prot_Ecto-sp8_S_contig1049.770.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1049.770.1
Unique Nameprot_Ecto-sp8_S_contig1049.770.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length398
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1049.770.1 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 9.430e-229
Identity = 356/397 (89.67%), Postives = 360/397 (90.68%), Query Frame = 0 
Query:    1 MNAPLLAGLHFDRALELDKGCVAAATHKKNLRQVSSKGTSAPSAACAGESHQTPXXXXXXXXXXXTAAIHHGSPTNLSSRVGCGGNVGDQGGLAVAGDVGVETPAPAEDGAVSTPEATEHPVVVAETPDEEGNRGVAPTAAXXXXXXXXXAAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEELDKATAAGLGMHAAVARQDKGGESAAGEIPSEKAGCGDGCERLDGKSEEASSGSQARATSKCGGERSKGGHAATVVRNMRVGCHLNIAASFLLCKTDLESAVIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVSASVRDGHRRGEGSEALAGELAEVVKRLQHARWTKVHVGNGKDELPRV 397
            MNAPLLAGLHFDRALELDKGCVAAATHK+NLR VSSKGTSA SAACA ESHQTP              IHHGSPTNLSSRVGCGGNVGDQG LAVAGDVGVETPAPAEDGA+ T EATE P V AETPDEEGN GVAPTAA XXXXXX  AAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLE LDKATAAGLGMHAAVARQDKGGESAAG+ PSEKAGCGDGCE LDGKSEEASSGSQ RATSKCGGER KGGHA TVVRNMRVGCHLNIAASFLL KTDLESA IHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASV ASVRDGHRRGEGSEALAGELAEVVKRL+HARWTKVHVGNG DELPRV
Sbjct:  303 MNAPLLAGLHFDRALELDKGCVAAATHKQNLRHVSSKGTSAASAACADESHQTPAAAGDTDAAPQKMTIHHGSPTNLSSRVGCGGNVGDQGSLAVAGDVGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRRGEGSEALAGELAEVVKRLEHARWTKVHVGNGNDELPRV 699
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1049.770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB22_ECTSI9.430e-22989.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 249..355
e-value: 2.4E-14
score: 55.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 273..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1049contigEcto-sp8_S_contig1049:4327..6027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1049.770.1mRNA_Ecto-sp8_S_contig1049.770.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1049 4200..10374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1049.770.1 ID=prot_Ecto-sp8_S_contig1049.770.1|Name=mRNA_Ecto-sp8_S_contig1049.770.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=398bp
MNAPLLAGLHFDRALELDKGCVAAATHKKNLRQVSSKGTSAPSAACAGES
HQTPAAAGDTDAAPQTAAIHHGSPTNLSSRVGCGGNVGDQGGLAVAGDVG
VETPAPAEDGAVSTPEATEHPVVVAETPDEEGNRGVAPTAAASSSAGGDR
AAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRV
LEELDKATAAGLGMHAAVARQDKGGESAAGEIPSEKAGCGDGCERLDGKS
EEASSGSQARATSKCGGERSKGGHAATVVRNMRVGCHLNIAASFLLCKTD
LESAVIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVS
ASVRDGHRRGEGSEALAGELAEVVKRLQHARWTKVHVGNGKDELPRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf