mRNA_Ecto-sp8_S_contig9914.31770.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9914.31770.1
Unique NamemRNA_Ecto-sp8_S_contig9914.31770.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: D7G5A2_ECTSI (Probable chromatin remodelling complex ATPase chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A2_ECTSI)

HSP 1 Score: 990 bits (2560), Expect = 0.000e+0
Identity = 594/627 (94.74%), Postives = 600/627 (95.69%), Query Frame = 1 
Query:    1 IQDRGTKIPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKEAKREMEDRGALEKDEAAAAREDEEFKLRIRAADNMLGTAERELAEAESNKRNLEMIAEAIKSGTVSLDNPNVRSLLESCASNGIGTTGLNTKNAVKKSAEGVAGAGAGGRKSPGVGGKXSASPXXGGQKKAVASKAAVPGNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KGKGNAVAGKKADTTSSDGKGKVDAGKGGVKSPKAASSTSNAVDKSPANSSGTKAKRTPTKSVGKPGLEVPKTLFPELVRLLEKGDLTSKDDMLQIFQKKHPAFTQVSINKAIGVLGEKVSRGSKWKVLDAGKKYLSMPVYQGNVPEEVAVLSALSAKRKSGGSESHSAKKRKSTTPSKAKGESKSPKPITNFFPPKTSGAADANXXXXXXXXXXXXXAPAPASPKS 1878
            ++DRGTKIPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGE FWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNEL EAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKEAKREMEDRGALEKDEAAAAREDEEFKLRIRAADNMLGTAERELAEAESNKRNLEMIAEAIKSGTVSLDNPNVRSLLESCASNGIGTTGLNTKNAVKKSAEGVAGAGAGGRKSPGVGGKXSASP X                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGKGNAVAGKKADTTSSDGKGKVDAGKGGVKSPKA+SSTSNAVDKSPANSSGTKAKRTPTKSVGKPGLEVPKTLFPELVRL+EKG+LTSKDDMLQIFQKKHPAFTQVSINKAIGVLGEK SRGSKWKVLDAGKKYLSMPVYQGNVPEEVAVLSALSAKRKSGGSESHSAKKRKSTTPSKA GESKSP  ITNFFPPKTSGAADA XXXXXXXXXXXX APAPA+PKS
Sbjct:  883 LKDRGTKIPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEVFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELMEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKEAKREMEDRGALEKDEAAAAREDEEFKLRIRAADNMLGTAERELAEAESNKRNLEMIAEAIKSGTVSLDNPNVRSLLESCASNGIGTTGLNTKNAVKKSAEGVAGAGAGGRKSPGVGGKXSASPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKGNAVAGKKADTTSSDGKGKVDAGKGGVKSPKASSSTSNAVDKSPANSSGTKAKRTPTKSVGKPGLEVPKTLFPELVRLIEKGELTSKDDMLQIFQKKHPAFTQVSINKAIGVLGEKASRGSKWKVLDAGKKYLSMPVYQGNVPEEVAVLSALSAKRKSGGSESHSAKKRKSTTPSKANGESKSP--ITNFFPPKTSGAADAXXXXXXXXXXXXXKAPAPAAPKS 1507
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.290e-34
Identity = 84/219 (38.36%), Postives = 123/219 (56.16%), Query Frame = 1 
Query:    1 IQDRGTKIPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQ 657
            I +RG + P  G     ++L  +  +E+ +L+A GF  WT+ H+ +F+   A +GR   E +A  VG+P EE  RY +AFW +G        W RI  ++E  EKRL E+ R+   T +L    +DPW  +  R    QG          R +   EDR+LLCLTHL G+G+W +VR  +    RF FD+YL+S S  ALGK CE LM+S+E+ L +++
Sbjct:  590 IAERG-EAPQAGNIGKFVVLPPELHEEKTQLVAAGFGDWTKVHFNNFVRASAKHGRSEFEKIAKDVGRPVEETKRYSQAFWERGAAELPAADWERITKQIEKGEKRLEEIGRLTSATAKLITMFEDPWEELTFRNVGNQG----------RIFNAVEDRFLLCLTHLHGYGSWDQVRNSVRRCERFRFDFYLQSCSADALGKRCELLMRSAERELLEIE 797
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.050e-31
Identity = 74/189 (39.15%), Postives = 103/189 (54.50%), Query Frame = 1 
