prot_Ecto-sp8_S_contig1019.311.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig1019.311.1
Unique Name	prot_Ecto-sp8_S_contig1019.311.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	302

Homology

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BLAST of mRNA_Ecto-sp8_S_contig1019.311.1 vs. uniprot
Match: D7G8W0_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W0_ECTSI)

HSP 1 Score: 558 bits (1439), Expect = 2.330e-200
Identity = 290/301 (96.35%), Postives = 295/301 (98.01%), Query Frame = 0

Query:    1 MTSADVFGDLTVQVLRGINLQNLKAFGTCNPYVLVKMASSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSKEGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPVFFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVILCSRPVQCRVWMPWLFWAMCKSPLVHKTLLQPPPLPPSGTQQ 301
            M SADVFGDLTVQVLRGINLQNLKAFGTCNPYVL+KM SSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGS+EGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPV FMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWV+LCSRPVQCRVWMPWLFWAMCKSP++HK LLQPPP  PSGTQQ
Sbjct:    1 MASADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSPILHKALLQPPPHSPSGTQQ 301

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig1019.311.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig1019.311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8W0_ECTSI	2.330e-200	96.35	C2 domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 9..105 e-value: 2.6E-5 score: 33.6
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 8..81 e-value: 2.7E-11 score: 43.7
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..94 score: 12.01
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 8..95 e-value: 1.1E-13 score: 53.3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 234..238
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 239..261
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 262..301
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..213
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..233
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 7..80
None	No IPR available	TMHMM	TMhelix		coord: 239..261
None	No IPR available	TMHMM	TMhelix		coord: 195..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig1019	contig	Ecto-sp8_S_contig1019:1369..7447 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig1019.311.1	mRNA_Ecto-sp8_S_contig1019.311.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig1019 1369..8375 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig1019.311.1 ID=prot_Ecto-sp8_S_contig1019.311.1|Name=mRNA_Ecto-sp8_S_contig1019.311.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=302bp
MTSADVFGDLTVQVLRGINLQNLKAFGTCNPYVLVKMASSPETKTTGVRE
SDANPSWHETFIFRNVASTDALQISLMEKEGSKEGVVSVRGGVRATEWGF
PGVGGGERVLEVTMPCTTDTTGVPNMGTVVLKLQYRAQLKFRAPFGVIKT
AAAKTAILTDKAKIDVVVDKVMNVLFKPVAMAEGVAKRLTKAQKIIYGGS
AAAVSSAVGGGASMTLLALAVPVFFMALLFLPLTLMGGFFLAVAMLVIMP
CVLALGWVILCSRPVQCRVWMPWLFWAMCKSPLVHKTLLQPPPLPPSGTQ
Q*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR035892	C2_domain_sf