prot_Ecto-sp8_S_contig102139.350.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102139.350.1
Unique Nameprot_Ecto-sp8_S_contig102139.350.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.100e-20
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQVR 43
            MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQ R
Sbjct:   10 MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQAR 52          
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 8.550e-6
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    2 KSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQVR 43
            KS G    G+ +P   LYR+I +E+PR+LTIYDVDMD A  R
Sbjct:   11 KSGGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVAR 52          
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Match: A0A6T8KLM5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8KLM5_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 2.730e-5
Identity = 19/31 (61.29%), Postives = 25/31 (80.65%), Query Frame = 0
Query:   13 SPATQLYRAIAKEVPRILTIYDVDMDFAQVR 43
            +PA +LYRA+AKE+P +LTIYD+DMD    R
Sbjct:   18 NPAARLYRAVAKEIPFVLTIYDIDMDIPDAR 48          
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Match: A0A0P1B7E0_PLAHL (NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7E0_PLAHL)

HSP 1 Score: 46.2 bits (108), Expect = 5.700e-5
Identity = 20/37 (54.05%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    7 SRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQVR 43
            S   TASPA  LYR I K+VPR+LT+YD+ M+ ++ R
Sbjct:   11 SAASTASPAVTLYRYITKQVPRVLTLYDISMEPSEAR 47          
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Match: A0A7S2S5W3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W3_9STRA)

HSP 1 Score: 45.8 bits (107), Expect = 7.400e-5
Identity = 18/29 (62.07%), Postives = 26/29 (89.66%), Query Frame = 0
Query:    9 TGTASPATQLYRAIAKEVPRILTIYDVDM 37
            T +A+P+ +LYR+I KE+PR+LTIYD+DM
Sbjct:   13 TASANPSARLYRSIVKELPRVLTIYDIDM 41          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102139.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPR2_ECTSI3.100e-2097.67NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A835YPN0_9STRA8.550e-654.76NADH dehydrogenase (Fragment) n=1 Tax=Tribonema mi... [more]
A0A6T8KLM5_9STRA2.730e-561.29Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A0P1B7E0_PLAHL5.700e-554.05NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit... [more]
A0A7S2S5W3_9STRA7.400e-562.07Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102139contigEcto-sp8_S_contig102139:43..171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102139.350.1mRNA_Ecto-sp8_S_contig102139.350.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102139 43..171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102139.350.1 ID=prot_Ecto-sp8_S_contig102139.350.1|Name=mRNA_Ecto-sp8_S_contig102139.350.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQVR
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