mRNA_Ecto-sp8_S_contig99046.31748.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig99046.31748.1
Unique NamemRNA_Ecto-sp8_S_contig99046.31748.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C78E2DD (myosin heavy chain, muscle-like n=4 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78E2DD)

HSP 1 Score: 338 bits (868), Expect = 2.050e-113
Identity = 165/186 (88.71%), Postives = 172/186 (92.47%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDL-EDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFLVPSIE+KRADQAK YD KKSVWIPDPK  GYREG+LESG++ EDPA KC+V VGHEKFTHKASEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHR  KIYLGKRRNE PPHLWAIAE AYR ML N+KN AMLITGESGAGKTENTKKVITY
Sbjct:   18 EFLVPSIEMKRADQAKPYDNKKSVWIPDPKTHGYREGILESGEIDEDPACKCVVSVGHEKFTHKASEVGRVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRCSKIYLGKRRNEAPPHLWAIAETAYRGMLQNSKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C775177 (uncharacterized protein LOC111696211 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C775177)

HSP 1 Score: 352 bits (903), Expect = 4.130e-109
Identity = 165/185 (89.19%), Postives = 178/185 (96.22%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFL+P++++KRADQAKVYD KKSVWIPDPK GGYREGLLESGD++DPASKC+V VGHEKFTHK+SEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAK+IHTYSGLFVVVVNPYKRYPLYTHRV KIYLGKRRNECPPHLWAIAE AYR ML+N+KN AMLITGESGAGKTENTKKVITY
Sbjct: 2800 EFLLPNMDMKRADQAKVYDPKKSVWIPDPKSGGYREGLLESGDVDDPASKCVVAVGHEKFTHKSSEVGKVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKMIHTYSGLFVVVVNPYKRYPLYTHRVAKIYLGKRRNECPPHLWAIAETAYRGMLLNSKNQAMLITGESGAGKTENTKKVITY 2984
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C77AD49 (myosin heavy chain, muscle-like n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77AD49)

HSP 1 Score: 348 bits (894), Expect = 6.080e-108
Identity = 165/185 (89.19%), Postives = 176/185 (95.14%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            E+LVPS+EVKRADQAK YD+KKSVWIPDPK GGYREG +ESGDLEDPASKC+V VGHEKFT KASEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAK+IHTYSGLFVVVVNPYKRYP+YTHRV KIYLGKRRNECPPHLW+IAE AYR ML+N+KN AMLITGESGAGKTENTKKVITY
Sbjct:   19 EYLVPSLEVKRADQAKPYDSKKSVWIPDPKTGGYREGAIESGDLEDPASKCVVAVGHEKFTLKASEVGKVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKMIHTYSGLFVVVVNPYKRYPIYTHRVAKIYLGKRRNECPPHLWSIAETAYRGMLLNSKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C7639B3 (myosin heavy chain, muscle-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7639B3)

HSP 1 Score: 347 bits (891), Expect = 1.550e-107
Identity = 165/185 (89.19%), Postives = 174/185 (94.05%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFL+PS+++KRADQ K YD+KKSVWIPDPK GGYREG LESGDLEDPASKC+V VGHEKFTHK SEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAK+IHTYSGLFVVVVNPYKRYPLYTHRV KIYLGKRRNECPPHLWAIAE AYR ML N+KN AMLITGESGAGKTENTKKVITY
Sbjct:   19 EFLLPSMDMKRADQQKPYDSKKSVWIPDPKSGGYREGALESGDLEDPASKCVVSVGHEKFTHKGSEVGKVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKMIHTYSGLFVVVVNPYKRYPLYTHRVAKIYLGKRRNECPPHLWAIAETAYRGMLNNSKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C761DFA (myosin heavy chain, muscle-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C761DFA)

HSP 1 Score: 345 bits (886), Expect = 7.310e-107
Identity = 167/185 (90.27%), Postives = 171/185 (92.43%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFLVPSIEVKRADQ K YD+KKSVWIPDPK GGYREG LESGDLEDPASKCLV VGHEKFTHK SEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQ K+IHTYSGLFVVVVNPYKRYP+YTHRV KIYLGKRRNE PPHLWAIAE AYR ML N KN AMLITGESGAGKTENTKKVITY
Sbjct:   19 EFLVPSIEVKRADQQKPYDSKKSVWIPDPKTGGYREGFLESGDLEDPASKCLVSVGHEKFTHKGSEVGKVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQIKMIHTYSGLFVVVVNPYKRYPIYTHRVAKIYLGKRRNEVPPHLWAIAETAYRGMLTNCKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C779547 (myosin heavy chain, muscle-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C779547)

HSP 1 Score: 344 bits (882), Expect = 2.540e-106
Identity = 165/185 (89.19%), Postives = 172/185 (92.97%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFLVPS+E+KRADQ K YD+KKSVWIPDPK GGYREG LESGDLEDP SKC+V VGHEKFTHKASEVG+VNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAK+IHTYSGLFVVVVNPYKRYPLYTHRV KIYLGKRRNE  PHLWAIAE AYR ML N+KN AMLITGESGAGKTENTKKVITY
Sbjct:   19 EFLVPSVEMKRADQQKPYDSKKSVWIPDPKSGGYREGCLESGDLEDPGSKCIVSVGHEKFTHKASEVGKVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKMIHTYSGLFVVVVNPYKRYPLYTHRVAKIYLGKRRNEVAPHLWAIAETAYRGMLNNSKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C784459 (myosin heavy chain, muscle-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C784459)

HSP 1 Score: 335 bits (859), Expect = 3.220e-103
Identity = 158/185 (85.41%), Postives = 172/185 (92.97%), Query Frame = 1 
Query:    1 EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            EFLVPS+E+KR+D  KVYDTK+SVWIPDPK GG+REGLLESGDL+DP+SKCLV VGHEKFTHK++EVG+VNPPKFEK EDMVNLTFLNDASVFWNLKTRYQAK+IHTYSGLFVVVVNPYKRYP+YTHRV K+YLGKRRNE PPHLW+IAE AYR ML   KN AMLITGESGAGKTENTKKVITY
Sbjct:   19 EFLVPSMEMKRSDMNKVYDTKRSVWIPDPKSGGFREGLLESGDLDDPSSKCLVSVGHEKFTHKSTEVGKVNPPKFEKVEDMVNLTFLNDASVFWNLKTRYQAKMIHTYSGLFVVVVNPYKRYPIYTHRVAKVYLGKRRNEVPPHLWSIAETAYRGMLTTTKNQAMLITGESGAGKTENTKKVITY 203
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: A0A7R8CFT9_LEPSM (MYH6_7 n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CFT9_LEPSM)

HSP 1 Score: 250 bits (638), Expect = 4.230e-82
Identity = 125/174 (71.84%), Postives = 142/174 (81.61%), Query Frame = 1 
Query:    4 FLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGK 525
            FL+ S+E+KR D  K YD+KKSVW+PD + GG+REGLL+S D      K  V+ GHEK   K  +VGQVNPPKFEKCEDM NLT+LNDASVF NLKTR+QAKLI+TYSGLF VVVNPYKRYP+YT RV K+YLGKRRNE PPHLWAI E AYRNML N+KN +MLITGESGAGK
Sbjct:   20 FLIVSMEMKREDMLKPYDSKKSVWVPDGQ-GGFREGLLDSVD----GGKSNVMCGHEKKVFKNEDVGQVNPPKFEKCEDMANLTYLNDASVFNNLKTRFQAKLIYTYSGLFCVVVNPYKRYPIYTPRVVKMYLGKRRNEVPPHLWAITETAYRNMLQNSKNQSMLITGESGAGK 188
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: UPI000C75A59E (myosin heavy chain, muscle-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75A59E)

HSP 1 Score: 270 bits (690), Expect = 1.770e-80
Identity = 133/184 (72.28%), Postives = 152/184 (82.61%), Query Frame = 1 
Query:    4 FLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            +LV S+E+KR  QAK YD+KKS W PD  +GG+ E LLES +      K +V++GHEK T K+ +VGQVNPPKFEKCEDM NLTFLNDASVFWNLKTRYQ KLI+TYSGLF VVVNPYKR+P+YT  V K+YLGKRRNE PPHLWAI E AYRNML N+KN +MLITGESGAGKTENTKKVI+Y
Sbjct:   20 YLVVSMEMKREAQAKPYDSKKSYWCPDG-EGGFLESLLESNE----GGKAVVLIGHEKKTFKSEQVGQVNPPKFEKCEDMANLTFLNDASVFWNLKTRYQTKLIYTYSGLFCVVVNPYKRFPIYTPTVVKLYLGKRRNEVPPHLWAITETAYRNMLQNSKNQSMLITGESGAGKTENTKKVISY 198
[Close]
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Match: A0A0K2UMD7_LEPSM (Myosin heavy chain, musclelike [Bombus terrestris] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2UMD7_LEPSM)

HSP 1 Score: 269 bits (687), Expect = 4.490e-80
Identity = 136/184 (73.91%), Postives = 149/184 (80.98%), Query Frame = 1 
Query:    4 FLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASKCLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRYQAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAEGAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY 555
            FLV S+E+KR D  K YD KKSVW+PD K GGY  GLLES        K  V +GHEK T K+ EVGQVNPPKFEKCEDM NLT+LNDASVF NLKTR+QAKLI+TYSGLF +VVNPYKRYP+YT RV K+YLGKRRNE PPHLWAI E AYRNML N KN +MLITGESGAGKTENTKKVI+Y
Sbjct:   20 FLVVSMEMKREDMLKPYDPKKSVWVPDGK-GGYIAGLLESSS----GDKTTVALGHEKKTFKSEEVGQVNPPKFEKCEDMANLTYLNDASVFHNLKTRFQAKLIYTYSGLFCIVVNPYKRYPIYTARVVKMYLGKRRNEVPPHLWAITETAYRNMLQNLKNQSMLITGESGAGKTENTKKVISY 198
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99046.31748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C78E2DD2.050e-11388.71myosin heavy chain, muscle-like n=4 Tax=Eurytemora... [more]
UPI000C7751774.130e-10989.19uncharacterized protein LOC111696211 n=1 Tax=Euryt... [more]
UPI000C77AD496.080e-10889.19myosin heavy chain, muscle-like n=2 Tax=Eurytemora... [more]
UPI000C7639B31.550e-10789.19myosin heavy chain, muscle-like n=1 Tax=Eurytemora... [more]
UPI000C761DFA7.310e-10790.27myosin heavy chain, muscle-like n=1 Tax=Eurytemora... [more]
UPI000C7795472.540e-10689.19myosin heavy chain, muscle-like n=1 Tax=Eurytemora... [more]
UPI000C7844593.220e-10385.41myosin heavy chain, muscle-like n=1 Tax=Eurytemora... [more]
A0A7R8CFT9_LEPSM4.230e-8271.84MYH6_7 n=1 Tax=Lepeophtheirus salmonis TaxID=72036... [more]
UPI000C75A59E1.770e-8072.28myosin heavy chain, muscle-like n=1 Tax=Eurytemora... [more]
A0A0K2UMD7_LEPSM4.490e-8073.91Myosin heavy chain, musclelike [Bombus terrestris]... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99046contigEcto-sp8_S_contig99046:3..557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop0
Start0
Seed ortholog score224.6
Seed ortholog evalue3.9e-56
Seed eggNOG ortholog43151.ADAC010498-PA
Preferred nameMhc
Model size555
KEGG koko:K10352,ko:K17751
KEGG Pathwayko04260,ko04261,ko04530,ko05416,map04260,map04261,map04530,map05416
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005703,GO:0005737,GO:0005856,GO:0006928,GO:0006936,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007517,GO:0007525,GO:0007527,GO:0008150,GO:0008307,GO:0009653,GO:0009888,GO:0009987,GO:0010631,GO:0010927,GO:0014866,GO:0015629,GO:0016043,GO:0016459,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030016,GO:0030017,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030241,GO:0030707,GO:0030855,GO:0030898,GO:0031032,GO:0031033,GO:0031034,GO:0031647,GO:0031672,GO:0032501,GO:0032502,GO:0032504,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0034622,GO:0040011,GO:0042623,GO:0042692,GO:0042802,GO:0042803,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043292,GO:0043519,GO:0043520,GO:0043933,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0044703,GO:0045214,GO:0046983,GO:0048468,GO:0048477,GO:0048513,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050821,GO:0051128,GO:0051146,GO:0051179,GO:0051493,GO:0051674,GO:0051704,GO:0055001,GO:0055002,GO:0060361,GO:0060429,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071688,GO:0071689,GO:0071840,GO:0090130,GO:0090132,GO:0097435,GO:0098687,GO:0099080,GO:0099081,GO:0099512
Exons1
EggNOG free text desc.Myosin N-terminal SH3-like domain
EggNOG OGs38CVC@33154,3BBPR@33208,3CSM1@33213,3SH7R@50557,41XGJ@6656,4558B@7147,45KIR@7148,COG5022@1,KOG0161@2759
Cds size555
COG Functional cat.Z
Best tax levelNematocera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145359.0855608-CDS-Ecto-sp8_S_contig99046:2..5571681145359.0855608-CDS-Ecto-sp8_S_contig99046:2..557Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig99046 3..557 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99046.31748.1prot_Ecto-sp8_S_contig99046.31748.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig99046 3..557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig99046.31748.1

