prot_Ecto-sp8_S_contig101595.264.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig101595.264.1
Unique Nameprot_Ecto-sp8_S_contig101595.264.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length110
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig101595.264.1 vs. uniprot
Match: D8LPC3_ECTSI (EsV-1-92 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPC3_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 6.940e-72
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0 
Query:    1 CSQTLDGYNPNPFYASGMCPDYMKSECNLGGKLWQNQWDMHKKNIKEFNAERVFHASMGIPTQVVGYGYQPQQQPPLLPPTSSQVFSSMRQMHPHKFQGRNFRPSQFYP 109
            CSQTLDGYNPNPFYASGMCPDYM+SECNLGGKLWQNQWDMHKKNIKEFNAERVFHASMGIPTQVVGYGYQ QQ  PLLPPTSSQVFS+MRQMHPHKFQG   +P QFYP
Sbjct:   14 CSQTLDGYNPNPFYASGMCPDYMRSECNLGGKLWQNQWDMHKKNIKEFNAERVFHASMGIPTQVVGYGYQSQQPHPLLPPTSSQVFSTMRQMHPHKFQGPILKPGQFYP 122
[Close]
BLAST of mRNA_Ecto-sp8_S_contig101595.264.1 vs. uniprot
Match: Q8QNI5_ESV1K (EsV-1-92 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNI5_ESV1K)

HSP 1 Score: 218 bits (556), Expect = 6.940e-72
Identity = 98/109 (89.91%), Postives = 103/109 (94.50%), Query Frame = 0 
Query:    1 CSQTLDGYNPNPFYASGMCPDYMKSECNLGGKLWQNQWDMHKKNIKEFNAERVFHASMGIPTQVVGYGYQPQQQPPLLPPTSSQVFSSMRQMHPHKFQGRNFRPSQFYP 109
            CSQTLDGYNPNPFYASGMCPDYMKSECNLGGKLWQNQWDMHKKNIK+FNAERVFHASMGIPTQVVGYGYQPQQ PPLLPPTSSQVF++MRQM P KFQGR+ +  QFYP
Sbjct:   14 CSQTLDGYNPNPFYASGMCPDYMKSECNLGGKLWQNQWDMHKKNIKDFNAERVFHASMGIPTQVVGYGYQPQQPPPLLPPTSSQVFANMRQMQPRKFQGRHLQAGQFYP 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101595.264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPC3_ECTSI6.940e-7290.83EsV-1-92 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Q8QNI5_ESV1K6.940e-7289.91EsV-1-92 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig101595contigEcto-sp8_S_contig101595:212..541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig101595.264.1mRNA_Ecto-sp8_S_contig101595.264.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig101595 212..541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig101595.264.1 ID=prot_Ecto-sp8_S_contig101595.264.1|Name=mRNA_Ecto-sp8_S_contig101595.264.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=110bp
CSQTLDGYNPNPFYASGMCPDYMKSECNLGGKLWQNQWDMHKKNIKEFNA
ERVFHASMGIPTQVVGYGYQPQQQPPLLPPTSSQVFSSMRQMHPHKFQGR
NFRPSQFYP*
back to top