mRNA_Ecto-sp8_S_contig99517.31821.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig99517.31821.1
Unique NamemRNA_Ecto-sp8_S_contig99517.31821.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: D7FWL4_ECTSI (Asparaginase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL4_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.750e-21
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD
Sbjct:  187 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 233          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A401G3M1_9DELT (Asparaginase n=1 Tax=Desulfonema ishimotonii TaxID=45657 RepID=A0A401G3M1_9DELT)

HSP 1 Score: 68.6 bits (166), Expect = 2.460e-12
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPL E+ ND+R N++ AM+IA +  IPEVCLFF N+LLR NR+VKVD
Sbjct:  118 IPLCEIRNDSRENLITAMLIAANYNIPEVCLFFGNRLLRGNRSVKVD 164          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A0D2WQX9_CAPO3 (Asparaginase (Fragment) n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQX9_CAPO3)

HSP 1 Score: 67.4 bits (163), Expect = 2.760e-12
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IP A+VYNDARRN++V+++ A    IPEVC+FF+N+LLR NRA KVD
Sbjct:   10 IPFADVYNDARRNLIVSVLYAARFDIPEVCIFFNNQLLRGNRASKVD 56          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A7Y3DSN1_9DELT (Asparaginase n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3DSN1_9DELT)

HSP 1 Score: 68.2 bits (165), Expect = 3.320e-12
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPL EV NDAR N++ AM+IA + KIPEVCL F +KLLR NRA+KVD
Sbjct:  118 IPLCEVRNDARENLITAMLIAANFKIPEVCLCFGSKLLRGNRAIKVD 164          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A7C6LWM9_9FIRM (Asparaginase n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7C6LWM9_9FIRM)

HSP 1 Score: 67.0 bits (162), Expect = 8.720e-12
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPL EV NDAR N++ A+MIAG  K+PEVCLFF N+L R NRA KV 
Sbjct:  118 IPLCEVRNDARDNLITALMIAGYYKVPEVCLFFGNELYRGNRATKVS 164          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: UPI001A9C02E5 (asparaginase n=1 Tax=Desulfonema limicola TaxID=45656 RepID=UPI001A9C02E5)

HSP 1 Score: 66.2 bits (160), Expect = 1.640e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPL E+ ND+R N++ AM+IA +  IPEVCLFF +KL+R NR+VKVD
Sbjct:  118 IPLCEIRNDSRDNLITAMLIAANYNIPEVCLFFGSKLIRGNRSVKVD 164          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A7S3HHR8_9STRA (Asparaginase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHR8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.220e-11
Identity = 28/47 (59.57%), Postives = 41/47 (87.23%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IP A+VYNDARRN++V+M++A + + PEVCL F++K++R NRAVKV+
Sbjct:  106 IPFAQVYNDARRNLLVSMIVAATCEFPEVCLCFNDKIMRGNRAVKVN 152          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A1E1IRX2_LEIGU (Asparaginase n=4 Tax=Viannia TaxID=37616 RepID=A0A1E1IRX2_LEIGU)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-11
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKV 138
            +PLAE YNDARRNVV++MM+A + KI EVC+FF++ LLR NR  KV
Sbjct:  136 VPLAEPYNDARRNVVISMMLASNPKICEVCIFFNDSLLRGNRCDKV 181          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A0N1HVX8_LEPSE (Asparaginase n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1HVX8_LEPSE)

HSP 1 Score: 64.7 bits (156), Expect = 6.470e-11
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKV 138
            +PLAE YNDARRNV+++MMIA   KI EVC+FF++ L R NR  KV
Sbjct:  151 VPLAEPYNDARRNVIISMMIASDPKICEVCVFFNDSLFRGNRCTKV 196          
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Match: A0A7S7J2Y9_9FIRM (Asparaginase n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7S7J2Y9_9FIRM)