Query:   73 VKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK 639
            + E+  L+++GF  W++  Y  F+   A +GR   + +A  VGK  ++V RY +AFW +G   F+   W R    VE  E+++ E+NR+M  T        +PW  +  +    QG    A           EDRYLLCL H  G+GNW  V+A I  S RF FDY+LRS S  ALGK CE LMK++EK
Sbjct:  912 LSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDVERYAKAFWEKGSTAFAPADWERHVKNVEKGERKIEEINRLMGATRSFISKFANPWEQLTFQYTGTQGKVFNA----------HEDRYLLCLAHKYGYGNWDLVKAAIRRSDRFRFDYFLRSCSADALGKRCEALMKAAEK 1090
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A448Z774_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z774_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.410e-26
Identity = 73/209 (34.93%), Postives = 112/209 (53.59%), Query Frame = 1 
Query:   55 LLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQ-GPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNME-VRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKE 675
            LLS +  KE+  L+ +GF GW+R +Y SFI   A Y R     +A+ VGK   +VV Y  AFW + G + FSE  + R+   V   EK+L ++  +           D+PW  +E   +N +            + ++ D DRYLLC TH  G G W  ++  I  SP+F FDY+ RSL    +G+ CE LMK++ K ++ L+ +M+++
Sbjct:  512 LLSEEVQKEKDSLLKEGFLGWSRVNYTSFIKASAKYSRSDFAKIASEVGKTEAQVVEYSTAFWGEIGKERFSEHEYTRVSNLVAKGEKKLVDMKALRQSLKVFISLFDNPWEKLEFTHVNTK-----------DKLFSADNDRYLLCWTHKYGIGQWDAIKMAIRRSPQFRFDYFFRSLPVDVIGRRCETLMKATLKEVELLEKKMRED 709
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A448Z643_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z643_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.780e-26
Identity = 73/209 (34.93%), Postives = 112/209 (53.59%), Query Frame = 1 
Query:   55 LLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQ-GPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNME-VRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKE 675
            LLS +  KE+  L+ +GF GW+R +Y SFI   A Y R     +A+ VGK   +VV Y  AFW + G + FSE  + R+   V   EK+L ++  +           D+PW  +E   +N +            + ++ D DRYLLC TH  G G W  ++  I  SP+F FDY+ RSL    +G+ CE LMK++ K ++ L+ +M+++
Sbjct: 1003 LLSEEVQKEKDSLLKEGFLGWSRVNYTSFIKASAKYSRSDFAKIASEVGKTEAQVVEYSTAFWGEIGKERFSEHEYTRVSNLVAKGEKKLVDMKALRQSLKVFISLFDNPWEKLEFTHVNTK-----------DKLFSADNDRYLLCWTHKYGIGQWDAIKMAIRRSPQFRFDYFFRSLPVDVIGRRCETLMKATLKEVELLEKKMRED 1200
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A7S4ACA6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACA6_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.300e-25
Identity = 71/209 (33.97%), Postives = 114/209 (54.55%), Query Frame = 1 
Query:   55 LLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQ-GPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEV-RINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKE 675
            LLS +  KE+  L+ +GF GW+R +Y S+I   A YGR  +  VA+ VGK   +VV +  AFW + G + FSE  + R+   V   EK+L ++  +           D+PW  ++   +N +            + ++ D DRYLLC TH  G G W  ++  I  SP+F FDY+ R L    +G+ CE LMK++ K ++ L+++M+++
Sbjct:  884 LLSEEVQKEKDALLKEGFLGWSRVNYTSYIKASAKYGRSDIAKVASEVGKSEAQVVEFSNAFWGETGKERFSEHEYNRVSNLVAKGEKKLIDMKALRKGLKVFISLFDNPWEKLDFPHVNTK-----------DKLFSADNDRYLLCWTHKYGIGQWGAIKMAIRRSPQFRFDYFFRCLPVDIIGRRCETLMKAALKEVELLENKMRED 1081
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A484E1D8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1D8_BRELC)

HSP 1 Score: 123 bits (308), Expect = 2.360e-25
Identity = 70/206 (33.98%), Postives = 117/206 (56.80%), Query Frame = 1 
Query:   58 LSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKE 675
            L+ ++ KE+ +L+++GF  W +  ++ ++  +A +GR+ +E VA  + KP EE+ RY + F  +G +  S+  W +I   +E  E +L E+ R+   T    +   +PW +M +     QG  G       + +T++EDR LLCL +L G+G W +++  I    RF FDYYLRS +   +G+ C+ LM+  EK   DL+ R KKE
Sbjct:  931 LTEEEFKEKKQLLSEGFSDWNKPQFFLYVKLLARHGRENIEAVARELMKPVEEIKRYSKVFLARGQEELSD--WPKILKSIEKGESKLLEIERLTEETACKVKRYANPWEDMPINY---QGKGG-------KVFTEEEDRALLCLVNLFGYGAWDRIKQEICNIERFAFDYYLRSRTAAEIGRRCDSLMRICEKDNADLEHREKKE 1124
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A3M6VFE9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFE9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.510e-25
Identity = 81/260 (31.15%), Postives = 136/260 (52.31%), Query Frame = 1 
Query:   58 LSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKEAKRE---MEDRGALEKDEAAAAREDEEFKLRIRAADNMLGTAERELAEAESNKR 828
            L+ +++KE+ +L+ +GF  W +  ++ FI  +A YGR  +E VA  + KP EE+  Y + F  +G    S+  W +I   +E  E +L E+ R+   T    +   +PW +M +     QG  G       + +T++EDR LLCL +  G+G W +++  I +   F FDYYLRS +   +G+ C+ LM+  EK   DL+ R KKE        E R  L++  AAA  + ++ + R+   D ++    + + +   NKR
Sbjct:  934 LTDEELKEKEQLLTEGFSDWNKPQFFLFIKLLARYGRGNIEAVAREMMKPLEEIEEYSKIFLARGQDELSD--WHKIMKSIEKGESKLLEIERLTEETTRKVKRYANPWEDMPINY---QGKGG-------KVFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFAFDYYLRSRTAAEIGRRCDSLMRICEKDNADLELREKKENDVRHVLQEQRAKLDQQLAAARADVKQHQARV---DELIMKEAKRMQKQRENKR 1178
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: A0A0P1A5Y5_PLAHL (Chromatin-remodeling complex atpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5Y5_PLAHL)

HSP 1 Score: 119 bits (299), Expect = 3.010e-24
Identity = 69/206 (33.50%), Postives = 114/206 (55.34%), Query Frame = 1 
Query:   58 LSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDRMKKE 675
            L+ ++++E+ +L+++GF  W +  ++ FI  +A YGR  +E VA  + +P  E+ +Y + F  +G    S+  W +I   +E  E +L E+ R+   T    E   +PW +M +     QG  G       + +T++EDR LLCL +L G+G W +++  I     F FDYYLRS +   +G+ C+ LM+  EK   DL+ R KKE
Sbjct:  933 LTEEELQEKKQLLSEGFSNWNKPQFFLFIKLLARYGRGNIEAVAREMMRPLNEIEQYSKVFLTRGQSELSD--WPKIIKSIEKGESKLLEIERLTEETARKVERYANPWEDMPINY---QGKGG-------KVFTEEEDRVLLCLVNLFGYGAWDRIKQEICNMEMFAFDYYLRSRTAAEIGRRCDSLMRICEKDNADLELREKKE 1126
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BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Match: UPI00053CA22F (ISWI chromatin-remodeling complex ATPase CHR11-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA22F)