>prot_Ecto-sp8_S_contig99046.31748.1 ID=prot_Ecto-sp8_S_contig99046.31748.1|Name=mRNA_Ecto-sp8_S_contig99046.31748.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=185bp
EFLVPSIEVKRADQAKVYDTKKSVWIPDPKDGGYREGLLESGDLEDPASK
CLVVVGHEKFTHKASEVGQVNPPKFEKCEDMVNLTFLNDASVFWNLKTRY
QAKLIHTYSGLFVVVVNPYKRYPLYTHRVCKIYLGKRRNECPPHLWAIAE
GAYRNMLMNNKNNAMLITGESGAGKTENTKKVITY
back to top

mRNA from alignment at Ecto-sp8_S_contig99046:3..557+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig99046.31748.1 ID=mRNA_Ecto-sp8_S_contig99046.31748.1|Name=mRNA_Ecto-sp8_S_contig99046.31748.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=555bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99046:3..557+ (Ectocarpus species8 EcLAC_412)
GAGTTCCTGGTGCCTTCAATTGAGGTTAAGCGTGCGGATCAGGCCAAGGT
ATACGATACCAAGAAGAGCGTATGGATCCCTGATCCAAAAGACGGAGGTT
ATCGCGAGGGTCTGTTGGAGTCTGGAGATCTTGAAGATCCTGCATCCAAA
TGTCTTGTTGTTGTCGGCCATGAAAAGTTCACCCATAAGGCATCAGAAGT
TGGTCAAGTCAACCCCCCAAAGTTTGAGAAATGTGAGGACATGGTCAACC
TGACCTTCCTCAATGATGCTTCTGTCTTCTGGAACTTGAAGACCCGTTAC
CAGGCCAAGTTGATTCATACCTACTCTGGACTCTTTGTGGTCGTGGTGAA
CCCTTACAAGCGTTATCCCCTGTACACACACAGAGTGTGCAAGATCTATC
TTGGCAAGAGGCGCAATGAATGTCCCCCTCATCTGTGGGCTATCGCAGAA
GGTGCATACAGAAACATGCTCATGAACAACAAGAACAACGCCATGTTGAT
CACTGGTGAGTCTGGAGCTGGAAAGACTGAGAACACCAAGAAGGTCATCA
CCTAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig99046:3..557+

>mRNA_Ecto-sp8_S_contig99046.31748.1 ID=mRNA_Ecto-sp8_S_contig99046.31748.1|Name=mRNA_Ecto-sp8_S_contig99046.31748.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=555bp|location=Sequence derived from alignment at Ecto-sp8_S_contig99046:3..557+ (Ectocarpus species8 EcLAC_412)
GAGTTCCTGGTGCCTTCAATTGAGGTTAAGCGTGCGGATCAGGCCAAGGT
ATACGATACCAAGAAGAGCGTATGGATCCCTGATCCAAAAGACGGAGGTT
ATCGCGAGGGTCTGTTGGAGTCTGGAGATCTTGAAGATCCTGCATCCAAA
TGTCTTGTTGTTGTCGGCCATGAAAAGTTCACCCATAAGGCATCAGAAGT
TGGTCAAGTCAACCCCCCAAAGTTTGAGAAATGTGAGGACATGGTCAACC
TGACCTTCCTCAATGATGCTTCTGTCTTCTGGAACTTGAAGACCCGTTAC
CAGGCCAAGTTGATTCATACCTACTCTGGACTCTTTGTGGTCGTGGTGAA
CCCTTACAAGCGTTATCCCCTGTACACACACAGAGTGTGCAAGATCTATC
TTGGCAAGAGGCGCAATGAATGTCCCCCTCATCTGTGGGCTATCGCAGAA
GGTGCATACAGAAACATGCTCATGAACAACAAGAACAACGCCATGTTGAT
CACTGGTGAGTCTGGAGCTGGAAAGACTGAGAACACCAAGAAGGTCATCA
CCTAC
back to top