HSP 1 Score: 64.3 bits (155), Expect = 8.070e-11
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1
Query:    1 IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVD 141
            IPL E+ NDAR N++ A+MIAG   +PEVCLFF N+L R NRA K+ 
Sbjct:  118 IPLCEIRNDARDNLITALMIAGHYHVPEVCLFFGNELYRGNRATKIS 164          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99517.31821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWL4_ECTSI1.750e-21100.00Asparaginase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A401G3M1_9DELT2.460e-1263.83Asparaginase n=1 Tax=Desulfonema ishimotonii TaxID... [more]
A0A0D2WQX9_CAPO32.760e-1263.83Asparaginase (Fragment) n=1 Tax=Capsaspora owczarz... [more]
A0A7Y3DSN1_9DELT3.320e-1268.09Asparaginase n=1 Tax=Desulfobacterales bacterium T... [more]
A0A7C6LWM9_9FIRM8.720e-1265.96Asparaginase n=1 Tax=Clostridiales bacterium TaxID... [more]
UPI001A9C02E51.640e-1161.70asparaginase n=1 Tax=Desulfonema limicola TaxID=45... [more]
A0A7S3HHR8_9STRA3.220e-1159.57Asparaginase n=1 Tax=Spumella elongata TaxID=89044... [more]
A0A1E1IRX2_LEIGU3.430e-1165.22Asparaginase n=4 Tax=Viannia TaxID=37616 RepID=A0A... [more]
A0A0N1HVX8_LEPSE6.470e-1163.04Asparaginase n=1 Tax=Leptomonas seymouri TaxID=568... [more]
A0A7S7J2Y9_9FIRM8.070e-1159.57Asparaginase n=1 Tax=Clostridiales bacterium TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99517contigEcto-sp8_S_contig99517:7..153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score94.4
Seed ortholog evalue1.6e-17
Seed eggNOG ortholog2880.D7FWL4
Model size147
KEGG rclassRC00010,RC02798
KEGG koko:K01424
KEGG ReactionR00485
KEGG Pathwayko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
EggNOG free text desc.asparagine catabolic process
EggNOG OGsCOG0252@1,KOG0503@2759
EC3.5.1.1
Cds size147
COG Functional cat.EJ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145364.9649336-CDS-Ecto-sp8_S_contig99517:6..1531681145364.9649336-CDS-Ecto-sp8_S_contig99517:6..153Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig99517 7..153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99517.31821.1prot_Ecto-sp8_S_contig99517.31821.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig99517 7..153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig99517.31821.1

>prot_Ecto-sp8_S_contig99517.31821.1 ID=prot_Ecto-sp8_S_contig99517.31821.1|Name=mRNA_Ecto-sp8_S_contig99517.31821.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=49bp
IPLAEVYNDARRNVVVAMMIAGSQKIPEVCLFFSNKLLRANRAVKVDR*
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mRNA from alignment at Ecto-sp8_S_contig99517:7..153-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig99517.31821.1 ID=mRNA_Ecto-sp8_S_contig99517.31821.1|Name=mRNA_Ecto-sp8_S_contig99517.31821.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=147bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99517:7..153- (Ectocarpus species8 EcLAC_412)
ATTCCGCTCGCGGAGGTGTACAACGATGCGCGTCGCAACGTGGTAGTGGC CATGATGATCGCGGGCAGCCAGAAGATACCGGAGGTGTGCCTCTTCTTTT CCAACAAGCTCTTGCGAGCGAACAGGGCGGTGAAGGTCGACAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig99517:7..153-

>mRNA_Ecto-sp8_S_contig99517.31821.1 ID=mRNA_Ecto-sp8_S_contig99517.31821.1|Name=mRNA_Ecto-sp8_S_contig99517.31821.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=147bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99517:7..153- (Ectocarpus species8 EcLAC_412)
ATTCCGCTCGCGGAGGTGTACAACGATGCGCGTCGCAACGTGGTAGTGGC
CATGATGATCGCGGGCAGCCAGAAGATACCGGAGGTGTGCCTCTTCTTTT
CCAACAAGCTCTTGCGAGCGAACAGGGCGGTGAAGGTCGACAGGTGA
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