prot_Ecto-sp8_S_contig10283.471.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10283.471.1
Unique Nameprot_Ecto-sp8_S_contig10283.471.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length976
Homology
BLAST of mRNA_Ecto-sp8_S_contig10283.471.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 1004 bits (2596), Expect = 0.000e+0
Identity = 613/672 (91.22%), Postives = 621/672 (92.41%), Query Frame = 0
Query:  296 PVSETXXVAPTPVIPTLVPVAXXPEPPAASNSLQPVVAPPTASVTVTNAPVDAAQPVAPGTIQXXAPGTTVSPATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTVTTTTSPAAVPGAPTAEPALAXXXXXXXXXXAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLAGTRAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVGVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLDETSDAGFVVTVPGTTTSGLIQSINYFQNNFDHVSEALGVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRTKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAS 967
            PVSETXX      IPTL+PVA  PEPPAAS+SLQPVVAPPTAS  +TNAPVDAAQPVAPGT  XX       PATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQ+PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXX  T TTSPAAVPGAPTAEPALA XXXXXXXXXAAPAARDLPIAGIPTP PIAGGTARPAAPIVAPVVPGAPTLA TRAPVDPADIPKTPAPVLP     X  XX     XXXXXXXXXXXXXXXXXXXXXX PSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEV  TRRSLGGWLTE WNSTSVSPTEG YYLRRRLDETSDAGFVVTVPG TTSGLIQSINYFQNN+  VSEALGVDSEDVQFSSLQFSATS SPITEEASNSDVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QR R KEASR+DFFSSK+MGS AGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA+
Sbjct: 1107 PVSETXXXXXXXXIPTLLPVATPPEPPAASDSLQPVVAPPTASGALTNAPVDAAQPVAPGTTXXXXXXXXXXPATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQEPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPXXXXXXXXXAAPAARDLPIAGIPTPVPIAGGTARPAAPIVAPVVPGAPTLASTRAPVDPADIPKTPAPVLPPDQLPXTSXXATQPTXXXXXXXXXXXXXXXXXXXXXXXPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEFTRRSLGGWLTEEWNSTSVSPTEGFYYLRRRLDETSDAGFVVTVPGPTTSGLIQSINYFQNNYGRVSEALGVDSEDVQFSSLQFSATSISPITEEASNSDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAT 1777          
BLAST of mRNA_Ecto-sp8_S_contig10283.471.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 931 bits (2407), Expect = 1.530e-316
Identity = 579/639 (90.61%), Postives = 590/639 (92.33%), Query Frame = 0
Query:  330 PVVAPPTASVTVTNAPVDAAQPVAPGTIQXXAPGTTVSPATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTVTTTTSPAAVPGAPTAEPALAXXXXXXXXXXAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLAGTRAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVGVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLDETSDAGFVVTVPGTTTSGLIQSINYFQNNFDHVSEALGVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRTKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASS 968
            PVVAP TAS  VTNAPVDAAQPVAPGTI  X    TV  ATAPTAL                    SA IGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXT T T SPAAVPGAPTAEPALA XXXXXXXX AAPAARDLPI GIPTPAPIAGGTARPAAPIVAPVVPGAPTL+GT APVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   APSTNAPSVSG LTM+ AA+EQCEDGCEVGLANAFDVQPYLVRCSCPEV ++RRSLGGWLTEGWNST+VSPTEGSYYLRRRL+ETSDAGFVVTVPGTTTSGLIQSINYFQNNFD VSEALGVDSE+VQFSSLQFSATSFSPITEEASN+DVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QRMR KEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA++
Sbjct:  646 PVVAP-TASAAVTNAPVDAAQPVAPGTIPPXXXXXTVPXATAPTALXXXXXXXXXXXXXXXXXXXXSAAIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTTTITNSPAAVPGAPTAEPALAPXXXXXXXXTAAPAARDLPITGIPTPAPIAGGTARPAAPIVAPVVPGAPTLSGTTAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPSTNAPSVSGALTMSLAAMEQCEDGCEVGLANAFDVQPYLVRCSCPEVEISRRSLGGWLTEGWNSTTVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALGVDSENVQFSSLQFSATSFSPITEEASNNDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAAT 1282          
