mRNA_Ecto-sp8_S_contig9906.31751.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: D7FRJ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRJ7_ECTSI) HSP 1 Score: 774 bits (1999), Expect = 3.220e-277 Identity = 374/394 (94.92%), Postives = 382/394 (96.95%), Query Frame = 2
Query: 2 RRLCACFMIAFALLVTLALLRPPGASPS--LRLVEGVDWQNAPRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGMNIITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTGDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDDKDVFTLNDDMYENMCLGSNNEAGNCQRRPPAENDGHAQTLKWSVGSTTWGDTYKDHSRRVSRAGSAFQWRGEEDEDWVHVGGQ 1177
RR CACF+ AFALLV+LALLRPPGASPS LRLVEGVDWQNAPRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDS DHR+GTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFY DLYTDADY+GIIDTDAAFISPVVPSDLFDEGKPILRGMNIITQWQSET+RKA GGFPYV RFMTRIAFPIIIKSEHFSQMR+VI ENLGAETFEEAFK ICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRD GDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDDKDVFTLNDDMYEN+CLGSNNEAGNCQRRPPA+NDGHAQTLKWSVGSTTWGDTYKDHSRRVSRAGSAFQWRGEEDEDWVHVGGQ
Sbjct: 14 RRWCACFIFAFALLVSLALLRPPGASPSPSLRLVEGVDWQNAPRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSAFDHRIGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYADLYTDADYMGIIDTDAAFISPVVPSDLFDEGKPILRGMNIITQWQSETSRKATGGFPYVGRFMTRIAFPIIIKSEHFSQMRQVIAENLGAETFEEAFKVICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDNGDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDDKDVFTLNDDMYENVCLGSNNEAGNCQRRPPAQNDGHAQTLKWSVGSTTWGDTYKDHSRRVSRAGSAFQWRGEEDEDWVHVGGQ 407
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A6H5K9S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S0_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.030e-78 Identity = 132/232 (56.90%), Postives = 163/232 (70.26%), Query Frame = 2
Query: 479 VVPSDLFDEG-KPILRGMNIITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTGDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDDKDVFTLNDDMYENMCLGSNNEAGNCQRRPPAENDGHAQTLKWSVGSTTWGDTYKDHSRRVSRAGSAFQWRGEEDEDWVHVG 1171
VVPSDLFD+ KP ++G+N + W+SE T++A GG V RFMT + FP+I+KS+HF MRR IT NLGA TF EAF ICS G SYSQFEIM+ YLWY HDEYSWHIAD D LN+ G R +D VVA NVP I VMKH K +++ D Y+ +CLGSNN AGNCQ R P+ DG AQT++WSVG+ TW TY++HS ++SRAG AF+WR E +DW+H G
Sbjct: 19 VVPSDLFDDDRKPFIKGVNCGSPWRSEVTKRAIGGVESVGRFMTPMIFPVIVKSDHFDDMRRDITRNLGAATFAEAFHMICSEGANSYSQFEIMVTYLWYNKHDEYSWHIADPANMDAKSLNI-GDKRYYEDDRVVATNVPVIVVMKH--SKIRTSIDSDTYDYLCLGSNNLAGNCQSRVPSPLDGSAQTVQWSVGNQTWMHTYEEHSTKLSRAGKAFRWRRETAQDWIHPG 247
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A3M7T151_BRAPC (Uncharacterized protein n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7T151_BRAPC) HSP 1 Score: 231 bits (588), Expect = 1.530e-64 Identity = 122/302 (40.40%), Postives = 184/302 (60.93%), Query Frame = 2
Query: 116 NAPRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGMN-IITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTGDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDD-----KDVFTLNDDMYENMCLGSNNEAGNC 1003
+P + ++CR Y ++ F+ F ++L+FWP +WK+S +V++LD ++ DHRMG++L ++ KV +E T C+NWR+ GY+R QYSNFY DLYTD +Y+ I+D+D+ F++ V P DLF +GKP + G N T+W + K A G + FM R FPIIIK HF Q+R IT+ + TFEEAF +ICS K YSQF+++++YLWY+ +EYSWH+ +D +F + RA +D + N P I V KH +F + M++ MC+ S+N+AG+C
Sbjct: 84 GSPDVTVLCRAYSGSVMEFYNMFYLSFLIFWPHKTWKNSDMVIVLDSENELDHRMGSVLAHLYPYPKVF--FEKMPQKATFCSNWRNIGYSRTQYSNFYSDLYTDKEYIAIVDSDSYFVAQVTPEDLFVDGKPRIIGYNGCCTRWLNSI--KEALGVDPLGEFMNRGNFPIIIKRNHFKQIRMHITKTMATRTFEEAFHSICSKYKGQYSQFDLLVHYLWYFKRNEYSWHL--KDVLEFGHYRMPKRA-TNDTDVIQMNNKPMISVAKHAGSLLNYPNYMFKI---MFDYMCVASDNQAGSC 375
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A3P3YPH4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPH4_PLABS) HSP 1 Score: 208 bits (529), Expect = 8.280e-57 Identity = 123/298 (41.28%), Postives = 169/298 (56.71%), Query Frame = 2
Query: 122 PRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGMN-IITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHI-ADRDTGDFHGLNLQGRARASDDGSVVAA--NVPAIFVMKHLDDKDVFTLNDDMYENMCLGSNNEAGNC 1003
PR +VCR Y +WQ F+ + +FWP +W +S +VV+LD +S D R+ ++L LP V +E PG LC ++RSEGY RQ YSNF+ D T+AD+VG +D+D FI+PV DLF GKP + N T W S R A GG P V+ FMT +FP I+ HF+ MR I LGA TF++AF IC+ E YSQ+++M +YLWY H D+Y+WH A R F +A SDD V+AA PA+ +MK + D +L + +C+ +N A C
Sbjct: 52 PRFSIVCRMYSGTAPEWWQAFVVGHQLFWP-RAWTNSDVVVVLDAESAHDWRVASVLSR--LPPFPAVVFEAKPGPGVLCASFRSEGYCRQMYSNFFADRQTEADFVGFVDSDTMFITPVAVGDLFVGGKPRVSAYNGCCTGWNSPIER-AIGGKP-VAEFMTSSSFPFIVHRGHFAPMRAHIARTLGAATFDDAFHTICAEYGEQYSQYDLMGHYLWYAHRDDYAWHFRAPRGHDAF-------QAAQSDDADVLAAMQTRPAVSLMKMIGHSDFGSLLTVWSDYVCVAANWTAPGC 337
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A6H5JZ07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ07_9PHAE) HSP 1 Score: 184 bits (466), Expect = 3.670e-50 Identity = 83/145 (57.24%), Postives = 103/145 (71.03%), Query Frame = 2
Query: 98 EGVDWQNAPRIDLVCRTYGAAIQIFWQTFIPTYL------------------MFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISP 478
EG+DW+NAPR+DLV RT+ ++ FW F+P++L +FWPISSW SSG+VVILDG++ DH GT+LQ++N P QVKYE PAP GTLC +WR EGYARQQYSNFYG+LYTDA+YV IIDTD I+P
Sbjct: 33 EGIDWKNAPRVDLVTRTFAGGVKAFWDIFLPSFLVSRGGNAWQVDSNVVPSQLFWPISSWTSSGVVVILDGENALDHEAGTILQHMNFPFVFQVKYEAPAPNGTLCGDWRKEGYARQQYSNFYGNLYTDAEYVAIIDTDTKIIAP 177
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A0G4J7L3_PLABS (Uncharacterized protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7L3_PLABS) HSP 1 Score: 183 bits (465), Expect = 1.610e-49 Identity = 111/266 (41.73%), Postives = 151/266 (56.77%), Query Frame = 2
Query: 149 YGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGMN-IITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHI-ADRDTGDFHGLNLQGRARASDDGSVVAA--NVPAIFVMKHLDDKD 934
Y +WQ F+ + +FWP +W +S +VV+LD +S D R+ ++L LP V +E PG LC ++RSEGY RQ YSNF+ D T+AD+VG +D+D FI+PV DLF GKP + N T W S R A GG P V+ FMT +FP I+ HF+ MR I LGA TF++AF IC+ E Q+++M +YLWY H D+Y+WH A R F +A SDD V+AA PA+ +MK + D
Sbjct: 2 YSGTAPEWWQAFVVGHQLFWP-RAWTNSDVVVVLDAESAHDWRVASVLSR--LPPFPAVVFEAKPGPGVLCASFRSEGYCRQMYSNFFADRQTEADFVGFVDSDTMFITPVAVGDLFVGGKPRVSAYNGCCTGWNSPIER-AIGGKP-VAEFMTSSSFPFIVHRGHFAPMRAHIARTLGAATFDDAFHTICAEYGEH--QYDLMGHYLWYAHRDDYAWHFRAPRGHDAF-------QAAQSDDADVLAAMQTRPAVSLMKMIGHSD 253
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A1S3H6D8_LINUN (uncharacterized protein LOC106152497 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H6D8_LINUN) HSP 1 Score: 127 bits (319), Expect = 7.730e-28 Identity = 83/244 (34.02%), Postives = 129/244 (52.87%), Query Frame = 2
Query: 110 WQNAPRIDLVCRTYGAAIQIFWQTFIPTYLMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGM--NIITQWQSETTRKAAG--GFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTGDF 829
W N P ++ R A I+ + IP+ +FWP + LVV+LD ++ SDH G L+N KV YE P+ + + G+ RQQ+S FY + YT+A+YVG +DTD F+S V P DLF GKP++ G+ +++ W K + G P V + M FP+I+K EH ++R + E + F++ FK + +SQF IM Y++ +H EY++ I R G++
Sbjct: 48 WTNVPSFEVFVRMCSAKKDIYDKILIPSMKLFWP----NDTRLVVVLDNETKSDHLCGEELRNRYPYPKVF--YENPSKA------YNNHGHDRQQWSMFYPENYTNAEYVGFVDTDTLFVSTVTPEDLFLNGKPVVIGVYGSLLNSWWRGVALKTSKLFGKPEVMKCMGY--FPVIVKVEHIVKLRHYL-EKRHNKPFDDIFKEYTVV--DIFSQFNIMCQYVYTFHRSEYNFRIQKRPNGNW 274
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A7S1J303_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J303_9EUGL) HSP 1 Score: 110 bits (275), Expect = 1.690e-23 Identity = 90/277 (32.49%), Postives = 130/277 (46.93%), Query Frame = 2
Query: 347 PGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDE-GKPILRGMN-------IITQWQSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTGDFHGLNLQGRARASDDGSVVAANVPAIFVMKH---LDDKDVFTLNDDMYENMCLGSNNEAGNC-----QRRPPAENDG-HAQTLKWSVGSTTWGDTYKDHSRRVSRAGSA 1126
PG +C R+ GY RQ YS F+ D +TDA+ + I+D D+ F + P LF E G+P++ G + +W T + A G P V+ FM FPI+IK F +RR I++ L TF+EAF+ I +SY Q I++NY W++H DEY WH++ ++ G +G+ NVPA V +H L + Y + C+ S GNC Q P N H L W W D +R + + GSA
Sbjct: 2 PGGICG--RNTGYDRQMYSGFFADCFTDAEVIAIVDNDSLFTTVPTPGSLFSEDGRPVVIGKQSLYNIGKLAGRWAHAT--EVALGLPQVADFMFN--FPILIKRNVFGAVRRHISQQLNT-TFDEAFRIIAK-DPDSYCQINIILNYAWHFHRDEYKWHLS----------SMPGSKGPMINGTY---NVPAPRVAQHARGLYRSQIQNYVRTGYCHACVAS----GNCINATAQALMPTLNQWRHVVLLNWDHTGHVW-----DEARWMGKTGSA 248
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: A0A482QXN1_9EURY (Uncharacterized protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482QXN1_9EURY) HSP 1 Score: 110 bits (274), Expect = 5.980e-22 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 2
