prot_Ecto-sp8_S_contig104544.721.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig104544.721.1
Unique Name	prot_Ecto-sp8_S_contig104544.721.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	173

Homology

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI000C77F642 (T-complex protein 1 subunit gamma-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77F642)

HSP 1 Score: 305 bits (780), Expect = 6.080e-99
Identity = 148/173 (85.55%), Postives = 165/173 (95.38%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTLA 173
            ++I+AFKPDL+ITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEI+E +IGTG GLFE+RKIGDEYFTF+E+C+DPKACTILLRGASKDILNEVERNLQDALNVARNL+ +P LVPGGGATEME+A+LL Q AKSL+GVI WPYKAIA+ LEVIPRT+A
Sbjct:  281 DDILAFKPDLVITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEISEDNIGTGAGLFEVRKIGDEYFTFIEECEDPKACTILLRGASKDILNEVERNLQDALNVARNLWMEPALVPGGGATEMEIAYLLTQMAKSLNGVIQWPYKAIASALEVIPRTIA 453

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: A0A7T8QX80_CALRO (T-complex protein 1 subunit gamma n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8QX80_CALRO)

HSP 1 Score: 274 bits (700), Expect = 2.760e-89
Identity = 132/172 (76.74%), Postives = 154/172 (89.53%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            +EIIAFKPD++ITEKGVSDLAQH+  KAGITA+RRLRK+DNLRVARACGATIV+RTDEITE DIGT  GLFE+RKIGDEYF+F+EKC+DPKACTILLRGASKDILNEVERNLQDAL+VARN+  DP LVPGGGA EMEV   + +K+K   G+I WPYK++A+ LE+IP+TL
Sbjct:   96 DEIIAFKPDVVITEKGVSDLAQHYLLKAGITALRRLRKTDNLRVARACGATIVSRTDEITERDIGTRAGLFEVRKIGDEYFSFIEKCEDPKACTILLRGASKDILNEVERNLQDALHVARNIVLDPFLVPGGGAVEMEVNRFMQEKSKDYKGIIQWPYKSLASSLEIIPQTL 267

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: A0A0K2T4N3_LEPSM (T-complex protein 1 subunit gamma n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2T4N3_LEPSM)

HSP 1 Score: 275 bits (704), Expect = 1.630e-87
Identity = 131/172 (76.16%), Postives = 153/172 (88.95%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            ++II FKPD++ITEKGVSDLAQH+  KAGITA+RRLRK+DNLRVARACGATIVNRTDEITE DIGTG GLFE+RKIGDEYF+F+EKCKDPKACTILLRGASKDILNE+ERNLQDALNVARN+  DP LVPGGGA EMEV+  + +K+K   GV+ WPY ++A+  E+IP+TL
Sbjct:  288 DDIIQFKPDIVITEKGVSDLAQHYLLKAGITALRRLRKTDNLRVARACGATIVNRTDEITEKDIGTGAGLFEVRKIGDEYFSFIEKCKDPKACTILLRGASKDILNEIERNLQDALNVARNIVFDPYLVPGGGAVEMEVSRYMTEKSKDYKGVLQWPYLSLASSFEIIPQTL 459

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI001390016A (T-complex protein 1 subunit gamma-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI001390016A)

HSP 1 Score: 263 bits (672), Expect = 2.080e-87
Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            +E+IA KPDL+ITEKG+SDLAQHF  KA ITAIRR+RK+DN R+ARACGATIVNRT+E+ E DIGTG GLFE+ K GDEYFTF+ +C +PKACTILLRGASKD+LNEVERNLQDA+NVARN+  DP LVPGGGA EM +AH L +KAK + GV  WPYKA+A  LEVIPRTL
Sbjct:    3 DEVIALKPDLVITEKGISDLAQHFLMKANITAIRRVRKTDNNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFGDEYFTFITECNNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGGGACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPRTL 174

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: A0A7R8D2H7_LEPSM (T-complex protein 1 subunit gamma n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8D2H7_LEPSM)

HSP 1 Score: 275 bits (704), Expect = 2.200e-87
Identity = 131/172 (76.16%), Postives = 153/172 (88.95%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            ++II FKPD++ITEKGVSDLAQH+  KAGITA+RRLRK+DNLRVARACGATIVNRTDEITE DIGTG GLFE+RKIGDEYF+F+EKCKDPKACTILLRGASKDILNE+ERNLQDALNVARN+  DP LVPGGGA EMEV+  + +K+K   GV+ WPY ++A+  E+IP+TL
Sbjct:  347 DDIIQFKPDIVITEKGVSDLAQHYLLKAGITALRRLRKTDNLRVARACGATIVNRTDEITEKDIGTGAGLFEVRKIGDEYFSFIEKCKDPKACTILLRGASKDILNEIERNLQDALNVARNIVFDPYLVPGGGAVEMEVSRYMTEKSKDYKGVLQWPYLSLASSFEIIPQTL 518

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI000719C25F (T-complex protein 1 subunit gamma-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C25F)

HSP 1 Score: 272 bits (696), Expect = 1.890e-86
Identity = 134/171 (78.36%), Postives = 151/171 (88.30%), Query Frame = 0

Query:    2 EIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            +IIAFKPDL+ITEKGVSDLAQHF  KAGITA+RRLRKSDN RVARACGA+IV+RT+EI E DIGTG GLFEI KIGDEYFTF+ KCKDPKACTILLRGASKDILNEVERNLQDAL+VARN+  +P LVPGGG+ EM +AH L +KAKS+ GV  WPY+A++  LEVIPRTL
Sbjct:  280 DIIAFKPDLVITEKGVSDLAQHFLVKAGITALRRLRKSDNNRVARACGASIVSRTEEIREEDIGTGAGLFEIEKIGDEYFTFITKCKDPKACTILLRGASKDILNEVERNLQDALHVARNVMVEPKLVPGGGSVEMALAHALNEKAKSITGVHQWPYRAVSRALEVIPRTL 450

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI001B888BC5 (T-complex protein 1 subunit gamma-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888BC5)

HSP 1 Score: 271 bits (692), Expect = 7.700e-86
Identity = 129/171 (75.44%), Postives = 149/171 (87.13%), Query Frame = 0

Query:    2 EIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            E++AFKPDL+ITEKGVSDLAQHFF KAG++ IRR+RKSDN R+ARACGATI NRTDEI E DIGT CGLFEI KIGD+YFTF+ +CKDPKACTILLRGASKDILNEVERNLQDA+NVARN+  +P LVPGGGATEM +A  L +KAKS+ G+  WPY+A++  LEV PRTL
Sbjct:  279 EVLAFKPDLVITEKGVSDLAQHFFVKAGVSVIRRVRKSDNNRIARACGATIANRTDEIREEDIGTSCGLFEIEKIGDDYFTFLVECKDPKACTILLRGASKDILNEVERNLQDAMNVARNVMVNPQLVPGGGATEMALAQALNEKAKSITGIHQWPYRAVSRALEVCPRTL 449

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: A0A7M7RCE8_STRPU (T-complex protein 1 subunit gamma n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7RCE8_STRPU)

HSP 1 Score: 271 bits (692), Expect = 7.900e-86
Identity = 126/171 (73.68%), Postives = 150/171 (87.72%), Query Frame = 0

Query:    2 EIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            EIIA +PDLI TEKG+SDLAQH+  KA ITAIRR+RKSDN R+ARACGAT+VNRTDE+ + D+G GCGLFEI+KIGDEYFTF+ +CK+PKACTILLRGASKD+LNEVERNL DA+N ARN+ Q+PCLVPGGGA EM ++H L +KAK++ GV  WPYKA+A+ LEVIPRTL
Sbjct:  284 EIIALEPDLIFTEKGISDLAQHYLGKANITAIRRVRKSDNNRIARACGATVVNRTDELRKEDLGLGCGLFEIKKIGDEYFTFVTECKNPKACTILLRGASKDVLNEVERNLLDAMNAARNVMQEPCLVPGGGAVEMALSHALNEKAKAIKGVQQWPYKAVASALEVIPRTL 454

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI001E1D9F97 (T-complex protein 1 subunit gamma-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9F97)

HSP 1 Score: 270 bits (689), Expect = 2.650e-85
Identity = 128/171 (74.85%), Postives = 149/171 (87.13%), Query Frame = 0