BLAST of mRNA_Ecto-sp8_S_contig10283.471.1 vs. uniprot
Match: D7G150_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G150_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 7.010e-51
Identity = 151/337 (44.81%), Postives = 183/337 (54.30%), Query Frame = 0
Query:  496 VAPVVPGAP---------TLAGTRAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVGVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLDETSDAGFVVTVPGTTTSGLIQSINYFQNNFDHVSEALGVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRTKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASI 823
            +APVVPG           T      PVDP D  KTPAPVLP                    XXXXXXXXXX         S  APSVSG + ++E A+ QCE GC  GLA AFD+QPY V+C CPEV   RRSL   L    N TSV P+EG+Y  RRRL  T++  +VVTVPG TT G++QSIN+FQ N+  VS +LGV  ++V FS+L+F A S S I    SN DV L+VNPP S AS  A+GMF++ ++ALLLGTC CL A+L FC                                       G+Y   +  IR  GMLAPH +AI PAS+
Sbjct:  199 MAPVVPGXXXXXXXXXXXTARPANTPVDPVDTFKTPAPVLPPVLVPTRTPITPVTTAAPLPXXXXXXXXXX---------SAQAPSVSGFIIVSETALAQCEVGCVEGLAAAFDLQPYRVQCICPEV--RRRSLRSMLANRRNVTSVHPSEGAYLSRRRLT-TAEVPYVVTVPGITTQGMVQSINHFQANYMEVSSSLGVPGDEVVFSTLEFVAASSSHI----SNMDVPLLVNPPASGASTNAIGMFIICILALLLGTCVCLEAVLNFC---------------------------------------GKYCSTYL-IRARGMLAPHHRAIVPASM 479          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10283.471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYK9_9PHAE0.000e+091.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG77_ECTSI1.530e-31690.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G150_ECTSI7.010e-5144.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 730..755
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 756..975
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..729
NoneNo IPR availableTMHMMTMhelixcoord: 734..756

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10283contigEcto-sp8_S_contig10283:872..6665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10283.471.1mRNA_Ecto-sp8_S_contig10283.471.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10283 872..6665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10283.471.1 ID=prot_Ecto-sp8_S_contig10283.471.1|Name=mRNA_Ecto-sp8_S_contig10283.471.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=976bp
VSLQPVSAPAAPTIPTQGPVEQPPTSLEPTATTQPVAAPVEPPSTATTQP
VAAPTPTVTAPPATGTSPPATAPVTAPTPTVTAPPATATTQPVTAPTPTA
TAPPATGTSPPATAPVTAPAPTVTAPPGTATTQPVTAPTPTATAPPGTVT
TQPVTAPVTAPAPTVTAPPGTVTTQPVTAPTPTATAPPGTATTQPVTAPT
PTVTTPPATGTTQPVAAPDTAPTPTVTTPPATGTEPPAVAPTPVTAPTAR
GTSPPASTPVTAPPATETTPPATAPTQPVTAPPVTGTSPPASAPTPVSET
PAVAPTPVIPTLVPVATPPEPPAASNSLQPVVAPPTASVTVTNAPVDAAQ
PVAPGTIQPVAPGTTVSPATAPTALAPSAEPVIGVQPSVPPVAAPSATIG
QDPTVDPIAVVPSPPPAAVVPSPPPAPVVGAPPTVTTTTSPAAVPGAPTA
EPALAPVVPLPPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVV
PGAPTLAGTRAPVDPADIPKTPAPVLPPDQLPPTPAPATQPTPAPLAPGS
TRAPVPTPVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFD
VQPYLVRCSCPEVGVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLDETS
DAGFVVTVPGTTTSGLIQSINYFQNNFDHVSEALGVDSEDVQFSSLQFSA
TSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLW
AILGFCRRQRMRTKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYH
NFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRG
DPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDS
IDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVV
YTEAEEEAEFWQGLQASSAAFFFAI*
back to top