prot_Ecto-sp8_S_contig102640.441.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig102640.441.1
Unique Name	prot_Ecto-sp8_S_contig102640.441.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	141

Homology

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: A0A0U2TGG4_ACAPC (60S ribosomal protein L23 n=12 Tax=Neocopepoda TaxID=116569 RepID=A0A0U2TGG4_ACAPC)

HSP 1 Score: 256 bits (653), Expect = 7.250e-86
Identity = 130/140 (92.86%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGGA GAKFRISLA PVGAVMNCADNTG KNL+++AV GIRGRLNRLPAAC GDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDG FIYFEDNAGVIVNNKGEMKG AITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGAVGAKFRISLALPVGAVMNCADNTGAKNLFIMAVGGIRGRLNRLPAACVGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGTFIYFEDNAGVIVNNKGEMKGFAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: A0A1D2M991_ORCCI (60S ribosomal protein L23 n=2 Tax=Hexapoda TaxID=6960 RepID=A0A1D2M991_ORCCI)

HSP 1 Score: 254 bits (650), Expect = 2.080e-85
Identity = 130/140 (92.86%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG AGAKFRISL  PVGAVMNCADNTGGKNL+VIAV GIRGRLNRLPAA SGDM +ATVKKGKPELRKKVMPAVVIRQRK FRRKDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGTAGAKFRISLGLPVGAVMNCADNTGGKNLFVIAVQGIRGRLNRLPAAASGDMFVATVKKGKPELRKKVMPAVVIRQRKAFRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: A0A6P8NHK6_9HYME (60S ribosomal protein L23 n=52 Tax=Pterygota TaxID=7496 RepID=A0A6P8NHK6_9HYME)

HSP 1 Score: 251 bits (641), Expect = 4.900e-84
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG+AGAKFRISL  PVGAV+NCADNTG KNLYVIAV GI+GRLNRLPAA SGDM++ATVKKGKPELRKKVMPAV+IRQRK FRRKDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVIIRQRKPFRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: A0A026X364_OOCBI (60S ribosomal protein L23 n=17 Tax=Pterygota TaxID=7496 RepID=A0A026X364_OOCBI)

HSP 1 Score: 251 bits (640), Expect = 6.960e-84
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG+AGAKFRISL  PVGAV+NCADNTG KNLYVIAV GI+GRLNRLPAA SGDM++ TVKKGKPELRKKVMPAVVIRQRK FRRKDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVTTVKKGKPELRKKVMPAVVIRQRKPFRRKDGSFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: Q5UAR6_BOMMO (60S ribosomal protein L23 n=25 Tax=Protostomia TaxID=33317 RepID=Q5UAR6_BOMMO)

HSP 1 Score: 250 bits (639), Expect = 9.880e-84
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG+AGAKFRISL  PVGAV+NCADNTG KNLYVIAV GI+GRLNRLPAA SGDM++ATVKKGKPELRKKVMPAVVIRQRK FRR+DG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: C4WRU2_ACYPI (60S ribosomal protein L23 n=3 Tax=Arthropoda TaxID=6656 RepID=C4WRU2_ACYPI)

HSP 1 Score: 250 bits (639), Expect = 9.880e-84
Identity = 126/140 (90.00%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG+AGAKFRISL  PVGAV+NCADNTG KNL+VIAV GI+GRLNRLPAA SGDM++ATVKKGKPELRKKVMPAVVIRQRK FRRKDG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLFVIAVQGIKGRLNRLPAAASGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: V5I9Q0_ANOGL (60S ribosomal protein L23 (Fragment) n=5 Tax=cellular organisms TaxID=131567 RepID=V5I9Q0_ANOGL)

HSP 1 Score: 250 bits (639), Expect = 1.210e-83
Identity = 128/139 (92.09%), Postives = 132/139 (94.96%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSI 139
            MSKRGRGG+AGAKFRISLA PVGAV+NCADNTG KNLYVIAV GI GRLNRLPAA SGDM++ATVKKGKPELRKKVMPAVVIRQRK FRRKDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSI
Sbjct:    7 MSKRGRGGSAGAKFRISLALPVGAVINCADNTGAKNLYVIAVQGIGGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSI 145

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: E0VVN2_PEDHC (60S ribosomal protein L23 n=17 Tax=Protostomia TaxID=33317 RepID=E0VVN2_PEDHC)

HSP 1 Score: 250 bits (638), Expect = 1.400e-83
Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG+AGAKFRISL  PVGAV+NCADNTG KNLYVIAV GI+GRLNRLPAA SGDM +ATVKKGKPELRKKVMPAVVIRQRK FRRKDG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: A0A6P8Z0I4_THRPL (60S ribosomal protein L23 n=3 Tax=Mandibulata TaxID=197563 RepID=A0A6P8Z0I4_THRPL)

HSP 1 Score: 249 bits (637), Expect = 1.990e-83
Identity = 126/140 (90.00%), Postives = 133/140 (95.00%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG++GAKFRISL  PVGAV+NCADNTG KNLYVIAV+GI GRLNRLPAA SGDM++ATVKKGKPELRKKVMPAVVIRQRK FRRKDG F+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIGGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRKDGTFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

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BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Match: RL23_DROME (60S ribosomal protein L23 n=76 Tax=Arthropoda TaxID=6656 RepID=RL23_DROME)

HSP 1 Score: 248 bits (634), Expect = 5.720e-83
Identity = 127/140 (90.71%), Postives = 130/140 (92.86%), Query Frame = 0

Query:    1 MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLNRLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140
            MSKRGRGG AG KFRISL  PVGAVMNCADNTG KNLYVIAV+GIRGRLNRLPAA  GDM +ATVKKGKPELRKKVMPAVVIRQRK FRR+DG FIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA
Sbjct:    1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA 140

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig102640.441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0U2TGG4_ACAPC	7.250e-86	92.86	60S ribosomal protein L23 n=12 Tax=Neocopepoda Tax...	[more]
A0A1D2M991_ORCCI	2.080e-85	92.86	60S ribosomal protein L23 n=2 Tax=Hexapoda TaxID=6...	[more]
A0A6P8NHK6_9HYME	4.900e-84	90.71	60S ribosomal protein L23 n=52 Tax=Pterygota TaxID...	[more]
A0A026X364_OOCBI	6.960e-84	90.71	60S ribosomal protein L23 n=17 Tax=Pterygota TaxID...	[more]
Q5UAR6_BOMMO	9.880e-84	90.71	60S ribosomal protein L23 n=25 Tax=Protostomia Tax...	[more]
C4WRU2_ACYPI	9.880e-84	90.00	60S ribosomal protein L23 n=3 Tax=Arthropoda TaxID...	[more]
V5I9Q0_ANOGL	1.210e-83	92.09	60S ribosomal protein L23 (Fragment) n=5 Tax=cellu...	[more]
E0VVN2_PEDHC	1.400e-83	91.43	60S ribosomal protein L23 n=17 Tax=Protostomia Tax...	[more]
A0A6P8Z0I4_THRPL	1.990e-83	90.00	60S ribosomal protein L23 n=3 Tax=Mandibulata TaxI...	[more]
RL23_DROME	5.720e-83	90.71	60S ribosomal protein L23 n=76 Tax=Arthropoda TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 19..140 e-value: 3.1E-58 score: 209.5
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 23..139 e-value: 3.3E-35 score: 120.8
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 2..140
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 19..140 score: 18.2
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20		coord: 2..140 e-value: 4.8E-68 score: 229.0
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 11..139
None	No IPR available	PANTHER	PTHR11761:SF22	60S RIBOSOMAL PROTEIN L23	coord: 2..140
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 79..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig102640	contig	Ecto-sp8_S_contig102640:49..471 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig102640.441.1	mRNA_Ecto-sp8_S_contig102640.441.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig102640 46..471 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig102640.441.1 ID=prot_Ecto-sp8_S_contig102640.441.1|Name=mRNA_Ecto-sp8_S_contig102640.441.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=141bp
MSKRGRGGAAGAKFRISLACPVGAVMNCADNTGGKNLYVIAVYGIRGRLN
RLPAACSGDMVLATVKKGKPELRKKVMPAVVIRQRKTFRRKDGQFIYFED
NAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000218	Ribosomal_L14P
IPR036853	Ribosomal_L14_sf
IPR019972	Ribosomal_L14P_CS