prot_Ecto-sp8_S_contig102960.487.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102960.487.1
Unique Nameprot_Ecto-sp8_S_contig102960.487.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: D8LM44_ECTSI (Similar to jouberin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM44_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.080e-20
Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRVK 47
            VNPGFAGGATA+SLIRASFSPDGRFVVSGSETGRVRVWE+QEGKRVK
Sbjct:  612 VNPGFAGGATAKSLIRASFSPDGRFVVSGSETGRVRVWESQEGKRVK 658          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A7S2BSZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSZ3_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.560e-6
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    5 FAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            F G  T  S+I A FSPDGRFVV+GSE G   VW+A  G R+
Sbjct:  809 FHGSNTRSSMISAVFSPDGRFVVAGSEDGHAHVWDAVSGDRI 850          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A087SIB0_AUXPR (Denticleless protein-like protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIB0_AUXPR)

HSP 1 Score: 49.3 bits (116), Expect = 1.670e-5
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    5 FAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGK 44
            +AG A A   ++A FSPDGRF+ SGS   RV VWE  EG+
Sbjct:  223 YAGHAAASFYVKAGFSPDGRFLASGSSDRRVHVWEGHEGE 262          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A1V9Z811_9STRA (Jouberin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z811_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.290e-5
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            +N G+ G     SLI++SFSPDGR+VVSGSE G V ++ +  G+R+
Sbjct:  554 LNKGYTGIKCTTSLIKSSFSPDGRYVVSGSEDGAVFMFSSLNGQRI 599          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A7S1X3E5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X3E5_9CHLO)

HSP 1 Score: 47.8 bits (112), Expect = 5.870e-5
Identity = 20/41 (48.78%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQ 41
            +N  +AG     + I+++FSPDGRF++SGSE GRV VW+ +
Sbjct:  297 INSQYAGVKCINAPIQSTFSPDGRFIISGSEDGRVYVWDVE 337          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A067CJS3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJS3_SAPPC)

HSP 1 Score: 47.8 bits (112), Expect = 5.880e-5
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            +N G++G     ++++++FSPDGRFV SGSE G V ++ +  G+R+
Sbjct:  546 LNKGYSGLTVTSAMVKSAFSPDGRFVASGSEDGAVYLYSSLNGRRI 591          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A7S2SPM8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPM8_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 8.040e-5
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQ 41
            ++ GF G   ++SLIRA FSPDG +V+SG E G+  VW  +
Sbjct:  325 MHQGFIGAPVSQSLIRACFSPDGEYVMSGGEDGKPHVWHTK 365          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A0G4IPK7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IPK7_PLABS)

HSP 1 Score: 47.4 bits (111), Expect = 8.040e-5
Identity = 22/34 (64.71%), Postives = 24/34 (70.59%), Query Frame = 0
Query:   13 SLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            S IRA FSPDG FVVSGSE G+V VW    G+ V
Sbjct:  502 SAIRAQFSPDGAFVVSGSEDGKVHVWRVASGELV 535          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A1V9YPZ2_9STRA (Jouberin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPZ2_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 8.050e-5
Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            +N G+ G   + +L+R++FSPDGRFV SGSE G   ++ +  G+R+
Sbjct:  556 LNKGYCGMTISSTLVRSTFSPDGRFVASGSEDGAAYLFSSLNGQRI 601          
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Match: A0A3P3YLQ6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YLQ6_PLABS)

HSP 1 Score: 47.4 bits (111), Expect = 8.050e-5
Identity = 22/34 (64.71%), Postives = 24/34 (70.59%), Query Frame = 0
Query:   13 SLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRV 46
            S IRA FSPDG FVVSGSE G+V VW    G+ V
Sbjct:  674 SAIRAQFSPDGAFVVSGSEDGKVHVWRVASGELV 707          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102960.487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LM44_ECTSI1.080e-2095.74Similar to jouberin isoform 1 n=1 Tax=Ectocarpus s... [more]
A0A7S2BSZ3_9STRA2.560e-657.14Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A087SIB0_AUXPR1.670e-555.00Denticleless protein-like protein n=1 Tax=Auxenoch... [more]
A0A1V9Z811_9STRA2.290e-550.00Jouberin n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
A0A7S1X3E5_9CHLO5.870e-548.78Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A067CJS3_SAPPC5.880e-541.30Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A7S2SPM8_9STRA8.040e-548.78Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0G4IPK7_PLABS8.040e-564.71Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A1V9YPZ2_9STRA8.050e-543.48Jouberin n=1 Tax=Achlya hypogyna TaxID=1202772 Rep... [more]
A0A3P3YLQ6_PLABS8.050e-564.71Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..47
e-value: 1.9E-8
score: 35.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 18..47
score: 11.611
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 7..47
score: 10.627
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 15..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102960contigEcto-sp8_S_contig102960:71..211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102960.487.1mRNA_Ecto-sp8_S_contig102960.487.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102960 71..211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102960.487.1 ID=prot_Ecto-sp8_S_contig102960.487.1|Name=mRNA_Ecto-sp8_S_contig102960.487.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=47bp
VNPGFAGGATAESLIRASFSPDGRFVVSGSETGRVRVWEAQEGKRVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam