prot_Ecto-sp8_S_contig1035.567.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig1035.567.1
Unique Name	prot_Ecto-sp8_S_contig1035.567.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	710

Homology

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BLAST of mRNA_Ecto-sp8_S_contig1035.567.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 937 bits (2421), Expect = 0.000e+0
Identity = 584/698 (83.67%), Postives = 602/698 (86.25%), Query Frame = 0

Query:   19 MIHPDRIAPDPTEGWRRGSRGALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRLRTGMDAQQQAGLAIKDSPEHKAAVHQQHAGVPHPPSXXXXXIGTIAGLDSSSXXXXXXXXXXXXGLPVSNPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISXXXXXXXSSSCHGGGEAAYSHHTAAASGNNRYTAIPGLNAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAARSAPPLGAAAGEGAPSSTPPSCPVRDLPARAKSMGDTPGGFGEAGGGRGGGG------VQAGFFPEGSMGSTFMRQQDGGGEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAAGPGSAANVGVKREGRPVAAEEDGGIVDVFAEACRAEVWAAAAVGAQFSGASEEECKEYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSK--VLTDLLTKAA--KALEADARDGNRNPEHVLALL 706
            MIHPDR+APDPTEGWRRGSRG LRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKR RTGMDAQQQAGLAIKDSPEHK A+HQQHAGVPHPPS     IGTIAGLDSSS            GLPVSNPKFGGP+TSDSLSGLVELIAPTLSDTGGSGSSASI+       SSSCHGGGEAAYSHH AA SGNNRYTAIPGL+AEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     TPPSCPVRDLPARAKSMGDTPGGFG+AG             VQAGFF EGSM +TFMRQQDGG EGRQHASSALGAPLPQQQ+LPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDA GGDP+Q PDAP AA PGSA +VGVKREGRPVAAEEDGGIVDVFAEACRAE WAAAAVGAQFSGASEEECK+YQSRAM AL+RCLDAPLPEVASVMLL CLFWMHSMETRKV+RYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSK      L   AA   A   +A D   +   +LA++
Sbjct:    1 MIHPDRVAPDPTEGWRRGSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRPRTGMDAQQQAGLAIKDSPEHKPAMHQQHAGVPHPPSPSLPPIGTIAGLDSSSNNMTGGGGD---GLPVSNPKFGGPMTSDSLSGLVELIAPTLSDTGGSGSSASITASINASISSSCHGGGEAAYSHHAAAVSGNNRYTAIPGLHAEGVSPFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPSCPVRDLPARAKSMGDTPGGFGQAGXXXXXXXXXXXXXVQAGFFSEGSMENTFMRQQDGGSEGRQHASSALGAPLPQQQRLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDASGGDPKQSPDAPIAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMRALARCLDAPLPEVASVMLLFCLFWMHSMETRKVSRYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKNNEYPTLPAHAAYTHAARGEAEDAEASGRLMLAII 695

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BLAST of mRNA_Ecto-sp8_S_contig1035.567.1 vs. uniprot
Match: D8LQH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH3_ECTSI)

HSP 1 Score: 664 bits (1713), Expect = 3.140e-228
Identity = 349/366 (95.36%), Postives = 352/366 (96.17%), Query Frame = 0

Query:  346 MGDTPGGFGEAGGGRGGGG-VQAGFFPEGSMGSTFMRQQDGGGEGRQHASSALGAPLPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFGDAGGGDPEQLPDAPTAAGPGSAANVGVKREGRPVAAEEDGGIVDVFAEACRAEVWAAAAVGAQFSGASEEECKEYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLR 710
            MGDTPGGFGEAG        VQAGFFP+GSMGSTFMRQQDGG EGRQHASSALGAPLPQQQQLPPR SLPMTLDGRSKTHLKTFMRTVGSLILLPGA AIRSAVFGDAGGGDPEQLPDAPTAA PGSA +VGVKREGRPVAAEEDGGIVDVFAEACRAE WAAAAVGAQFSGASEEECK+YQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLR
Sbjct:    1 MGDTPGGFGEAGXXXXXXXXVQAGFFPKGSMGSTFMRQQDGGSEGRQHASSALGAPLPQQQQLPPRRSLPMTLDGRSKTHLKTFMRTVGSLILLPGAGAIRSAVFGDAGGGDPEQLPDAPTAADPGSAEDVGVKREGRPVAAEEDGGIVDVFAEACRAEAWAAAAVGAQFSGASEEECKDYQSRAMGALSRCLDAPLPEVASVMLLLCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMTLNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEMLHDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPEHVLALLHGLR 366

[Close]

BLAST of mRNA_Ecto-sp8_S_contig1035.567.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.930e-5
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0

Query:   39 GALRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKA 83
            G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++
Sbjct:   46 GFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRS 90

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig1035.567.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig1035.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K1B7_9PHAE	0.000e+0	83.67	Zn(2)-C6 fungal-type domain-containing protein (Fr...	[more]
D8LQH3_ECTSI	3.140e-228	95.36	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KIX7_9PHAE	3.930e-5	51.11	Zn(2)-C6 fungal-type domain-containing protein n=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 38..96 e-value: 1.1E-5 score: 27.3
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 37..78
None	No IPR available	PANTHER	PTHR47663	FAMILY NOT NAMED	coord: 23..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..538
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 557..710
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 539..556
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 44..71
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 44..73 score: 9.424

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig1035	contig	Ecto-sp8_S_contig1035:10..5823 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig1035.567.1	mRNA_Ecto-sp8_S_contig1035.567.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig1035 10..5839 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig1035.567.1 ID=prot_Ecto-sp8_S_contig1035.567.1|Name=mRNA_Ecto-sp8_S_contig1035.567.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=710bp
MAEDSNNSDSSTATKTSAMIHPDRIAPDPTEGWRRGSRGALRKSCDTCTS
SKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKARAEDEKRLRTGMDAQQQ
AGLAIKDSPEHKAAVHQQHAGVPHPPSPPLPPIGTIAGLDSSSNNMTGGG
GGGGGGLPVSNPKFGGPITSDSLSGLVELIAPTLSDTGGSGSSASISASI
NASISSSCHGGGEAAYSHHTAAASGNNRYTAIPGLNAEGVSPFLGGGGTS
PPHHNQHGASRGGASNRPGFPPSSSVAAVATLSSLSAAIDHTSRQQPGGG
GGGGARDSLVAARSAPPLGAAAGEGAPSSTPPSCPVRDLPARAKSMGDTP
GGFGEAGGGRGGGGVQAGFFPEGSMGSTFMRQQDGGGEGRQHASSALGAP
LPQQQQLPPRGSLPMTLDGRSKTHLKTFMRTVGSLILLPGADAIRSAVFG
DAGGGDPEQLPDAPTAAGPGSAANVGVKREGRPVAAEEDGGIVDVFAEAC
RAEVWAAAAVGAQFSGASEEECKEYQSRAMGALSRCLDAPLPEVASVMLL
LCLFWMHSMETRKVARYFGFAQQVGLELGSLMPEELRHTIAFVACLVTMT
LNLDQVGSFSLQVKDQAVWGVSLRDNSCRPGVDPFVLALTALTVACNEML
HDGAGRGGQGAIGAGGLSPRVAPSKVLTDLLTKAAKALEADARDGNRNPE
HVLALLHGLR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036864	Zn2-C6_fun-type_DNA-bd_sf
IPR001138	Zn2-C6_fun-type_DNA-bd