HSP 1 Score: 108 bits (270), Expect = 1.600e-22
Identity = 64/215 (29.77%), Postives = 119/215 (55.35%), Query Frame = 1 
Query:   22 IPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDGMAVYGRDRLELVAT-MVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRVETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQREWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEKYLQDLQDR 663
            I VD  +     L+A++V+E+  L+ +GF  W+R  + +F+     YGR+ ++ +AT M GK  EEV RY +AF ++  K  ++  + RI   +E  E R++  + IM    +  +   +PW  ++V+  Q +G          + + +D DR+++C+ H  G+GNW +++A    SP F FD++++S +   L + C+ L++  EK  Q+  +R
Sbjct:   40 IDVDEPEEGGDPLTAEEVEEKERLLEEGFSTWSRRDFNTFLRACEKYGRNDIKSIATEMEGKTEEEVERYAKAF-KERYKELND--YDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKVQYGQNKG----------KLYNEDCDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDER 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9914.31770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5A2_ECTSI0.000e+094.74Probable chromatin remodelling complex ATPase chai... [more]
A0A7S3HIT7_9STRA2.290e-3438.36Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D7FV68_ECTSI2.050e-3139.15Probable chromatin remodelling complex ATPase chai... [more]
A0A448Z774_9STRA1.410e-2634.93Uncharacterized protein (Fragment) n=1 Tax=Pseudo-... [more]
A0A448Z643_9STRA1.780e-2634.93Uncharacterized protein (Fragment) n=1 Tax=Pseudo-... [more]
A0A7S4ACA6_9STRA1.300e-2533.97Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A484E1D8_BRELC2.360e-2533.98Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3M6VFE9_9STRA5.510e-2531.15Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A0P1A5Y5_PLAHL3.010e-2433.50Chromatin-remodeling complex atpase n=1 Tax=Plasmo... [more]
UPI00053CA22F1.600e-2229.77ISWI chromatin-remodeling complex ATPase CHR11-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9914contigEcto-sp8_S_contig9914:455..7053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score1003.0
Seed ortholog evalue6e-290
Seed eggNOG ortholog2880.D7G5A2
Model size1878
KEGG koko:K11654
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG0385@2759
Ec32 ortholog descriptionHigh mobility group, SNF2 and SLIDE domain protein
Ec32 orthologEc-14_006770.1
Cds size1878
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9914.31770.1prot_Ecto-sp8_S_contig9914.31770.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9914 455..7053 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145360.4283547-CDS-Ecto-sp8_S_contig9914:454..6491681145360.4283547-CDS-Ecto-sp8_S_contig9914:454..649Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 455..649 +
1681145360.444647-CDS-Ecto-sp8_S_contig9914:1216..13481681145360.444647-CDS-Ecto-sp8_S_contig9914:1216..1348Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 1217..1348 +
1681145360.4567292-CDS-Ecto-sp8_S_contig9914:1815..19881681145360.4567292-CDS-Ecto-sp8_S_contig9914:1815..1988Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 1816..1988 +
1681145360.4691367-CDS-Ecto-sp8_S_contig9914:2567..27151681145360.4691367-CDS-Ecto-sp8_S_contig9914:2567..2715Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 2568..2715 +
1681145360.4811635-CDS-Ecto-sp8_S_contig9914:3439..35441681145360.4811635-CDS-Ecto-sp8_S_contig9914:3439..3544Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 3440..3544 +
1681145360.4935555-CDS-Ecto-sp8_S_contig9914:4126..42101681145360.4935555-CDS-Ecto-sp8_S_contig9914:4126..4210Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 4127..4210 +
1681145360.5091298-CDS-Ecto-sp8_S_contig9914:4623..52391681145360.5091298-CDS-Ecto-sp8_S_contig9914:4623..5239Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 4624..5239 +
1681145360.5212662-CDS-Ecto-sp8_S_contig9914:5640..57251681145360.5212662-CDS-Ecto-sp8_S_contig9914:5640..5725Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 5641..5725 +
1681145360.5331397-CDS-Ecto-sp8_S_contig9914:6015..61181681145360.5331397-CDS-Ecto-sp8_S_contig9914:6015..6118Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 6016..6118 +
1681145360.5515437-CDS-Ecto-sp8_S_contig9914:6459..65341681145360.5515437-CDS-Ecto-sp8_S_contig9914:6459..6534Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 6460..6534 +
1681145360.5655365-CDS-Ecto-sp8_S_contig9914:6891..70531681145360.5655365-CDS-Ecto-sp8_S_contig9914:6891..7053Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9914 6892..7053 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9914.31770.1

>prot_Ecto-sp8_S_contig9914.31770.1 ID=prot_Ecto-sp8_S_contig9914.31770.1|Name=mRNA_Ecto-sp8_S_contig9914.31770.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=626bp
IQDRGTKIPVDGADIASMLLSADKVKERAELIAQGFPGWTRGHYYSFIDG
MAVYGRDRLELVATMVGKPAEEVVRYGEAFWRQGPKTFSEEAWRRIKTRV
ETKEKRLNELNRIMMVTNELTEAVDDPWRNMEVRINQRQGGAGTAGMQLQ
REWTKDEDRYLLCLTHLCGWGNWRKVRACILASPRFTFDYYLRSLSETAL
GKHCEQLMKSSEKYLQDLQDRMKKEAKREMEDRGALEKDEAAAAREDEEF
KLRIRAADNMLGTAERELAEAESNKRNLEMIAEAIKSGTVSLDNPNVRSL
LESCASNGIGTTGLNTKNAVKKSAEGVAGAGAGGRKSPGVGGKKSASPGG
GGQKKAVASKAAVPGNTGNGGGKKTSAASSGTPAAAANGDAKKSGGGGGK
GKGNAVAGKKADTTSSDGKGKVDAGKGGVKSPKAASSTSNAVDKSPANSS
GTKAKRTPTKSVGKPGLEVPKTLFPELVRLLEKGDLTSKDDMLQIFQKKH
PAFTQVSINKAIGVLGEKVSRGSKWKVLDAGKKYLSMPVYQGNVPEEVAV
LSALSAKRKSGGSESHSAKKRKSTTPSKAKGESKSPKPITNFFPPKTSGA
ADANGGGGGSAPSKKRKAPAPASPKS
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mRNA from alignment at Ecto-sp8_S_contig9914:455..7053+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9914.31770.1 ID=mRNA_Ecto-sp8_S_contig9914.31770.1|Name=mRNA_Ecto-sp8_S_contig9914.31770.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6599bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9914:455..7053+ (Ectocarpus species8 EcLAC_412)
ATCCAGGACCGGGGAACGAAGATACCAGTGGACGGGGCTGACATCGCGAG
CATGCTGCTGTCGGCGGACAAGGTGAAGGAGCGAGCGGAGCTGATCGCTC
AAGGCTTCCCGGGCTGGACCCGAGGGCACTACTACAGCTTTATCGACGGG
ATGGCGGTGTACGGGAGGGACCGCCTCGAGCTTGTGGCGACCATGGTGAG
