mRNA_Ecto-sp8_S_contig9927.31785.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9927.31785.1 vs. uniprot
Match: D7FI62_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI62_ECTSI) HSP 1 Score: 1287 bits (3331), Expect = 0.000e+0 Identity = 765/842 (90.86%), Postives = 776/842 (92.16%), Query Frame = 1
Query: 1 MMSSTATPRSTGTPAGPRLAPGPVPAAPPTATTPTRFYHNNEAPRLSKALSVVANLLKSPAKVSSRLFDVGKAIVLLALTQRFSPTSIKVRQLEQSSGADRSRGAVNTISTWARQVSKQRANKDQAVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTALAKELRGEAGRDSPSPFSSSATSGDKGGMATAXXXXXXXXXXXXXXVAIEDVTPHGGLPASTDSAVTGADTAVQASLEGVNAKPAKAIAATATADESKREFPAPPATATAAEVGATAGDVVGPGTPSASSHKEENIDSAAATPGMVVPASLETGTPAPGVKSVSTAPADMAASCPGGPSSSRKCSALKVGKGEGGWGGGRGGGHLVKEGHVVGTRDGRSSTVRQGSNRQKPVVANAGRPSAQASANAAARARSRGLAFIARPAGTPFSSGAGERGVPRDGQVKAAAANRALGGVRGGGPRKQGCELSRSDRDGAVVAATALXXXXXXXXXXXXXXGNFAQEKRGDNDGVHDDESAGGNHRHRTRPMVMQLPRPTHRLLRERSQQDSPNTYTSVELRRTKGLLSKALSDQERLAAALVQQRKLHQEDVERHAAELREMRKENLVLGGQRSRLEALLLQAYRDMAELQGKKPETESHEKDESKHTSVPCGCPRPEEGXXXXXXXXXXXXXXXXEPSKHMSAGLPSPGSYAGSDTSDGSGGEGTCGSDDHEPDGHDHFEEPCPDTASTCPSLESETLDRFYGVGFLASLLPLSGSNGGSGGARGDSAAGVVATEKGAKLGEGGGGGVFDLKIADEQLQGQFAAAGVGRGLVLKILRKPKKGTRDTGMREIRMLARY 2526
MMSSTATPRS GTPAGPRLAPG VPAAPPTATTPTRFYHNNE PRLSKALSVVANLLKSPAKVSSRLFDVGKAIVLLALTQRFSPTSIKVRQLEQSSGADRSRGAVNTISTWARQVSKQRANKDQAVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTAL KEL GEAG DSPSPFSSSATSGDKGGMATA XXXXXXX +A +DV P LPASTDSAVTGADTAVQASLEGVNAK A AIAATATADESKR+F APPATATAAEVGATAGDVVGPG PSASSH EENI SAAATPGMVVPASLETGTPAPGVKSVS APADMAA C GGPSSSRKCSALKVGKGEGGWGGGRGGGHLVKEGHVVGTRDGRSSTVRQGSNRQKP V NAGRPSA ASANAAARARSRGLAFIARPAGTPFSSGAGERGVPRD QVKAAAANRA GGVRGGGPRKQGCELSRSDRDGAV AATA XXXXXXXXXXXXX GNFAQEKRG+NDGV DDE AGGNHRHRTRPMVMQL RPTHR LR+RSQQDSPNT TS ELRRTKGLLSKALSDQERLAAALVQQRKLHQEDVERHAAELREMRKENLVL GQRSRLEALLLQAYRDM ELQG+K ETESHE DESKHTSVPCGCPRPEEGXXXXXXXXXXXXXXXXEPSKH+SAGLPSPGSYAGSD S GSG EGT GSDDHEPDGHD FEEPC DTA LDRF GVGFLASLLPLSGS+GGSGGARGD AGVVATEKGAKLGEGGGGGVFDLKIADEQLQGQFAAAGVG+GLVLK L+KPKKGTRDTGMREIRMLA +
Sbjct: 1 MMSSTATPRSAGTPAGPRLAPGSVPAAPPTATTPTRFYHNNEVPRLSKALSVVANLLKSPAKVSSRLFDVGKAIVLLALTQRFSPTSIKVRQLEQSSGADRSRGAVNTISTWARQVSKQRANKDQAVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTALIKELHGEAGSDSPSPFSSSATSGDKGGMATAAAXXXXXXXTTVAAIATDDVVPRRRLPASTDSAVTGADTAVQASLEGVNAKSAIAIAATATADESKRQFRAPPATATAAEVGATAGDVVGPGKPSASSHNEENIGSAAATPGMVVPASLETGTPAPGVKSVSAAPADMAALCRGGPSSSRKCSALKVGKGEGGWGGGRGGGHLVKEGHVVGTRDGRSSTVRQGSNRQKPTVVNAGRPSAPASANAAARARSRGLAFIARPAGTPFSSGAGERGVPRDRQVKAAAANRAPGGVRGGGPRKQGCELSRSDRDGAVAAATAXXXXXXXXXXXXXXAGNFAQEKRGENDGVRDDEGAGGNHRHRTRPMVMQLSRPTHRPLRDRSQQDSPNTNTSAELRRTKGLLSKALSDQERLAAALVQQRKLHQEDVERHAAELREMRKENLVLDGQRSRLEALLLQAYRDMTELQGQKTETESHEDDESKHTSVPCGCPRPEEGXXXXXXXXXXXXXXXXEPSKHVSAGLPSPGSYAGSDASGGSGAEGTRGSDDHEPDGHDRFEEPCLDTA----------LDRFNGVGFLASLLPLSGSHGGSGGARGDIVAGVVATEKGAKLGEGGGGGVFDLKIADEQLQGQFAAAGVGQGLVLKTLKKPKKGTRDTGMREIRMLASF 832
BLAST of mRNA_Ecto-sp8_S_contig9927.31785.1 vs. uniprot
Match: A0A6H5KSE9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE9_9PHAE) HSP 1 Score: 1077 bits (2786), Expect = 0.000e+0 Identity = 682/994 (68.61%), Postives = 706/994 (71.03%), Query Frame = 1
Query: 178 PAKVSSRLFDVGKAIVLLALTQRFSPTSIKVRQLEQSSGADRSRGAVNTISTWARQVSKQRANKDQAVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTALAKELRGEAGRDSPSPFSSSATSGDKGGMATAXXXXXXXXXXXXXXVAIEDVTPHGGLPASTDSAVTGADTAVQASLEGVNAKPAKAIAATATADESKREFPAPPATATAAEVGATAGDVVGPGTPSASSHKEENIDSAAATPGMVVPASLETGTPAPGVKSVSTAPADMAASCPGGPSSSRKCSALKVGKGEGGWGGGRGGGHLVKEGHVVGTRDGRSSTVRQGSNRQKPVVANAGRPSAQASANAAARARSRGLAFIARPAGTPFSSGAGERGVPRDGQVKAAAANRALGGVRGGGPRKQGCELSRSDRDGAVVAATALXXXXXXXXXXXXXXGNFAQEKRGDNDGVHDDESAGGNHRHRTRPMVMQLPRPTHRLLRERSQQDSPNTYTSVELRRTKGLLSKALSDQERLAAALVQQRKLHQEDVERHAAELREMRKENLVLGGQRSRLEALLLQAYRDMAELQGKKPETESHEKDESKHTSVPCGCPRPEEGXXXXXXXXXXXXXXXXEPSKHMSAGLPSPGSYAGSDTSDGSGGEGTCGSDDHEPDGHDHFEEPCPDTASTCPSLES-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETLDRFYGVGFLASLLPLSGSNGGSGGARGDSAAGVVATEKGAKLGEGGGGGVFDLKIADEQLQGQFAAAGVGRGLVLKILRKPKKGTRDTGMREIRMLARY 2526
PAKV SRLFDV KAIVLLALTQRFSPTSIKV+QLEQSSGADRSRGAVNTISTWARQVSK+RANKDQ+VLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTAL KELRGEAGRDSPSPF+SSATSGDKGGMAT +A +DV P LPASTDSAVTG TAV+ASLEGVNAKPA AI ATATADESKRE PAP ATA AAEV ATAG++VGPG PSASSHKEENIDSAAATPGMV PASLETGTPAPGVKSVS APADMAASCPGGPSSSRK SALKVGKGEG WG GRGGGHLVKEGHVVGTRDGRSS VRQGS RQKPVVANAGRPSAQASANAAARARSRGLAFIA PAGTPFSSGAGERGVPRDGQV+AAAANRA G RGGGPRKQ CELSRSDRDGAV AAT XXXXXXXXXXXX GNFAQEKRGDNDGVHDDESAGGN+RHRTRPMVMQLPRPTHR LRERSQQDSPNT TS ELRRTKGLLSKALSDQERLAAALVQQRKLHQ+DVERHAAELREMRK+NLVL GQRSRLEALLLQA R+MAELQG+KPETES++ DES HTSVP GC RP+EG XXXXXXXXXXX EPSKH+SAGLPSPGSYAGSDTSDGSGG SD HEPDGHD FEEPCPDTASTCPSLES +TLDRF GVGFLASLLPLSGS+GGSGG RGDSAAGVVATEKG KLGEGGGG VFDLKIADEQLQGQFAAAGVGRGLVLK L+KPKKG RDTG+REIRMLA +
Sbjct: 8 PAKVPSRLFDVSKAIVLLALTQRFSPTSIKVQQLEQSSGADRSRGAVNTISTWARQVSKKRANKDQSVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTALIKELRGEAGRDSPSPFTSSATSGDKGGMATTGAA-----------IAPDDVAPRRRLPASTDSAVTGVATAVKASLEGVNAKPAIAIVATATADESKREVPAPSATAVAAEVDATAGNMVGPGKPSASSHKEENIDSAAATPGMVRPASLETGTPAPGVKSVSAAPADMAASCPGGPSSSRKFSALKVGKGEGDWGDGRGGGHLVKEGHVVGTRDGRSSKVRQGSTRQKPVVANAGRPSAQASANAAARARSRGLAFIAHPAGTPFSSGAGERGVPRDGQVEAAAANRAQGDARGGGPRKQACELSRSDRDGAVAAATXXXXXXXXXXXXXXAGGNFAQEKRGDNDGVHDDESAGGNYRHRTRPMVMQLPRPTHRPLRERSQQDSPNTNTSAELRRTKGLLSKALSDQERLAAALVQQRKLHQKDVERHAAELREMRKKNLVLDGQRSRLEALLLQANRNMAELQGQKPETESYQDDESAHTSVPSGCSRPQEGENXXXXXXXXXXXYHYEPSKHISAGLPSPGSYAGSDTSDGSGGXXXXXSDGHEPDGHDRFEEPCPDTASTCPSLESGSCSGSDXXXXXEEGSTHDDDXXXXXXXXXXXXXXNRGEKLSTVVSSGFPSLDDGTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASDGSYDGSLTYDENGSGGNSGDSFVGSAATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQRGAIGIECKGVRPALSSRAEALLTYARRKTLDRFNGVGFLASLLPLSGSDGGSGGTRGDSAAGVVATEKGVKLGEGGGGEVFDLKIADEQLQGQFAAAGVGRGLVLKTLKKPKKGKRDTGIREIRMLASF 990
BLAST of mRNA_Ecto-sp8_S_contig9927.31785.1 vs. uniprot
Match: D7FI46_ECTSI (p38 Map Kinase family member (Pmk-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI46_ECTSI) HSP 1 Score: 854 bits (2207), Expect = 4.920e-293 Identity = 589/972 (60.60%), Postives = 636/972 (65.43%), Query Frame = 1
Query: 1 MMSSTATPRSTGTPAGPRLAPGPVPAAPPTATTPTRFYHNNEAPRLSKALSVVANLLKSPAKVSSRLFDVGKAIVLLALTQRFSPTSIKVRQLEQSSGADRSRGAVNTISTWARQVSKQRANKDQAVLELLDNAARAAPATKQTLLEHFGMGGTNPASVCKELSILLTALAKELRGEAGRDSPSPFSSSATSGDKGGMATAXXXXXXXXXXXXXXVAIEDVTPHGGLPASTDSAVTGADTAVQASLEGVNAKPAKAIAATATADESKREFPAPPATATAAEVGATAGDVVGPGTPSASSHKEENIDSAAATPGMVVPASLETGTPAPGVKSVSTAPADMAASCPGGPSSS--RKCSALKVGKGEGGWGGGRGGGHLVKEGHVVGTRDGRSSTVRQGSNRQKPVVANAGRPSAQASANAAARARSRGLAFIARPAGTPFSSGAGERGVPRDGQVKAAAANRALGGVRGGGPRKQGCELSRSDRDGAVVAATALXXXXXXXXXXXXXXGNFAQEKRGDNDGVHDDESAGGNHRHRTRPMVMQLPRPTHRLLRERSQQDSPNTYTSVELRRTKGLLSKALSDQERLAAALVQQRKLHQEDVERHAAELREMRKENLVLGGQRSRLEALLLQAYRDMAELQGKKPETESHEKDESKHTSVPCGCPRPEEGXXXXXXXXXXXXXXXXEPSKHMSAGLPSP------------------------------------GSYAGSDTSDGS--------------------------------GGEGTC----------------GSD--DHEPDGHDHFEEP------------------------------CPD-TASTC-PSLESETLDRFYGVGFLASLLPLSGSNGG----------SGGARGDSAAGVVATEKGAKLGEGGGGGVFDLKIADEQLQGQFAAAGVGRGLVLKILRKPKKGTRDTGMREIRMLARY 2526
M S +ATPRSTGTPAGPRLAPGP+PAAPPTATT +RF+H N+ RL+KALSVVAN+LKSPAKVSSRLFD+GKAIVLLALT RFSPTS+KVRQLEQSS ADRSRGAVNTISTWARQVS QR NKDQAVLELLDNAARAAPATKQTLLE FGMGG+NPASVCKELSILLTAL KEL GEAG DSPS SSSATSGDKGG A A VA EDVTPHGGLPAST V GADT V++SLEG AKPA AIA T TADESK EFPA PATATAAEVGATAGDV+ PG SASSHKE+NID AAATPG+VVPASL TGTPAPGVKSVS APAD AAS PGGPSSS R CSALKVGKGEGGWGGGRGGGHLVKEGHVV TRDGRSSTV QGSNRQKPVVANAGRP+AQASANA AR RSRGLAFIARP G P S A ERGVPRDGQ+KAAAANRA GVRGG K+ CELSR +G V XXXXXXXXXX G A K QD P T S ELRRTKGLLS+AL+D+E+LAAALVQQRKLH+EDVERH L++ ++NL LGGQRSRLE LLLQAY D+AEL+G+K TES + + SK T V GCPR EE XXXXXXXXXXX PSK +S G PSP GS +GS+TS+GS G C G+D D+ DG D P P A C S E LDRF G GFLASLLPLSGS+GG GG G+VATEKG LG+GGGG VFDLKI DEQLQG FA G+G+GLVLK L KP KG +DTGMREIR+LA +
Sbjct: 2 MTSDSATPRSTGTPAGPRLAPGPIPAAPPTATTVSRFHHKNDVRRLTKALSVVANILKSPAKVSSRLFDIGKAIVLLALTHRFSPTSMKVRQLEQSSAADRSRGAVNTISTWARQVSNQRMNKDQAVLELLDNAARAAPATKQTLLERFGMGGSNPASVCKELSILLTALVKELHGEAGSDSPSLSSSSATSGDKGGTAKAVATSATDSATTVAAVATEDVTPHGGLPASTAREVAGADTGVKSSLEGAKAKPAIAIAVTTTADESKHEFPASPATATAAEVGATAGDVIEPGKASASSHKEQNIDGAAATPGVVVPASLGTGTPAPGVKSVSAAPADKAASYPGGPSSSSSRMCSALKVGKGEGGWGGGRGGGHLVKEGHVVETRDGRSSTVCQGSNRQKPVVANAGRPNAQASANAVARVRSRGLAFIARPGGAPLRSSASERGVPRDGQMKAAAANRARRGVRGGDTCKRACELSRPGHNGVVAXXXXXXXXXXXXXXXA---GTIALAK-----------------------------------------QDFPRTNKSAELRRTKGLLSRALNDREKLAAALVQQRKLHEEDVERHEDALQKAHQQNLELGGQRSRLEVLLLQAYGDIAELKGQKSGTESDKDESSKPTCVTSGCPRSEEVGNKSGXXXXXXXXXXXXPSKRISPGPPSPVSPGSCSXXXXXXXXXXXXXSDGHDRDEKLSPALASGSCSGSNTSEGSEEGSTDXXXXXXXXXXXXXXXXXXXXGEKLSIGVSSGCPSLVSDSSYDGSFTYDGNDAGDNPGDGFDGPSAPFSLPXXXXXXXXXXXXXGGAIGLESKGVSRAPSWRAEDCLASARREVLDRFNGAGFLASLLPLSGSDGGXXXXXXXXXRDGG-------GMVATEKGRVLGDGGGGNVFDLKIVDEQLQGHFARTGLGQGLVLKTLNKPAKGHKDTGMREIRVLASF 922 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9927.31785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9927.31785.1 >prot_Ecto-sp8_S_contig9927.31785.1 ID=prot_Ecto-sp8_S_contig9927.31785.1|Name=mRNA_Ecto-sp8_S_contig9927.31785.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=842bp MMSSTATPRSTGTPAGPRLAPGPVPAAPPTATTPTRFYHNNEAPRLSKALback to top mRNA from alignment at Ecto-sp8_S_contig9927:2137..7021+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9927.31785.1 ID=mRNA_Ecto-sp8_S_contig9927.31785.1|Name=mRNA_Ecto-sp8_S_contig9927.31785.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4885bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9927:2137..7021+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9927:2137..7021+ >mRNA_Ecto-sp8_S_contig9927.31785.1 ID=mRNA_Ecto-sp8_S_contig9927.31785.1|Name=mRNA_Ecto-sp8_S_contig9927.31785.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2526bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9927:2137..7021+ (Ectocarpus species8 EcLAC_412)back to top |