prot_Ecto-sp8_S_contig10286.476.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10286.476.1
Unique Nameprot_Ecto-sp8_S_contig10286.476.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length104
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10286.476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..43
NoneNo IPR availableTMHMMTMhelixcoord: 46..63
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10286contigEcto-sp8_S_contig10286:200..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10286.476.1mRNA_Ecto-sp8_S_contig10286.476.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10286 161..686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10286.476.1 ID=prot_Ecto-sp8_S_contig10286.476.1|Name=mRNA_Ecto-sp8_S_contig10286.476.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=104bp
MHDANERVFASFWCIHLFLCVCVQLCTYPVLFGRVLCLCETECYPSWMLF
FCSSVLVLWCLCETDACVWWKCRCDAASGNVLPKFGSSPSIVSSYSLACQ
GVP*
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