AGAGGAGGGGCACAGGCAGGAGAAGGGAAGAGAGGGAGAGAAGCGAGAAA
TAGTAAGGGGCGAGTAGGGGGAGGGAAAGAAATCGCACTCGTTCCCGTTC
AATTGCTGCAGCGGGGCTGAGGCGGACTTGTGTCACGCGAGGCTAATGCC
TGACGTGCTTCAGATTGTTGATTTATTTCATTGATATATGTCAGTGATGC
GATCCACGGAAACAGCAGTCAACCACGCCTGGTTGGTGCAGAGCGATTTC
CCTGCTGCCGGGTGGTTAACGTGCGACCTTTCACCTTCGACCGCAACTCC
GACTCCGACTCTGTATGTTGGTATGTTGGTGTGCGTGCTGCCACGGATCG
GGCTTGCAAGCTCCTACGGTGTAGTCTTGTTTGCCGTTTGTTCATGTCGA
GGTCCCTGGAGGATCCTCCCTTTCGATGCGGTACAGTGTTAATAGCGATA
TACCCCCCGTCCAAGCCGTATTCAATGTACCCCCGACGCATCTACTCAGC
AGTGCTTATGCTTGGTTGTACCGCTGTGACATTTGTGAGTTGTGTTGTGT
TGTGTTGTCAAGGTGGGCAAGCCGGCGGAAGAGGTGGTGCGGTACGGAGA
GGCGTTCTGGAGGCAAGGACCAAAGACCTTCTCGGAGGAGGCGTGGAGAC
GCATCAAGACACGCGTAGAGACCAAGGAGAAGAGGCTCAACGAGGTGAGG
CGCCGAAACCGACCCATCCGTAGCGTGCCCTACCGCCATCATGTCCCACC
ACTCAACACTCAACGCTAACATGGGGGAGCACAGGAACGCAGACCAAAGA
AGCGGTGTACTTTTGCCGAGAAGTTAGAGTCATCGTTGGTGCGATTCTAT
TGATAGCAAGCACTGTTGGATGAGCTCGGCGTCGGTTGGTGCTTAATCGA
TCGGCGTTGGTGCTGCAATAGTCTGAAGGGCTTGCCGACAAGTTGGCGAC
CCGATCGATCGCCTGCCACGAACATGTCGTTAGTGTCGTATGCCATGCAT
TGCAAAGCTAGCTCGTCATCTCGGTACCTGTTGTCTCTCGCGCGCTGTTT
AAGAGCCTCTCTCCGCCGCCGCTGGTTGCTACCCACACACACCTTGCTCA
TGTTTTGATCCTGCTGTTTTTCCTGTGGTTGTTGTATGTTTGCAATGTGC
AACCGCCACAGTTGAACAGGATCATGATGGTGACCAACGAGCTCACGGAG
GCAGTCGACGACCCCTGGAGGAACATGGAGGTGCGCATCAACCAGAGACA
GGGCGGGGCCGGAACGGCAGGAATGCAGCTGCAGCGCGAGTGGACTAAGG
ACGAAGACCGCTACCTGCTGTGCCTCACGCACTTGTGAGTGTCAGTCTCA
GTCTCAGTCTCAGTCTCAGTCACTGTCACAAGTGTTGGTCGTATGGAGAC
CCCTTGTTCTCTCTGTGACGCCGGCTATAGTACATGTAGACAGACAGACA
GCCTACGACACGGGCCCTTCAGCCCCCACGGCTCATGAAGCAGTCTTTTT
AGCAGTCTTTTTTGTAGTCTTGCTTTCGGTGTTTTTGTCTTTTTCGATCA
CTGTTACCATCTCTGGCCGGCAAAGGCACCCATTGCGAAGTCTTGCTACG
ATACGTGCGGTTTCGTGCATATCTGTGCCTGCCCCCCCCCCCCTGCCCCC
ACTGTGTTTCCCGTGTACCTGACGGGCTGTTGTCCCACGGAAAATTGTGT
GTGACTGCTTTCGGGTTCTTGTTTTCATTTCTTTACTTTGTGGAAAGTAT
ACACATAATCTAATCTAATCACTGAACGACTTGCCCGTTGGAGAAAATAC
CACCGTCGAAGGGAAGGGGGTGCGTTGAAACGATTTTTTTTCTTTGCCGG
GAGTTGTTTTCTCACGGCGGTTGGTGACGTACGTCATTGTGGCATTGTGG
CACATACCGGCAGGTGCGGGTGGGGCAACTGGCGCAAGGTAAGGGCGTGC
ATCCTGGCCTCCCCCCGCTTCACGTTCGACTACTACCTGCGCTCGCTGTC
CGAGACCGCTTTAGGGAAGCACTGCGAGCAGCTCATGAAGTCCTCGGAGA
AGTATCTGCAGGTGAGATGTTGCTTTCACGGCGATGGGTCCCTCTTGCCT
CTTGCCTCTTATCTCTTGCCTCTTGCCTCTTGCCTCTTGCCTGTCTGTTG
CCTCCTCTTGGGTCTTGCCTCTTGCCTCCTCTTGGGTCTTGGCTGATTGG
GGTCTTGGCGTTTTCCGCCAGCCAGAGTCCCTCCGCTATCTATTGTTCGT
CCGTGACCGGGTTGATCGGTGTTGTGTACCTCTTTTTGCCTTGTTCTAGT
ACCTGTTTTCGTGGCTACTCCGTCGCCTGCGGCATGTGCCAATTTTTCCG
ATTTTCCTCCGCAAAACAAGAAATTGGGGTTGAAAAACACGGCTAGCTCA
CCTGTAGCTTCTACTACACCGTTATGGTCTGGTGCAGTAGTCTATTCTCG
GCGGTGGCGACGAACTAATGTAGCGAAATAACGAACTGAACCTCTACCCG
ATATTGACATGTTGACGTTTAAGCTTCTTAAAGAGCGATCGGGTACTCTG
TGCAGCAGTTTGTTTTTGTCTAGTACACCGATTTTCTGTGTTTTACTCCT
GTGCCATGAAGAATGAAAAGAAAAGGAGGCGTTTTGGTCTTTTCGGCCTG
TCTGGTCTTGGTCTTACTGTAGAACCAAGATCAACGGTATCGATTCTCGT
TCTTTTTTTTCTTTCTGCTTAACTTAGTTGGGGGTGCCGTGGTTTCATTG
CATGTGTATACTGTATGTGTTGTGTTGCCGTGCAGGACCTGCAAGACCGC
ATGAAGAAGGAAGCCAAGAGGGAGATGGAGGACCGCGGGGCGCTGGAGAA
GGACGAGGCCGCCGCGGCAAGGGAAGACGAAGAATTCAAGGTGCACGCTC
GCATCACACCCCTCTCTCACCCTCACCTCACTGAGCTTGGGGCGGTGCTT
TGCTTGTCGAGATTTTTGGCACAGCGAAGTGGTGTGGGGGTGGTTTGCCG
ATGAATGTGGTACAGTGTCATGATGTCGGAGCCTACTTTCGTGGTTCGGC
GTTTTTCGTATCGGCGTTTGATGATGTTGTTTGCACAGCTCGAACACTTT
CTGATCTCCAGACCTCTATATGTCACCTCTTCTCCCACACTTGGAAAGTG
TGCGTAGTTCTTTCTCTCCTTGTCCTCTGTCGAGGTAAAAAAAAAACCAC
GAGTTGAGTTCGTGACAGATTGATTGATTGATCCCCTCTCCTCAACCCTG
ATGCGAAAAACGCCCGCTGTCGTCGCTTTTTTTGCGCACGAAACTCTCGG
TGCAGCCATCTCAGTCTACCGTACTCATTCCAATGGATGACGAAAACACA
TGTGCAGATTTTGGTTTCACTGATTCCTGTGGCTGTTACCGGTGATTGTT
GGACGATTGGCGTTTTCTAGATCTGACGGCCGCCTTTTTTTGGGCTCTCG
TTTTTTTTGTGTTGTTTTTCAGCTTCGCATCCGGGCTGCGGACAACATGC
TCGGTACGGCAGAAAGAGAGTTGGCGGAGGCCGAGAGCAACAAGCGGAAC
TTGGAGGTAAACATGACTGACGGTGTTGAATAGCTGTGGTGGATTGACTA
CTAATATGCTACATTGTACTTCATGAGTAAAACAGTCCCGCGTTGTGGTC
GAACGTGTCCGGCGGAGAAGTTTTAATAGTACAACAGCATATCACCGATT
GGAGAAGCAAGGCCTGGAGGTTTGTACTTGCGGTTCTGAGACCGCCATCG
TCTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGGGCTTGGCCTC
CGGTGAAAGTTGTGCATTTTAATTTTGTCCGGTTGTTTGAGAAAGTATGA
AGTGCATGCTTGTTGGTCTTGGTCTCAACGCCCTCTAGCGAACTACTATA
ATAGCTATGAACCAGAACCACATTTGTTTCATTGGTTCCTTGTGCAATTT
CGCCTTGCTACGGCATCAGATGATCGCGGAAGCAATCAAATCCGGAACGG
TTTCCCTGGACAACCCGAACGTGAGGAGCCTCCTCGAGTCCTGCGCCTCC
AACGGGATCGGCACGACCGGTCTCAACACCAAGAACGCCGTAAAGAAGTC
AGCAGAAGGGGTGGCAGGGGCAGGAGCAGGAGGCCGCAAGTCTCCGGGAG
TAGGGGGTAAGAAGTCCGCATCTCCCGGGGGAGGTGGCCAGAAGAAGGCC
GTGGCGTCGAAGGCGGCGGTGCCTGGCAACACCGGAAACGGCGGCGGCAA
GAAAACAAGCGCCGCTAGTTCTGGAACTCCCGCCGCCGCTGCCAACGGGG
ACGCCAAGAAGAGCGGTGGCGGGGGGGGGAAAGGGAAGGGCAACGCCGTC
GCGGGGAAGAAGGCGGACACGACCTCTTCGGACGGGAAGGGGAAGGTTGA
TGCGGGAAAAGGCGGGGTCAAGAGCCCCAAGGCTGCTTCTTCCACGAGTA
ACGCGGTTGACAAGTCGCCTGCCAATTCCTCGGGCACCAAGGCCAAGCGG
ACGCCGACCAAGTCGGTGGGGAAGCCGGGGCTCGAGGTTCCGAAGACGCT
GTTCCCGGAGTTGGTGCGGCTGCTCGAGAAGGGAGGTGGGTTGGAGTGAG
AATCTCAGGCTGTCTTGGCGTTGGTTGATGGTACGACTGGTGCTGGGTCG
AGTTGTTCTGTTGGCCTTGTCCGGCAGGCATGAGAGCGCGTGGAAGACGG
GTCGTGTTTCGTGCGCGTGTCGCGCGCTACTGCTGCTCTAGTCAGTCTGG
CTTTTGTGGTATCTCCGCTCGGTGTGTCGGGTGAGACCTCGAGCGTTTGG
AACCGAAATGGAGGGGAGCACGGTTTACTTGTACGGTAGGAGTGTCGCAA
GACATGCGGCTAAAGGCTTAATTTAATGACTTGTTGTCCCGGAATTCCTT
GCTGTAGAGTGATAAACCCCCACCCCAATCCTTGTGCTGATACCGAAAAC
TCTTGATGCTTTTATCTTGACGGTGCTACAATGCAGATTTGACTTCCAAG
GACGATATGCTGCAGATCTTCCAGAAGAAGCACCCAGCCTTCACCCAAGT
GTCGATCAACAAGGCGATCGGGTGAGAGCGATACACTATTATTGTGTAAA
TGAACGGTTGTGTTTCAAGTAGCGTTCGTTTTTTCTTCAATGGAAGGGGC
ATGGAAGGAGCAAGCATTACCGAGAGATCCCCCAAGTGTTGTGGGCCATT
TGTACATGGAGTTTACTTTACATGTGCCACGGTGCCCGTAGCTTTATAGC
TTTAGGAGGGAATCGTCGGCAGGCTGAATGTTACGTCTCCATCCCTTCCT
TGCTCCGGCGATGATATAATTGTTACAATAAATTACTTGTCCCCCCGGTT
TTGCGCTGCAGGGTGCTGGGAGAGAAGGTGTCTCGCGGCTCGAAGTGGAA
GGTTTTGGACGCTGGGAAAAAGTACCTGAGCATGCCTGTCTACCAGGGGA
ACGTGCCCGAAGAGGTACGTACATGTCATTCTTTGCATATCAGTCATTCC
TTTGCAATCAGTCATTCCTAAAGTCATTACTTTGCATATCGTACGTGTGT
TTCTGTTTTCGCGTATTTCTGGAGACGCACACGTCTTCTCTTCTTCCCGT
CTCACGGAAGTAGTATGGTACGGTACGGTATGGTGTGTGTGGCCTACCCT
GCTACCCTGCTACCCTATGTTGTTGCTCGGCCGAACCTGCTGCTTGACTC
TGGGTTACTTTTGAGCCTTCTCTGACGCGGCTGGTGCATGTTTGCGTTTC
AATTGGTGGATGTGGGTGGGTTTCGCCTGTGTGTCAACGTGGGCGGGCCC
AACAGGTGGCGGTCCTCTCTGCGTTGTCGGCGAAACGGAAGAGCGGTGGT
TCGGAGTCACATTCGGCAAAGAAACGCAAGGTGCGATTGATCGATTGGTT
GATTGTGTGCAGCAGACAGCAGTGCTGGTACACGGGCGTTATTTCCTGAA
CACAGAAGCGTTTGTGGCCTCATGGTGACAATTTCGGGTGAGTGAACGTT
CACAAGTATCAGATTGCCATCCCAATTCAACGAGAGCGAAGGCGCAGAAT
GTTTTTCAAGAATACCGCGCTATTTGCCTCGGATATGGGGGCGGCGGGCG
CAAACAATCGAGGCTTTCGTCTCGTCTCACTGTCGTTTGTCATTTGGCAT
GATGTGTTTGCTTATTGTCGCTTGCTCGATTTTTCTCACGTTCCTTGCCT
CCCGCCACCTCTGCGCGGAACTCATGCTGCACCGCAGTCAACCACGCCCA
GCAAGGCCAAGGGCGAGTCTAAGAGTCCCAAGCCCATCACAAACTTCTTC
CCACCCAAGACATCGGGGGCGGCCGACGCCAACGGGGGGGGGGGGGGCTC
CGCACCTAGCAAGAAACGCAAGGCGCCAGCACCGGCATCACCCAAGAGC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9914:455..7053+

>mRNA_Ecto-sp8_S_contig9914.31770.1 ID=mRNA_Ecto-sp8_S_contig9914.31770.1|Name=mRNA_Ecto-sp8_S_contig9914.31770.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1878bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9914:455..7053+ (Ectocarpus species8 EcLAC_412)
ATCCAGGACCGGGGAACGAAGATACCAGTGGACGGGGCTGACATCGCGAG
CATGCTGCTGTCGGCGGACAAGGTGAAGGAGCGAGCGGAGCTGATCGCTC
AAGGCTTCCCGGGCTGGACCCGAGGGCACTACTACAGCTTTATCGACGGG
ATGGCGGTGTACGGGAGGGACCGCCTCGAGCTTGTGGCGACCATGGTGGG
CAAGCCGGCGGAAGAGGTGGTGCGGTACGGAGAGGCGTTCTGGAGGCAAG
GACCAAAGACCTTCTCGGAGGAGGCGTGGAGACGCATCAAGACACGCGTA
GAGACCAAGGAGAAGAGGCTCAACGAGTTGAACAGGATCATGATGGTGAC
CAACGAGCTCACGGAGGCAGTCGACGACCCCTGGAGGAACATGGAGGTGC
GCATCAACCAGAGACAGGGCGGGGCCGGAACGGCAGGAATGCAGCTGCAG
CGCGAGTGGACTAAGGACGAAGACCGCTACCTGCTGTGCCTCACGCACTT
GTGCGGGTGGGGCAACTGGCGCAAGGTAAGGGCGTGCATCCTGGCCTCCC
CCCGCTTCACGTTCGACTACTACCTGCGCTCGCTGTCCGAGACCGCTTTA
GGGAAGCACTGCGAGCAGCTCATGAAGTCCTCGGAGAAGTATCTGCAGGA
CCTGCAAGACCGCATGAAGAAGGAAGCCAAGAGGGAGATGGAGGACCGCG
GGGCGCTGGAGAAGGACGAGGCCGCCGCGGCAAGGGAAGACGAAGAATTC
AAGCTTCGCATCCGGGCTGCGGACAACATGCTCGGTACGGCAGAAAGAGA
GTTGGCGGAGGCCGAGAGCAACAAGCGGAACTTGGAGATGATCGCGGAAG
CAATCAAATCCGGAACGGTTTCCCTGGACAACCCGAACGTGAGGAGCCTC
CTCGAGTCCTGCGCCTCCAACGGGATCGGCACGACCGGTCTCAACACCAA
GAACGCCGTAAAGAAGTCAGCAGAAGGGGTGGCAGGGGCAGGAGCAGGAG
GCCGCAAGTCTCCGGGAGTAGGGGGTAAGAAGTCCGCATCTCCCGGGGGA
GGTGGCCAGAAGAAGGCCGTGGCGTCGAAGGCGGCGGTGCCTGGCAACAC
CGGAAACGGCGGCGGCAAGAAAACAAGCGCCGCTAGTTCTGGAACTCCCG
CCGCCGCTGCCAACGGGGACGCCAAGAAGAGCGGTGGCGGGGGGGGGAAA
GGGAAGGGCAACGCCGTCGCGGGGAAGAAGGCGGACACGACCTCTTCGGA
CGGGAAGGGGAAGGTTGATGCGGGAAAAGGCGGGGTCAAGAGCCCCAAGG
CTGCTTCTTCCACGAGTAACGCGGTTGACAAGTCGCCTGCCAATTCCTCG
GGCACCAAGGCCAAGCGGACGCCGACCAAGTCGGTGGGGAAGCCGGGGCT
CGAGGTTCCGAAGACGCTGTTCCCGGAGTTGGTGCGGCTGCTCGAGAAGG
GAGATTTGACTTCCAAGGACGATATGCTGCAGATCTTCCAGAAGAAGCAC
CCAGCCTTCACCCAAGTGTCGATCAACAAGGCGATCGGGGTGCTGGGAGA
GAAGGTGTCTCGCGGCTCGAAGTGGAAGGTTTTGGACGCTGGGAAAAAGT
ACCTGAGCATGCCTGTCTACCAGGGGAACGTGCCCGAAGAGGTGGCGGTC
CTCTCTGCGTTGTCGGCGAAACGGAAGAGCGGTGGTTCGGAGTCACATTC
GGCAAAGAAACGCAAGTCAACCACGCCCAGCAAGGCCAAGGGCGAGTCTA
AGAGTCCCAAGCCCATCACAAACTTCTTCCCACCCAAGACATCGGGGGCG
GCCGACGCCAACGGGGGGGGGGGGGGCTCCGCACCTAGCAAGAAACGCAA
GGCGCCAGCACCGGCATCACCCAAGAGC
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