prot_Ecto-sp8_S_contig10301.497.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10301.497.1
Unique Nameprot_Ecto-sp8_S_contig10301.497.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length569
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10301.497.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI)

HSP 1 Score: 759 bits (1960), Expect = 7.690e-271
Identity = 393/449 (87.53%), Postives = 406/449 (90.42%), Query Frame = 0 
Query:  121 MSQEDKKVILLQLADWNPVRKVKVIKAWEATDPAMTAGFLLELIQEEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDESPWETGGAAGGAGAAKGTKPQGGAQKTRYLEERAGTASGAGDLASLPAKERLDRSGQQEQQLQFVVTYAGVGFDPRRVCAGCTEELRAAIIWSGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRAKAAQNLQAAEVRRMLDLKLSHAAAVSSGACKDEGLKRLNQREATAWAAKLRLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESYAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSYLCERWVGVAS 569
            MSQ+DKK++LLQLADWNPVRKVKV+KAWEATDPAMTAGFLLELI+EEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDESPWETGG AGGAGAA+GTKP GGAQKTRY+E+RAGTASGAGDLAS PAKE LDRS                                 AII SGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRA AAQNLQ  +VRRMLDLKLSH+AAV+SGACKDEGLKRLN+REATAWAAKL+LKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNES AIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFS LCERWVGVAS
Sbjct:    1 MSQQDKKILLLQLADWNPVRKVKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDESPWETGGTAGGAGAAEGTKPLGGAQKTRYVEDRAGTASGAGDLASSPAKECLDRS---------------------------------AIISSGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVAS 416
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10301.497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT37_ECTSI7.690e-27187.53C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10301contigEcto-sp8_S_contig10301:108..6899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10301.497.1mRNA_Ecto-sp8_S_contig10301.497.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10301 108..6899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10301.497.1 ID=prot_Ecto-sp8_S_contig10301.497.1|Name=mRNA_Ecto-sp8_S_contig10301.497.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=569bp
KELLVGLGEEDKREMTSFMGLVNAQTRKTLQGVVQTISKSGQDPRMLKKK
ALVHALARLDIDRSIFFLETMLSLGQDAMLQLLWLYERYNVANAGGGMTK
CAMDHFGRDMGVNRVDELFDMSQEDKKVILLQLADWNPVRKVKVIKAWEA
TDPAMTAGFLLELIQEEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEH
RRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDES
PWETGGAAGGAGAAKGTKPQGGAQKTRYLEERAGTASGAGDLASLPAKER
LDRSGQQEQQLQFVVTYAGVGFDPRRVCAGCTEELRAAIIWSGHDLELWH
TVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSR
HSLEDRAKAAQNLQAAEVRRMLDLKLSHAAAVSSGACKDEGLKRLNQREA
TAWAAKLRLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTP
ATPQGAMQTFGRACPPEDNESYAIRLWKRGAKETEEVLDLRRDVREWQSS
CGRRARFSYLCERWVGVAS
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