Query Frame = 0
Query:   23 LSVEHAFGPAAEWTHRGFLELDIDPSRAKA---FSASLQPATLQDASQMEELVANDGLYLVRVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNC--TKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQS--------LLVKYWYIFLPCVLLYMFSA--PDQG 220
            L+VEH+FGP   W  RG + L ++  + K    FS +       D    + L+ N+G Y VR+ + +  +  + A++ AC L    FRE +  H++++  ++G D+     P+  TR C  +K   L+  ++V+K         Q VP   +    P G SA      T +  A G+           L KYWY+FLP VL+ +     P++G
Sbjct:   33 LAVEHSFGPGV-WKERGTIGLTVNTEKKKVALRFSTTSLNFEKDDREAFDALLKNNGFYRVRIRS-QFGDSWLTASIPACVLAAGHFRENLRFHIDKNAALIGFDHI----PVVKTRGCDASKYLGLDSIKLVSKGSASLPQEGQHVPKNAIPVGIPQG-SAGANVAQTMEKSAGGDSGEKQEEEPHFLRKYWYVFLPLVLISVLGPGPPEEG 238          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: A0A7S3PTA5_9STRA (ER membrane protein complex subunit 10 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PTA5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.600e-11
Identity = 62/228 (27.19%), Postives = 106/228 (46.49%), Query Frame = 0
Query:   25 VEHAFGPAAEWTHRGFLELDIDPSRAKA---FSASLQPATLQDASQMEELVANDGLYLVRVAT--DESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVT--KVVVVRAASAQSVPLQV----------------LQNSPPPGLSALKE-QIGTKDAKAAG----NQSLLVKYWYIFLPCVLLYMF--SAPDQGGA 222
            ++H+F    ++  RG L + +     K    FS+     +  +   M++LV N+ LY VR+    D+ S+  +VA++ ACQ+    F+E    H+++ G I   +  S            K P  E S+ ++  K VV+++ +  S+P +                 + N PP     ++E +  +KD K A     NQS + KYWY+FLP +L+ +F  S   Q GA
Sbjct:   57 IQHSFSYDGQFVDRGKLLVQVMKKSKKISIKFSSKTYEFSSDEMKGMKKLVENNRLYRVRIPLKPDDPSSPWLVASIPACQMLENDFKESFRFHLDKSGTITSFELSS------------KTPSRECSQGLSFPKSVVLKSKAVASIPKEAHGAPKRGGLNDSKGAKVANMPPELQGVIEENKPKSKDGKEAEEEAENQSFVRKYWYLFLPMLLMSVFGGSPEPQAGA 272          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: A0A6P8SKT0_GEOSA (ER membrane protein complex subunit 10 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SKT0_GEOSA)

HSP 1 Score: 64.3 bits (155), Expect = 9.850e-9
Identity = 58/213 (27.23%), Postives = 100/213 (46.95%), Query Frame = 0
Query:   20 ARSLSVEHAF--GPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRV----ATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYS-EVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFS-APDQG 220
            A  + +EH+F    +  +T RG   L  +P+   + + S +  T ++  ++ ++ + +G+Y +R+      DE S QHV + V AC +  +   ++IT+H +  G I+GV   +  G      +CT   V +   E+    V V+   A +VP            +A  E++  + A+ A N    +S   KYW   +P VL  M S APD G
Sbjct:   40 ALEVQLEHSFELDSSIRFTKRG--SLLWNPASEGSVTISQKQLTEEERIKLRDIASLNGVYRIRIPRKPGLDEGSVQHVTSFVPACSMVESHLSDQITIHTDLAGNIIGVSIVTVPG------SCTGAEVEDVDLELFNTTVQVQQPVAAAVP----------ETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPIVLFLMMSGAPDTG 234          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: A0A8C8S1I8_9SAUR (ER membrane protein complex subunit 10 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8S1I8_9SAUR)

HSP 1 Score: 62.4 bits (150), Expect = 4.930e-8
Identity = 56/213 (26.29%), Postives = 96/213 (45.07%), Query Frame = 0
Query:   22 SLSVEHAFGP--AAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRVAT------DESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFS-APDQGG 221
            SL +EH+F P  +  +  RG L   + P    + S + +  + ++ S++ ++ A +GLY VR+        +E+  ++V + V AC L  +   +++T+H +  G ++GV   +  G              E  +V  +         Q VP  V      P  +A  E++  + A+ A N    +S   KYW   +P VL  M S APD GG
Sbjct:   46 SLQLEHSFEPDDSIHFRKRGTLLWSLAPE--SSLSLTQKQLSEEEHSKLRDVAALNGLYRVRIPRQPLGIGEEAGAEYVSSFVRACSLVDSHLSDQLTVHTDGAGNVIGVSIVTVPGSCHGA---------EVEDVDLEAFNTTVLLQQPVPAAV------PETAAFIERLEMEQAQRAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDAGG 241          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: UPI0018E85024 (ER membrane protein complex subunit 10 isoform X1 n=4 Tax=Durocryptodira TaxID=1579337 RepID=UPI0018E85024)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-7
Identity = 57/216 (26.39%), Postives = 95/216 (43.98%), Query Frame = 0
Query:   17 QASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRV------ATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFS-APDQGG 221
            +A   +L +EH+F P      R    L   P    + S S +    ++ +++ ++ A +GLY VR+        +E+   +V + V AC L  +   +++T+H +  G ++GV   +  G      +C   P  E  +V  +         Q VP  V      P  +A  E++  + A+ A N    +S   KYW   +P VL  M S APD GG
Sbjct:   51 EACVLTLQLEHSFEPDDSIHFRKRGTLLWSPVPEPSLSLSQKQLCEEERTKLRDVAALNGLYRVRIPRRPLGTVEEAGAGYVTSFVRACSLVDSHLSDQLTVHTDGAGNVIGVSIVTVPG------SC---PGAEVEDVDLEAFNTTVLLQQPVPAAV------PETAAFIERLELEQAQRAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDAGG 251          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: UPI001E1DD8C3 (ER membrane protein complex subunit 10 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1DD8C3)

HSP 1 Score: 58.5 bits (140), Expect = 9.810e-7
Identity = 51/181 (28.18%), Postives = 82/181 (45.30%), Query Frame = 0
Query:   52 AFSASLQPATLQDASQMEELVANDGLYLVRVATDESSNQ------HVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFS-APDQGG 221
            + S S +  + +D S++ ++ A +GLY +RV     + +      HV + V AC L  +   +++TLHV+  G +VGV   +  G       C    V +    +            +V LQ    +P P  +A  E++  + A+ A N    +S   KYW   +P VL  M S APD GG
Sbjct:   59 SLSLSQRQLSEEDRSRLRDVAAVNGLYRLRVPRRPGATEGLEAGGHVSSFVPACSLVESHLSDQLTLHVDIAGNVVGVSVVTQPG------GCRGHEVEDVDLELFNT---------TVQLQPPTTAPGPETAAFIERLEMEQAQRAKNPQEQKSFFAKYWMYIIPFVLFLMMSGAPDAGG 224          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: UPI001128ED8F (ER membrane protein complex subunit 10 isoform X1 n=2 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001128ED8F)

HSP 1 Score: 57.4 bits (137), Expect = 2.760e-6
Identity = 56/208 (26.92%), Postives = 99/208 (47.60%), Query Frame = 0
Query:   25 VEHAF--GPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRV----ATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYS-EVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFS-APDQG 220
            +EH+F    +  +T RG L L   P  A + + S +  T ++ +++ ++ + +G+Y +R+     TD  S ++V + V AC +  +   ++IT+H +  G I+GV   +  G      +C+   V +   E+    V V+   A +VP            +A  E++  + A+ A N    +S   KYW   +P VL  M S APD G
Sbjct:   48 LEHSFELDDSIHYTKRGSL-LWSTPLEA-SITLSQKQLTEEERNKLRDIASLNGIYRLRIPRKLGTDGDSAEYVTSFVPACSMVESHLSDQITVHTDIAGNIIGVSIVTVPG------SCSGAEVEDVDLELFNTTVQVQQPVAAAVP----------ETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPIVLFLMMSGAPDAG 237          
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Match: UPI000854FDC3 (ER membrane protein complex subunit 10 isoform X1 n=2 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854FDC3)

HSP 1 Score: 57.0 bits (136), Expect = 4.410e-6
Identity = 50/210 (23.81%), Postives = 95/210 (45.24%), Query Frame = 0
Query:   22 SLSVEHAF--GPAAEWTHRGFLELDIDPSRAKAFSASLQPATLQDASQMEELVANDGLYLVRV----ATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGN----QSLLVKYWYIFLPCVLLYMFSAPDQGG 221
            ++ +EH+F    +  +  RG   L ++PS  ++ S   +  T  + +++ ++   +GLY VR+       E S+ +V + V AC +  +   +++T+H +  G IVG+     +  L  + N  ++  ++  +  T V +      Q +P  V      P  +A  E++  + A  A N    +S   KYW   +P VL  M S     G
Sbjct:   67 NIDLEHSFELDDSIHFKKRG--SLILNPSPDQSVSILQKQLTEDERNRLRDIANLNGLYRVRIPHKLGLSEESSHYVTSFVRACSMVESHLSDQLTVHTDISGNIVGIS----IVTLPGSCNGVEVEDVDLEQFNTTVYI-----QQPIPAAV------PETAAFIERLEMEQAHKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGASDAG 259          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1050.786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G914_ECTSI1.280e-14994.40ER membrane protein complex subunit 10 n=1 Tax=Ect... [more]
A0A7S4D4Q0_HETAK1.680e-1935.14ER membrane protein complex subunit 10 (Fragment) ... [more]
A0A7S2S2Z1_9STRA2.360e-1528.64ER membrane protein complex subunit 10 n=1 Tax=lab... [more]
A0A7S3PTA5_9STRA3.600e-1127.19ER membrane protein complex subunit 10 n=1 Tax=Apl... [more]
A0A6P8SKT0_GEOSA9.850e-927.23ER membrane protein complex subunit 10 n=2 Tax=Geo... [more]
A0A8C8S1I8_9SAUR4.930e-826.29ER membrane protein complex subunit 10 n=1 Tax=Pel... [more]
UPI0018E850241.020e-726.39ER membrane protein complex subunit 10 isoform X1 ... [more]
UPI001E1DD8C39.810e-728.18ER membrane protein complex subunit 10 n=1 Tax=Ech... [more]
UPI001128ED8F2.760e-626.92ER membrane protein complex subunit 10 isoform X1 ... [more]
UPI000854FDC34.410e-623.81ER membrane protein complex subunit 10 isoform X1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR39219FAMILY NOT NAMEDcoord: 13..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableTMHMMTMhelixcoord: 197..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1050contigEcto-sp8_S_contig1050:1591..5948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1050.786.1mRNA_Ecto-sp8_S_contig1050.786.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1050 1591..5948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1050.786.1 ID=prot_Ecto-sp8_S_contig1050.786.1|Name=mRNA_Ecto-sp8_S_contig1050.786.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=233bp
MKSLKTATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRA
KAFSASLQPATLQDASQMEELVANDGLYLVRVATDESSNQHVVAAVSACQ
LRLASFREEITLHVERDGVIVGVDYKSPVGPLASTRNCTKMPVLEYSEVV
TKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVK
YWYIFLPCVLLYMFSAPDQGGAAAPPAAGGGR*
back to top