prot_Ecto-sp8_S_contig10455.725.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10455.725.1
Unique Nameprot_Ecto-sp8_S_contig10455.725.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length381
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10455.725.1 vs. uniprot
Match: D8LDS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS9_ECTSI)

HSP 1 Score: 630 bits (1625), Expect = 1.780e-220
Identity = 355/374 (94.92%), Postives = 362/374 (96.79%), Query Frame = 0 
Query:    1 DRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAVISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEDAVADLSRAVEMSDPSPASLHYLAKALKAVGQEKRALTVLGEALEKWEHMAPAAPVGGGPSSDNTGRHEAFFDRGVIRLGRGDDGGALLDFNKAVELSKGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDEQEAASTSRERTETGNKHVASRAACEFENFTASIAVNGRQPEGFLLRGRSLAGLSRQGQFQRD 374
            DRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAVISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAE+AVADLSRAVEMSDPSPASL YLAKALKAVGQEKRALTVLGEAL+KWEHMAPAA +GGGPSSDNTGRHEAFFDRGVIRLG GDD GALLDFNKAVELS GGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFD+QEAAST RE+TETGNK VASRAACEFENFTASIAVNG++PEGFLLRGRSLAGLS   Q  RD
Sbjct:   43 DRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAVISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASLQYLAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFFDRGVIRLGHGDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDKQEAAST-REKTETGNKDVASRAACEFENFTASIAVNGQRPEGFLLRGRSLAGLSSHEQAIRD 415
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10455.725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDS9_ECTSI1.780e-22094.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 119..152
e-value: 35.0
score: 10.2
coord: 45..78
e-value: 0.0097
score: 25.1
coord: 204..237
e-value: 41.0
score: 9.6
coord: 280..313
e-value: 110.0
score: 5.9
coord: 11..44
e-value: 13.0
score: 13.8
coord: 153..186
e-value: 110.0
score: 5.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 280..313
score: 5.369
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 11..44
score: 5.133
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 119..152
score: 5.93
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 204..237
score: 6.579
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 45..78
score: 8.201
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..118
e-value: 4.1E-14
score: 54.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 119..372
e-value: 2.2E-20
score: 75.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..181
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 201..308
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 205..299
coord: 123..182
coord: 1..115
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..313
score: 17.042

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10455contigEcto-sp8_S_contig10455:2..6372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10455.725.1mRNA_Ecto-sp8_S_contig10455.725.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10455 2..6372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10455.725.1 ID=prot_Ecto-sp8_S_contig10455.725.1|Name=mRNA_Ecto-sp8_S_contig10455.725.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=381bp
DRAIAFRVDCSHYFAARANCKQAMGKFVDAYHDYVSAIRLNASKCTYFSC
RGLCLIKMGKLDVALDDFTKACELEPTVAVHHYQRASLLHHRLARPGQAV
ISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEDAVADLSRAVEMSD
PSPASLHYLAKALKAVGQEKRALTVLGEALEKWEHMAPAAPVGGGPSSDN
TGRHEAFFDRGVIRLGRGDDGGALLDFNKAVELSKGGRGEYFVQRARARA
RVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAM
GHLQLLLRSFDEQEAASTSRERTETGNKHVASRAACEFENFTASIAVNGR
QPEGFLLRGRSLAGLSRQGQFQRDQACKSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom