prot_Ecto-sp8_S_contig10218.358.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10218.358.1
Unique Nameprot_Ecto-sp8_S_contig10218.358.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length267
Homology
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: D7G0H0_ECTSI (F-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H0_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.690e-181
Identity = 259/266 (97.37%), Postives = 262/266 (98.50%), Query Frame = 0
Query:    1 MQGRGRGIDRAGWAFDDGNNHDAPNAWSEEKGGQENDPFVGQRPDDGKGGAGGEQREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGPWIVTCSGDYVIRLWDSRTGLCVRELGTKSGAAITSFRLSGLCLLTTSLFDTSVLMTSFSQGRGGDGKGSA 266
            MQGRGRGIDRAGWAFDDGNNH APNAWSEEKGG+ENDPFVGQRPDDGKGGAGGEQREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRL+MVGPWIVTCSGDYVIRLWDSRTGLCVREL TKSGAAITSFRLSGLCLLTTSLFDTSVLMTSFSQ RG +GKGSA
Sbjct:  461 MQGRGRGIDRAGWAFDDGNNHGAPNAWSEEKGGEENDPFVGQRPDDGKGGAGGEQREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLDMVGPWIVTCSGDYVIRLWDSRTGLCVRELETKSGAAITSFRLSGLCLLTTSLFDTSVLMTSFSQRRGSEGKGSA 726          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A835YXW5_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.250e-18
Identity = 78/261 (29.89%), Postives = 116/261 (44.44%), Query Frame = 0
Query:   51 AGGEQREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESY-----------------GPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRK----GQRPRLARA-----RFCEHQRPIRRL-------EMVGPWIVTCSGDY--------------------VIRLWDSRTGLCVRELGTKSGAAITSFRLSGLCLLTTSLFDTSVLMTSFSQGR 258
            AG +   + L   S    A+A  A  G+ + +YAGH++ V+CLQA+ +                    G +LV+G  D  V VW+ ++G CL+ L           G    V C+Q    T+VVG DR ++ W L       ++  L+ A     ++C       +L         VG   +  + D+                    ++R+WD R+G CVRE+  +SGAAI SFRLSG  L + SLF+ SVL T F   R
Sbjct:  134 AGCDDGVIRLIIISPRCIAQALGAMDGQLLQVYAGHSKAVSCLQASHSGGXXXXXXXXXXXXXAEPGAGTLLVSGSCDGTVRVWDCSSGTCLDVLRQEPCEEYMHDGLSQSVRCMQVCGSTVVVGADRSIAQWRLGSYGSAAEKAGLSAAAVCLRKYCSFMHGRAQLCVWQLGSASVGNGALAPTHDWFRSRAHSCAPARVRRAHRALLVRVWDVRSGRCVREVVGRSGAAILSFRLSGTTLFSCSLFEQSVLATHFCPER 394          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A072VPK7_MEDTR (Putative transcription factor WD40-like family n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VPK7_MEDTR)

HSP 1 Score: 71.2 bits (173), Expect = 1.750e-10
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 0
Query:   60 LFTASDDGTAKAWDARSGRFVCLYAGH---TRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGP-WIVTCSGDYVIRLWDSRTGLCVR 219
            + T SDD T + W+ +SG  + +  GH   T G+TCL    T +   + +TG  D +V +  +TTGR +  L + +  +         VG   +     + G D+ +++W +       LAR+  CEH+  +     +G  ++ T S D  +RLWDSR+G CVR
Sbjct:  221 ICTGSDDATLRIWNPKSGESIHVVRGHPYHTEGITCLAINSTST---IALTGSVDGSVHIVNITTGRVVSTLPSHSSSI-------ECVGFAPSGSWAAIGGMDK-MTIWDVEHS----LARS-ICEHEYGVTCSTWLGTSYVATGSNDGAVRLWDSRSGECVR 368          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A8E2J4G8_9APHY (WD40 repeat-like protein n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2J4G8_9APHY)

HSP 1 Score: 60.1 bits (144), Expect = 1.240e-6
Identity = 53/174 (30.46%), Postives = 76/174 (43.68%), Query Frame = 0
Query:   63 ASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKL------------ETGAGLVINPGGPGPRVGCLQAYRDTIVVGE-DRHVSVW------SLRKGQRPRLA---RARFCEHQRPIRRLEMVGPWIVTCSGDYVIRLWDSRT 214
            A DD  +KAW+ R  R     +GH+  V CL+   +      ++TG  D  + VW L TG+CL               +    L    GG    V   +  R  +V G  D  + VW      S  +G+ P +A   RA    H   +  L + G WIV+CS D +IR+WD +T
Sbjct:  289 ALDDKESKAWEPRVRRI----SGHSDSVYCLEFDSSR-----IITGSRDRTIKVWSLKTGKCLATFAXXXXXXXXXXXDKDWDLQDQDGGDN-NVDVARKRRGFLVSGSSDCTICVWDMYTGSSTDEGEEPEVAADVRAVLRGHTGGVLDLRIDGKWIVSCSKDALIRVWDRKT 452          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A6A4VLT3_AMPAM (WD repeat-containing protein 86 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VLT3_AMPAM)

HSP 1 Score: 59.3 bits (142), Expect = 1.840e-6
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   55 QREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWE 118
            +R+VLLFT S DG A+A+DA+SG+   +Y+GH RG+TC+     + Y     TG  D  + VW+
Sbjct:  321 RRQVLLFTCSSDGDARAYDAKSGKQKRVYSGHQRGITCMCVVDKKLY-----TGADDGQLRVWD 379          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A485L6R2_9STRA (Aste57867_16942 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6R2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.550e-6
Identity = 55/195 (28.21%), Postives = 80/195 (41.03%), Query Frame = 0
Query:   59 LLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGPWIVTCSGDYVIRLWDSRTGLCVRELGTKSGAAITS--FRLSGLCLLTTSLFDTSVLM 251
            + FTAS DGT +AWD+ S +    Y G       +   ++E  G +++  G D    VW + TGR    L    G V            L    + +  G DR + VW +  G+  +    R   +   +     VG  I +   D  +R WD+RT   V EL       ITS  F   G  +LT S  +T  L+
Sbjct:  198 VAFTASSDGTVRAWDSYSCQAKADYRGLGMSQPLICVRVSED-GELVLGTGCDRICQVWRVGTGRIAHTLLGHKGKVY------AAEFMLDPSNEVLTGGADRSIRVWDVTSGRNLKTFSCRSTCNDLAV----AVGGQIASAHQDGAVRFWDARTKNPVHELNDLHADQITSVSFTRDGTKVLTNSRDNTLQLL 381          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A4P9XZX6_9FUNG (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9XZX6_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 4.970e-6
Identity = 39/169 (23.08%), Postives = 75/169 (44.38%), Query Frame = 0
Query:   60 LFTASDDGTAKAWDARSGRFVCLYAG------HTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMV--GPWIVTCSGDYVIRLWDSRTGLCVRE 220
            + + S+D +   WD R+G  +C  +G      H   +TC+  +  ++   + +TG  D    +    TG  L+  E     V +       VG  +      +   D  +S+W +       +   +  +H+  + ++  +   P +++CS D  +RLWD+RTG CVR+
Sbjct:  142 IVSVSEDSSFGVWDPRTGGSLCRVSGQEDARFHPESITCIALSQDDT---LALTGSTDGTARLVRTETGSILQSFEAHTESVES-------VGFCEVLPLAALGSVDGGISIWDINT-----MKLRKTVKHEDAVIQIRWLPQSPLLLSCSADRTVRLWDARTGECVRK 295          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: A0A067CID0_SAPPC (ANAPC4_WD40 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CID0_SAPPC)

HSP 1 Score: 58.2 bits (139), Expect = 5.840e-6
Identity = 54/202 (26.73%), Postives = 83/202 (41.09%), Query Frame = 0
Query:   59 LLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGPWIVTCSGDYVIRLWDSRTGLCVRELGTKSGAAITS--FRLSGLCLLTTSLFDTSVLMTSFSQGR 258
            ++F+AS DGT +AWDA S +    Y G       +   ++E  G +++  G D    VW + TGR    L    G V            L    + +  G DR + VW +  G+  +    R   +   +     VG    +   D  +R WD+RT   + EL       ITS  +   G  LLT S  +T  L+ + + G 
Sbjct:  547 IVFSASSDGTVRAWDAHSCQAKADYRGLGMSQPLICVRVSED-GELVLGTGCDRICQVWRVGTGRIAHTLLGHKGKVY------AAEFLLDRTNEVLTGGADRSIRVWDVVSGRNLKSFSCRSTCNDIAVG----VGGQFASAHQDAAVRFWDARTKAPIHELSDVHSDQITSVSYASDGYKLLTNSRDNTLKLLDTRTYGE 737          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: UPI001E1CEEF9 (WD repeat-containing protein 86-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CEEF9)

HSP 1 Score: 57.4 bits (137), Expect = 8.030e-6
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   59 LLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPV---LVTGGGDSAVIVWELT 120
            +L+TAS+DG  +A+DA+SG     + GH  GVTC+   + E  G V   +V+GG D+ + VW  T
Sbjct:  305 ILYTASNDGLVRAFDAKSGALKRKFKGHDSGVTCMVVCVKEQEGEVFTWIVSGGNDNTIKVWNAT 369          
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Match: T0RRC0_SAPDV (ANAPC4_WD40 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRC0_SAPDV)

HSP 1 Score: 57.4 bits (137), Expect = 8.570e-6
Identity = 54/202 (26.73%), Postives = 83/202 (41.09%), Query Frame = 0
Query:   59 LLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTESYGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQAYRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGPWIVTCSGDYVIRLWDSRTGLCVRELGTKSGAAITS--FRLSGLCLLTTSLFDTSVLMTSFSQGR 258
            ++F+AS DGT +AWDA S +    Y G       +   ++E  G +++  G D    VW + TGR    L    G V            L    + +  G DR + VW +  G+  +    R   +   +     VG    +   D  +R WD+RT   +REL       ITS  +   G  LLT S  +   L+ + + G 
Sbjct:  197 VVFSASSDGTVRAWDAHSCQAKADYRGLGMSQPLICVRVSED-GELVLGTGCDRICQVWRVGTGRIAHTLLGHKGKVY------AAEFLLDRANEVLTGGADRSIRVWDVVSGRNLKSFSCRSTCNDIAVG----VGGQFASAHQDGAVRFWDARTKAPIRELSDVHSDQITSVSYASDGYKLLTNSRDNALKLLDARTYGE 387          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10218.358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G0H0_ECTSI1.690e-18197.37F-box domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YXW5_9STRA2.250e-1829.89Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A072VPK7_MEDTR1.750e-1030.49Putative transcription factor WD40-like family n=1... [more]
A0A8E2J4G8_9APHY1.240e-630.46WD40 repeat-like protein n=1 Tax=Obba rivulosa Tax... [more]
A0A6A4VLT3_AMPAM1.840e-643.75WD repeat-containing protein 86 n=3 Tax=Amphibalan... [more]
A0A485L6R2_9STRA3.550e-628.21Aste57867_16942 protein n=1 Tax=Aphanomyces stella... [more]
A0A4P9XZX6_9FUNG4.970e-623.08Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A067CID0_SAPPC5.840e-626.73ANAPC4_WD40 domain-containing protein n=1 Tax=Sapr... [more]
UPI001E1CEEF98.030e-641.54WD repeat-containing protein 86-like n=1 Tax=Portu... [more]
T0RRC0_SAPDV8.570e-626.73ANAPC4_WD40 domain-containing protein n=1 Tax=Sapr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 105..119
score: 32.46
coord: 60..74
score: 37.63
coord: 198..212
score: 31.67
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 76..118
e-value: 0.0074
score: 25.5
coord: 174..211
e-value: 1.6
score: 15.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 195..211
e-value: 0.068
score: 14.1
coord: 83..117
e-value: 0.021
score: 15.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 83..127
score: 11.177
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 54..142
e-value: 1.1E-16
score: 62.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 147..259
e-value: 3.0E-14
score: 54.4
NoneNo IPR availablePANTHERPTHR44156:SF8SUPERNUMERARY LIMBS, ISOFORM Bcoord: 153..233
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 153..233
NoneNo IPR availablePANTHERPTHR44156:SF8SUPERNUMERARY LIMBS, ISOFORM Bcoord: 57..180
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 57..180
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 198..212
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 60..74
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 105..119
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 59..220
score: 18.273
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 59..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10218contigEcto-sp8_S_contig10218:3272..6251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10218.358.1mRNA_Ecto-sp8_S_contig10218.358.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10218 1072..6869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10218.358.1 ID=prot_Ecto-sp8_S_contig10218.358.1|Name=mRNA_Ecto-sp8_S_contig10218.358.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=267bp
MQGRGRGIDRAGWAFDDGNNHDAPNAWSEEKGGQENDPFVGQRPDDGKGG
AGGEQREVLLFTASDDGTAKAWDARSGRFVCLYAGHTRGVTCLQATLTES
YGPVLVTGGGDSAVIVWELTTGRCLEKLETGAGLVINPGGPGPRVGCLQA
YRDTIVVGEDRHVSVWSLRKGQRPRLARARFCEHQRPIRRLEMVGPWIVT
CSGDYVIRLWDSRTGLCVRELGTKSGAAITSFRLSGLCLLTTSLFDTSVL
MTSFSQGRGGDGKGSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf