mRNA_Ecto-sp8_S_contig99208.31778.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A6H5KTI6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTI6_9PHAE) HSP 1 Score: 144 bits (363), Expect = 3.420e-40 Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFL 234
+G+ASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMM+MAVGDGMADLVGRQ GKHKWRKGGEKSVEGSAAFVSGSFL
Sbjct: 228 SGKASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQLGKHKWRKGGEKSVEGSAAFVSGSFL 305
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: B0CDR8_ACAM1 (Phosphatidate cytidylyltransferase n=4 Tax=Acaryochloris TaxID=155977 RepID=B0CDR8_ACAM1) HSP 1 Score: 77.0 bits (188), Expect = 2.360e-15 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFL 234
TG E L GPL Y L V+ T+ WRTS VG++A+M M GDG+AD+VGR+ G HK EKS GSAA +GSFL
Sbjct: 106 TGNPKEILKGPLFYGLVFVVCTIGFWRTSPVGMLALMMMCGGDGLADIVGRRLGVHKLPFSPEKSWAGSAAMFAGSFL 183
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: W7TNW7_9STRA (Phosphatidate cytidylyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNW7_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.540e-15 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFL 234
+G +E L GPL Y + ++L TVV WR SVVGL+A+ +MA GDGMAD+VGR++G KW KS GS+AF F+
Sbjct: 207 SGNPAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDGMADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFV 284
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A835Z6B9_9STRA (Putative phytol kinase, chloroplast, carboxyterminal half n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B9_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 5.230e-15 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFL 234
+G ASE + GPL Y L + + T++EWR S+VG++A+ +MA GDG+ADLVGR KW KS GS AFV+G F+
Sbjct: 137 SGSASEAVGGPLLYVLVLAVATILEWRASLVGVMAVCQMAAGDGLADLVGRHVKGKKWWFSEHKSYVGSLAFVAGGFV 214
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A7C1F0L3_9CHLR (Phosphatidate cytidylyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1F0L3_9CHLR) HSP 1 Score: 73.9 bits (180), Expect = 3.060e-14 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFL 234
TG E L GPL Y + V+ T++ WRTS VG++A+M M GDG AD++GR+FG K EKS GSAA + GSF+
Sbjct: 97 TGNPREILRGPLYYGVVFVICTIIFWRTSPVGILALMLMCGGDGFADIIGRRFGAAKLPFSREKSWAGSAAMLVGSFV 174
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A845ZTW3_9CYAN (Phosphatidate cytidylyltransferase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A845ZTW3_9CYAN) HSP 1 Score: 73.9 bits (180), Expect = 3.250e-14 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 16 ETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSF 231
E L GPL Y +A V+ T++ WRTS G++A+M M GDG+AD+VGR++GKHK G EKS GSAA GS+
Sbjct: 103 ELLRGPLYYGIAFVVCTLLFWRTSPTGILALMTMCAGDGLADVVGRRWGKHKLPFGSEKSWIGSAAMFVGSW 174
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A7S2A703_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A703_TRICV) HSP 1 Score: 73.6 bits (179), Expect = 3.470e-14 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGK-HKWRKGGEKSVEGSAAF-VSGSFL 234
+G ASE L GPL Y + + T++ WR S++G+ A+ MA GDGMAD++GR+FG+ +KW +KS+ GSAAF +SG+ +
Sbjct: 80 SGSASEALGGPLLYCIVLFFSTLIFWRDSLIGVAAVSVMAAGDGMADIIGRRFGRGNKWWFSNDKSIAGSAAFAISGAVV 159
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A8J6WNX6_9CYAN (Phosphatidate cytidylyltransferase n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6WNX6_9CYAN) HSP 1 Score: 73.9 bits (180), Expect = 3.580e-14 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 4 GRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSF 231
G+ +E L GPL Y +A +L TV+ WR S +G++A+M M GDG+AD+VGR+ GKHK KS GS A GSF
Sbjct: 107 GKPAEILRGPLYYGIAFILCTVLFWRNSPIGILALMLMCGGDGLADIVGRRLGKHKLPFSSHKSWAGSTAMFLGSF 182
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: A0A7S2A6U9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6U9_TRICV) HSP 1 Score: 73.6 bits (179), Expect = 1.570e-13 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGK-HKWRKGGEKSVEGSAAF-VSGSFL 234
+G ASE L GPL Y + + T++ WR S++G+ A+ MA GDGMAD++GR+FG+ +KW +KS+ GSAAF +SG+ +
Sbjct: 274 SGSASEALGGPLLYCIVLFFSTLIFWRDSLIGVAAVSVMAAGDGMADIIGRRFGRGNKWWFSNDKSIAGSAAFAISGAVV 353
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Match: UPI001997DC9E (Phosphatidate cytidylyltransferase n=1 Tax=Cyanobacteria bacterium FACHB-63 TaxID=2692766 RepID=UPI001997DC9E) HSP 1 Score: 70.9 bits (172), Expect = 4.510e-13 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSF 231
TG+ +E L GPL Y + + T+V WR S +G++A+M + GDG+AD+VGR+FG HK +KS GS A GSF
Sbjct: 95 TGKPAEILRGPLYYGIVFTVCTIVFWRHSPIGILALMILCGGDGLADIVGRRFGSHKLFFNAQKSWAGSLAMFVGSF 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99208.31778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig99208.31778.1 >prot_Ecto-sp8_S_contig99208.31778.1 ID=prot_Ecto-sp8_S_contig99208.31778.1|Name=mRNA_Ecto-sp8_S_contig99208.31778.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp TGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMKMAVGDGMADLVGback to top mRNA from alignment at Ecto-sp8_S_contig99208:3..542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig99208.31778.1 ID=mRNA_Ecto-sp8_S_contig99208.31778.1|Name=mRNA_Ecto-sp8_S_contig99208.31778.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=540bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99208:3..542- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig99208:3..542- >mRNA_Ecto-sp8_S_contig99208.31778.1 ID=mRNA_Ecto-sp8_S_contig99208.31778.1|Name=mRNA_Ecto-sp8_S_contig99208.31778.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=234bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99208:3..542- (Ectocarpus species8 EcLAC_412)back to top |