Query: 203 FWPISSWKS-------------SGLVVILDGDSPSDHRMGTLL----QNINLPSKVQVKYETPAPPGTLCNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDE-GKPILR---GMNIITQWQSETTRKA-AGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDTG 823
FWP +S S +V+LD +SP+DH +G L Q N P+ Q++YE P + G+ RQQ+S F+ D + +V +D+D F + + DLFD+ G+P + G + W A A G P V R M+ FP+I+K++H + +R I+ LG + F+ F+ +YSQF IM NY WY+H DEYSWH+ +R+ G
Sbjct: 66 FWPQASRPSVQHDKCALPPLQMQSFMVVLDDESPADHNLGAQLNHSLQAWNFPA--QIRYERPE------QYYGDRGHNRQQWSMFWADRHVSGKFVAFVDSDTIFTTQIHAGDLFDDVGRPRIIANVGAPQNSFWHDAPAATALALGKPEVLRCMSY--FPVILKTQHLAALREHISSTLGGD-FDTVFQRHIVT--RTYSQFNIMCNYAWYFHKDEYSWHMQEREPG 281
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Match: UPI00077A8C31 (uncharacterized protein LOC107343138 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A8C31) HSP 1 Score: 104 bits (259), Expect = 4.790e-20 Identity = 73/214 (34.11%), Postives = 116/214 (54.21%), Query Frame = 2
Query: 197 LMFWPISSWKSSGLVVILDGDSPSDHRMGTLLQNI---NLPS-KVQVKYET-PAPPGTL--CNNWRSEGYARQQYSNFYGDLYTDADYVGIIDTDAAFISPVVPSDLFDEGKPILRGMNII--TQW--QSETTRKAAGGFPYVSRFMTRIAFPIIIKSEHFSQMRRVITENLGAETFEEAFKAICSAGKESYSQFEIMINYLWYYHHDEYSWHI 805
++FWP S K+ V++LD +S DH+ G ++ N + P K++V YE P G L ++ + GY RQ +S+F+ DLYT+ + +D+DAAFI+PV S +F+ K + G +W Q T A G P+V +M+ FP I + F+ R IT ++ A FE+AFK+ G + S I+++Y W++ D Y WH+
Sbjct: 84 VLFWPPSYGKT---VIVLDEESAPDHQFGEIVINHTRQHFPEYKLEVLYEALPKDKGVLEFPHSRQRPGYNRQLWSSFFLDLYTNDSIIAWMDSDAAFITPVTKSSIFNGTKLRVLGWGCTFHIEWVKQYAITTMRALGLPFVVDYMSY--FPAYIYRDTFTHCREHITRHMNASDFEKAFKSFYLGG-DLLSPVSIVLSYAWFFERDRYDWHM 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9906.31751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9906.31751.1 >prot_Ecto-sp8_S_contig9906.31751.1 ID=prot_Ecto-sp8_S_contig9906.31751.1|Name=mRNA_Ecto-sp8_S_contig9906.31751.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=386bp MIAFALLVTLALLRPPGASPSLRLVEGVDWQNAPRIDLVCRTYGAAIQIFback to top mRNA from alignment at Ecto-sp8_S_contig9906:1531..5233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9906.31751.1 ID=mRNA_Ecto-sp8_S_contig9906.31751.1|Name=mRNA_Ecto-sp8_S_contig9906.31751.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3703bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9906:1531..5233+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9906:1531..5233+ >mRNA_Ecto-sp8_S_contig9906.31751.1 ID=mRNA_Ecto-sp8_S_contig9906.31751.1|Name=mRNA_Ecto-sp8_S_contig9906.31751.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1158bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9906:1531..5233+ (Ectocarpus species8 EcLAC_412)back to top |