prot_Ecto-sp8_S_contig10411.669.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10411.669.1
Unique Nameprot_Ecto-sp8_S_contig10411.669.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length547
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10411.669.1 vs. uniprot
Match: A0A6H5JZ01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ01_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 2.110e-83
Identity = 205/241 (85.06%), Postives = 209/241 (86.72%), Query Frame = 0 
Query:    1 GVVEDLFGVAGGEGPGAMVPYGQQQPPESHPLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVTASNPFDDLLGGVSTAVGTGSGAGILQQQHTQQPHQQQWPGHPFAGSQQXXXXXXXXXXXXXXSWLGQGGTARNGDATADGGLQLMQPQYPPHQQQLQIPPVQQPFQQQQXQQLQTVAPGNPFFHAAQDLPQRQQK------------APGADLFGDDPFGSVNSGSK 229
            GVVEDLFGV GG GPGAMVPYGQQQP ESHPL+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVTASNPFDDLLGGVSTAVGTGSGAGILQQQ+TQQPHQQQWPGHPFAGS Q    XXXXXXXXX SWLGQGG ARNGDA ADGGLQ MQ QYPPHQQQLQI PVQQPFQQQQ  QLQTVAPGNPFF AAQDLPQ+QQK            APGA+LFGDDPFGSVNSGSK
Sbjct:   76 GVVEDLFGVGGGAGPGAMVPYGQQQPLESHPLH-LHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVTASNPFDDLLGGVSTAVGTGSGAGILQQQYTQQPHQQQWPGHPFAGSLQQYPQXXXXXXXXX-SWLGQGGAARNGDAAADGGLQPMQSQYPPHQQQLQIAPVQQPFQQQQ--QLQTVAPGNPFFDAAQDLPQQQQKGCSAASERRIRQAPGANLFGDDPFGSVNSGSK 312
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BLAST of mRNA_Ecto-sp8_S_contig10411.669.1 vs. uniprot
Match: D7FX00_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX00_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 3.160e-54
Identity = 181/203 (89.16%), Postives = 185/203 (91.13%), Query Frame = 0 
Query:  348 VPRGTAAERGPGSRPLSDADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MMRTASGGSLRGVGGFASRNQRQQQHR-GRDPYDNTYD-DGDXXXXXXXXXXXXXXXXXTGYDSDTMSVMDQDAIRASMRKRGARGTVGAGGGGGRRGDTAEYIVEFE 547
            VPRGTAAERG GSRPLS+ADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      MMRTASGGSLRGVGG+ASRNQRQQQ R GRDPYDNTYD +  XXXXXXXXXXXXXXXXX GYDSDTMSVMDQDAIRASMRKRGARGT GAGG   RRGDT +YIVEFE
Sbjct:   54 VPRGTAAERGRGSRPLSEADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGDSGMMRTASGGSLRGVGGYASRNQRQQQQRRGRDPYDNTYDAEEXXXXXXXXXXXXXXXXXXAGYDSDTMSVMDQDAIRASMRKRGARGTAGAGG---RRGDTVDYIVEFE 253
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BLAST of mRNA_Ecto-sp8_S_contig10411.669.1 vs. uniprot
Match: A0A6H5JUS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS7_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 5.500e-29
Identity = 88/100 (88.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:  442 MMRTASGGSLRGVGGFASRNQRQQQHRGRDPYDNTYDDGDXXXXXXXXXXXXXXXXXTGYDSDTMSVMDQDAIRASMRKRGARGTVGAGGGGGRRGDTAE 541
            MMRTASGGSLRGVGG ASRNQRQQQHRGRDP D+TYDD +XXXXXXXXXXXXXXXXXTG+DSDTMSVMDQDAIRASMRKRGAR T GAGG   RRGDT E
Sbjct:    1 MMRTASGGSLRGVGGNASRNQRQQQHRGRDPCDDTYDD-EXXXXXXXXXXXXXXXXXTGFDSDTMSVMDQDAIRASMRKRGARATAGAGG---RRGDTVE 96
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10411.669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZ01_9PHAE2.110e-8385.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX00_ECTSI3.160e-5489.16PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JUS7_9PHAE5.500e-2988.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10411contigEcto-sp8_S_contig10411:1..6755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10411.669.1mRNA_Ecto-sp8_S_contig10411.669.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10411 1..6755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10411.669.1 ID=prot_Ecto-sp8_S_contig10411.669.1|Name=mRNA_Ecto-sp8_S_contig10411.669.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=547bp
GVVEDLFGVAGGEGPGAMVPYGQQQPPESHPLNQHHHHHAARQQQHPTYQ
GAIVPFQQQQQQQHAGGSGGTSVTASNPFDDLLGGVSTAVGTGSGAGILQ
QQHTQQPHQQQWPGHPFAGSQQQYPQQQHHHHQQQQSWLGQGGTARNGDA
TADGGLQLMQPQYPPHQQQLQIPPVQQPFQQQQQQQLQTVAPGNPFFHAA
QDLPQRQQKAPGADLFGDDPFGSVNSGSKGPPPVPSGGGGGGSSADAVSP
FDFHAVAAAVPAVSAAAATGRRVSGGSAGSSSAGDEGRRGGGGSAQQQQQ
QQDAAPGGRGRATTSSSRKGSRGRAPPSTAGELPARLSRSSRSRSVSVPR
GTAAERGPGSRPLSDADPFGSNSGRHGAPPSQSAQQQGQGGRASRGSTGG
LSRRNSFGAASRRGTGRGALAGWGGGGAGGAGGGDFEGDSGMMRTASGGS
LRGVGGFASRNQRQQQHRGRDPYDNTYDDGDDEERERGNDDDDDDDDDTG
YDSDTMSVMDQDAIRASMRKRGARGTVGAGGGGGRRGDTAEYIVEFE
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