prot_Ecto-sp8_S_contig101881.308.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig101881.308.1
Unique Name	prot_Ecto-sp8_S_contig101881.308.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	177

Homology

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A9DD57_HOEPD (RTX toxin n=2 Tax=Hoeflea TaxID=274591 RepID=A9DD57_HOEPD)

HSP 1 Score: 199 bits (507), Expect = 5.450e-56
Identity = 104/146 (71.23%), Postives = 126/146 (86.30%), Query Frame = 0

Query:    1 TSVTTFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSG-DTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVI 145
            TS  TFT+DV N++DE PTDITFTGGTVNETV  GG+IDS+Y+PSG+TVA LS TDAD G D+F++AITNDPSGHFEIVG+EVR++SGQ ID+ETA +HD+TI+VTDA G TY ETITINV D+EG+YT + AG+ ITGT EEDV+
Sbjct: 2032 TSNQTFTIDVTNVVDEAPTDITFTGGTVNETVASGGSIDSSYNPSGATVAVLSTTDADGGIDSFTYAITNDPSGHFEIVGNEVRVRSGQNIDYETATSHDVTIQVTDANGATYLETITINVADYEGSYTTSDAGQNITGTSEEDVL 2177

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A317PJI6_9HYPH (Ca2+-binding RTX toxin-like protein (Fragment) n=1 Tax=Hoeflea marina TaxID=274592 RepID=A0A317PJI6_9HYPH)

HSP 1 Score: 169 bits (429), Expect = 1.520e-45
Identity = 91/146 (62.33%), Postives = 115/146 (78.77%), Query Frame = 0

Query:    1 TSVTTFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDT-FSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVI 145
            TS  TFT+ V N+ D  PTDITFTGGT+ ETV+ GG+ID AYDPSGSTVA LS TDAD  D  F + IT+DPSGHFEIV +E+R++SGQ+IDFE+    D+T+EVTDAGG ++SETI + V+D+ G++TA + GET TGT EEDV+
Sbjct:   22 TSTQTFTLAVQNISDMAPTDITFTGGTLRETVVSGGSIDGAYDPSGSTVAVLSTTDADGPDDGFVYVITSDPSGHFEIVDNEIRVESGQSIDFESQTGFDVTVEVTDAGGFSHSETIRLTVEDYNGSFTAGNGGETATGTSEEDVL 167

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A640W0B8_9RHOB (Cadherin domain-containing protein n=2 Tax=Roseobacter cerasinus TaxID=2602289 RepID=A0A640W0B8_9RHOB)

HSP 1 Score: 142 bits (358), Expect = 5.790e-36
Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 0

Query:   18 PTDITF-TGGTVNETVLDGGTIDSAYDPSGSTVATLSATDAD-SGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVI 145
            PT ++F +GG+VNETV DGGTI +AYDPSGSTV  L  TDA  +GD  S+++  DPSG+FEIVG+E+R++SGQTIDFET  +  +T+  TD  GNT+ + +TINV DFEG+YT   A E + GT EEDVI
Sbjct: 1122 PTAVSFASGGSVNETVADGGTIATAYDPSGSTVGVLQTTDASGAGDAHSYSLVADPSGNFEIVGNEIRVRSGQTIDFETDTSFTVTVRTTDISGNTHDQVLTINVNDFEGSYTVAGAAENVVGTSEEDVI 1251

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: UPI001653326D (cadherin domain-containing protein n=1 Tax=Roseobacter litoralis TaxID=42443 RepID=UPI001653326D)

HSP 1 Score: 122 bits (306), Expect = 5.290e-29
Identity = 78/150 (52.00%), Postives = 98/150 (65.33%), Query Frame = 0

Query:   12 NLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDF-------EGAYTATSAG---ETITGTREEDVIDAHADG 151
            N+++  PTDIT +  TV E        +SA    G+ VATLS TDA++GDTF++AITNDPSG FEIVGDE+R+ SG  IDFETA +HD+T++VTDAGG TYSET T+ V D        +G  T T  G    +I+G    D I AHADG
Sbjct:  698 NVLNTAPTDITSSASTVAE--------NSAV---GTVVATLSTTDANAGDTFTYAITNDPSGFFEIVGDEIRVASGADIDFETATSHDVTVQVTDAGGATYSETFTLTVSDTAENLQLGDGGVTFTDVGVAETSISGGTGNDSITAHADG 836

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A0M7B2T0_9HYPH (Hemolysin IA n=2 Tax=Roseibium album TaxID=311410 RepID=A0A0M7B2T0_9HYPH)

HSP 1 Score: 114 bits (285), Expect = 3.720e-26
Identity = 62/122 (50.82%), Postives = 83/122 (68.03%), Query Frame = 0

Query:    5 TFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGA 126
            TF++DV N++DE PTDI   GG ++E              +G+ VATLS TD D+GD+ +++ITNDPSG+FEIVGDE+R+  G  +D E A+TH IT++VTDA G TYSE +TI V D   A
Sbjct:  491 TFSIDVTNIIDETPTDIETAGGAIDEN-----------SSAGAVVATLSTTDKDAGDSHTYSITNDPSGYFEIVGDEIRVSDGAKLDHERADTHTITVQVTDAAGLTYSEDVTITVNDVNEA 601

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A3P1SR83_9GAMM (Uncharacterized protein (Fragment) n=2 Tax=Amphritea balenae TaxID=452629 RepID=A0A3P1SR83_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 1.090e-24
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 0

Query:    6 FTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETIT-GTREEDVID 146
            F + VNNL +EGPTDIT +GG+V+E              +G  VATLSA+D DSG+TFS+++T+D  G FE+VG+E+R+K G  ++FETAE HD+T+ VTD+ GNTY E   + V D     TA +   T+  G  +E V D
Sbjct: 1079 FDLSVNNL-NEGPTDITLSGGSVDENST-----------AGVVVATLSASDQDSGETFSYSLTDDAGGRFEVVGNEIRVKEGADLNFETAEDHDVTVRVTDSDGNTYDENFNLQVNDLFEDLTAETPNLTVNLGADQETVYD 1208

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A6N6SZ44_9HYPH (Uncharacterized protein (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SZ44_9HYPH)

HSP 1 Score: 108 bits (271), Expect = 1.270e-24
Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 0

Query:   16 EGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITG 138
            E PTDIT TGGTV E              +G+ VATL A D D+G++F++A+ +DPSG FE+VG+EVR+K+G T+D+E+A  HDIT+ VTDAGG ++SET+T+ V +  G+   T+  + + G
Sbjct:  281 EAPTDITVTGGTVEENAA-----------AGTVVATLGAVDPDAGESFTYALASDPSGKFEVVGNEVRVKAGATLDYESATAHDITVTVTDAGGLSHSETLTVAVTNQSGSIVGTAGNDVLNG 392

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A426W415_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium (ex Lamellibrachia satsuma) TaxID=2496632 RepID=A0A426W415_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 5.190e-21
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0

Query:    5 TFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVI 145
            T T+DV ++ +E P DI F+G +++E              +G+ VA LSATD D G+ FS+A+T+DPSG+FEIVG+++R+K G  ID+E +  H++T++VTD+ GN+++E +TI+V+D +       AG  + GT   D +
Sbjct:  328 TVTIDVTDV-NEAPVDIIFSGDSLDENA-----------EAGTVVANLSATDEDGGEVFSYALTDDPSGNFEIVGNQIRVKEGADIDYEDSSEHNLTVQVTDSDGNSFAEMVTIDVRDVDER----PAGMVLLGTNNADQL 452

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A8G1E8N7_9GAMM (Uncharacterized protein n=6 Tax=Gammaproteobacteria bacterium (ex Lamellibrachia satsuma) TaxID=2496632 RepID=A0A8G1E8N7_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 6.280e-21
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0

Query:    5 TFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVI 145
            T T+DV ++ +E P DI F+G +++E              +G+ VA LSATD D G+ FS+A+T+DPSG+FEIVG+++R+K G  ID+E +  H++T++VTD+ GN+++E +TI+V+D +       AG  + GT   D +
Sbjct: 1206 TVTIDVTDV-NEAPVDIIFSGDSLDENA-----------EAGTVVANLSATDEDGGEVFSYALTDDPSGNFEIVGNQIRVKEGADIDYEDSSEHNLTVQVTDSDGNSFAEMVTIDVRDVDER----PAGMVLLGTNNADQL 1330

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BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Match: A0A3P1SNF9_9GAMM (Tandem-95 repeat protein n=1 Tax=Amphritea balenae TaxID=452629 RepID=A0A3P1SNF9_9GAMM)

HSP 1 Score: 99.0 bits (245), Expect = 8.860e-21
Identity = 51/101 (50.50%), Postives = 73/101 (72.28%), Query Frame = 0

Query:   46 GSTVATLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDITIEVTDAGGNTYSETITINVQDF-EGAYTATSAGETITGTREEDVI 145
            G+ V  LSATD D  DTF+F+I NDP+ +FEIVG+E+R+K+G T+D+E+A++HDIT+ VTDAGG TY E +T+ V+D  E    AT+ G T+      ++I
Sbjct: 1604 GAVVGYLSATDPDVVDTFTFSIINDPANNFEIVGNEIRVKAGATLDYESAQSHDITVRVTDAGGLTYDEVVTVQVEDINESPTVATNTGSTVAEGSTNNII 1704

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig101881.308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A9DD57_HOEPD	5.450e-56	71.23	RTX toxin n=2 Tax=Hoeflea TaxID=274591 RepID=A9DD5...	[more]
A0A317PJI6_9HYPH	1.520e-45	62.33	Ca2+-binding RTX toxin-like protein (Fragment) n=1...	[more]
A0A640W0B8_9RHOB	5.790e-36	58.46	Cadherin domain-containing protein n=2 Tax=Roseoba...	[more]
UPI001653326D	5.290e-29	52.00	cadherin domain-containing protein n=1 Tax=Roseoba...	[more]
A0A0M7B2T0_9HYPH	3.720e-26	50.82	Hemolysin IA n=2 Tax=Roseibium album TaxID=311410 ...	[more]
A0A3P1SR83_9GAMM	1.090e-24	46.48	Uncharacterized protein (Fragment) n=2 Tax=Amphrit...	[more]
A0A6N6SZ44_9HYPH	1.270e-24	47.15	Uncharacterized protein (Fragment) n=1 Tax=Hyphomi...	[more]
A0A426W415_9GAMM	5.190e-21	40.43	Uncharacterized protein (Fragment) n=1 Tax=Gammapr...	[more]
A0A8G1E8N7_9GAMM	6.280e-21	40.43	Uncharacterized protein n=6 Tax=Gammaproteobacteri...	[more]
A0A3P1SNF9_9GAMM	8.860e-21	50.50	Tandem-95 repeat protein n=1 Tax=Amphritea balenae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002126	Cadherin-like	SMART	SM00112	CA_2	coord: 52..128 e-value: 8.2E-5 score: 32.0
IPR002126	Cadherin-like	PFAM	PF00028	Cadherin	coord: 44..121 e-value: 3.0E-10 score: 40.4
None	No IPR available	GENE3D	2.60.40.60		coord: 40..123 e-value: 2.6E-13 score: 52.3
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 44..136 score: 13.005
IPR011049	Serralysin-like metalloprotease, C-terminal	SUPERFAMILY	51120	beta-Roll	coord: 11..177
IPR015919	Cadherin-like superfamily	SUPERFAMILY	49313	Cadherin-like	coord: 45..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig101881	contig	Ecto-sp8_S_contig101881:6..536 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig101881.308.1	mRNA_Ecto-sp8_S_contig101881.308.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig101881 6..536 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig101881.308.1 ID=prot_Ecto-sp8_S_contig101881.308.1|Name=mRNA_Ecto-sp8_S_contig101881.308.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=177bp
TSVTTFTVDVNNLMDEGPTDITFTGGTVNETVLDGGTIDSAYDPSGSTVA
TLSATDADSGDTFSFAITNDPSGHFEIVGDEVRIKSGQTIDFETAETHDI
TIEVTDAGGNTYSETITINVQDFEGAYTATSAGETITGTREEDVIDAHAD
GSTIDGGWGSDTINGSASDDDITGNRG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002126	Cadherin-like_dom
IPR011049	Serralysin-like_metalloprot_C
IPR015919	Cadherin-like_sf