Query:    2 EIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            E+IA KPDL+ITEKG+SDLAQH+  +AGIT IRR+RKSDN R+ARACGAT+VNRTDE+ E DIGT CGLFE++KIGDEYFTF+ +CK+PKACTILLRGASKDILNEVERNLQDA+NV RN+ QDP LVPGGGA EM +A  L +KAKS+ GV  WPY+A+A  LEVIPRTL
Sbjct:  281 EVIAVKPDLVITEKGISDLAQHYLIRAGITCIRRVRKSDNNRIARACGATVVNRTDELREEDIGTECGLFEVKKIGDEYFTFLTECKNPKACTILLRGASKDILNEVERNLQDAMNVTRNVMQDPYLVPGGGAAEMALAQELNEKAKSITGVHQWPYRAVARALEVIPRTL 451

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BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Match: UPI0013904734 (T-complex protein 1 subunit gamma n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013904734)

HSP 1 Score: 265 bits (677), Expect = 5.090e-85
Identity = 128/172 (74.42%), Postives = 148/172 (86.05%), Query Frame = 0

Query:    1 EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGATIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGASKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSLDGVIAWPYKAIATVLEVIPRTL 172
            +E+IA KPDL+ITEKG+SDLAQHF  KA ITAIRR+RK+DN R+ARACGATIVNRT+E+ E DIGTG GLFE+ K GDEYFTF+ +CK+PKACTILLRGASKD+LNEVERNLQDA+NVARN+  DP LVPGGGA EM +AH L +KAK + GV  WPYKA+A  LEVIPRTL
Sbjct:  232 DEVIALKPDLVITEKGISDLAQHFLMKANITAIRRVRKTDNNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFGDEYFTFITECKNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGGGACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPRTL 403

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig104544.721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI000C77F642	6.080e-99	85.55	T-complex protein 1 subunit gamma-like n=1 Tax=Eur...	[more]
A0A7T8QX80_CALRO	2.760e-89	76.74	T-complex protein 1 subunit gamma n=1 Tax=Caligus ...	[more]
A0A0K2T4N3_LEPSM	1.630e-87	76.16	T-complex protein 1 subunit gamma n=1 Tax=Lepeopht...	[more]
UPI001390016A	2.080e-87	73.84	T-complex protein 1 subunit gamma-like n=1 Tax=Nem...	[more]
A0A7R8D2H7_LEPSM	2.200e-87	76.16	T-complex protein 1 subunit gamma n=1 Tax=Lepeopht...	[more]
UPI000719C25F	1.890e-86	78.36	T-complex protein 1 subunit gamma-like n=1 Tax=Pri...	[more]
UPI001B888BC5	7.700e-86	75.44	T-complex protein 1 subunit gamma-like n=1 Tax=Gig...	[more]
A0A7M7RCE8_STRPU	7.900e-86	73.68	T-complex protein 1 subunit gamma n=2 Tax=Echinace...	[more]
UPI001E1D9F97	2.650e-85	74.85	T-complex protein 1 subunit gamma-like n=1 Tax=Mer...	[more]
UPI0013904734	5.090e-85	74.42	T-complex protein 1 subunit gamma n=1 Tax=Nematost...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	PANTHER	PTHR11353:SF24	T-COMPLEX PROTEIN 1 SUBUNIT GAMMA	coord: 1..173
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 1..173
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 94..116 score: 35.56 coord: 128..140 score: 46.4
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 92..126 e-value: 1.9E-64 score: 220.1
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 127..173 e-value: 1.9E-64 score: 220.1
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 103..173
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 1..173 e-value: 2.4E-56 score: 191.4
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10		coord: 1..91 e-value: 1.9E-64 score: 220.1
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 1..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig104544	contig	Ecto-sp8_S_contig104544:1..519 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig104544.721.1	mRNA_Ecto-sp8_S_contig104544.721.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig104544 1..519 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig104544.721.1 ID=prot_Ecto-sp8_S_contig104544.721.1|Name=mRNA_Ecto-sp8_S_contig104544.721.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=173bp
EEIIAFKPDLIITEKGVSDLAQHFFNKAGITAIRRLRKSDNLRVARACGA
TIVNRTDEITESDIGTGCGLFEIRKIGDEYFTFMEKCKDPKACTILLRGA
SKDILNEVERNLQDALNVARNLYQDPCLVPGGGATEMEVAHLLGQKAKSL
DGVIAWPYKAIATVLEVIPRTLA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027410	TCP-1-like_intermed_sf
IPR027413	GROEL-like_equatorial_sf
IPR002423	Cpn60/TCP-1
IPR027409	GroEL-like_apical_dom_sf