mRNA_Ecto-sp8_S_contig990.31741.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI) HSP 1 Score: 667 bits (1720), Expect = 1.850e-229 Identity = 509/568 (89.61%), Postives = 511/568 (89.96%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAAXXXXXXXXXTGHRLLPRPXXXXXXXXXXXXXXXXXXXXSDAGGRGAVDGREKVRGGMMVGPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLGGGARAALDTPAAASGVAGPGGMSMSFSNLPLSSSLADIKPNLTPAEAGAIHAEQARRSLSYPSAFAAASAATSSSPGYPINDAAAGAAATCASLGRIDRPPGVGVGAGFQQESEQAVAGSCCGGGREGGEGKSGRQQWSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXVSGSGMVPAVKGAAAPESARTSPSRRYPFASGDGSXXXXXXXXEERPAGNGGKMEGAGAGDGGLHRLCAALANVEAMDNMHRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTKRARDDGAEVGKAQVSARGA 1704
+VLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAA TGHRLLPRP XXXXXXXXX GRGAVDGREKV G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAALDTPAAASGVAGPGGMSMSFSNLPLSSSLADIKPNLTPAEAGAIHAEQARRSLSYPSAFAAASAATS SPGYPINDA+AGAAATCASLGRIDRPPGVGVGAGFQQESEQAVAGSCCGGGREGGEGKSGRQ WSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXVSGSGMVPAVKGAAAPE ARTSPSRRYPFASGDGS XXXXX EERPAGNGGKMEGAG DGGLHRLCAALANVEAMDNMHRRGXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RTKRARDDGAEVGKAQVSARGA
Sbjct: 144 KVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAAAAAASPAAPTGHRLLPRPAGAGASNDPLSXXXXXXXXXXXXXGRGAVDGREKVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAALDTPAAASGVAGPGGMSMSFSNLPLSSSLADIKPNLTPAEAGAIHAEQARRSLSYPSAFAAASAATSPSPGYPINDASAGAAATCASLGRIDRPPGVGVGAGFQQESEQAVAGSCCGGGREGGEGKSGRQHWSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXVSGSGMVPAVKGAAAPEGARTSPSRRYPFASGDGSGXXXXX--EERPAGNGGKMEGAG--DGGLHRLCAALANVEAMDNMHRRGXXXXXXXXXXXXXXXXXXXLKRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSRTKRARDDGAEVGKAQVSARGA 707
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.770e-44 Identity = 80/111 (72.07%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDA 333
+VLKPGLVKGQWSA ED +LV LV KGF+NWGQ+A+ M GRTSKQCRERW HHLDP+V+KG YTTEED I+ LQ E+GN+W++IAK L GRTENAVKIRWKAL+R +++A
Sbjct: 71 KVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNA 181
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI) HSP 1 Score: 154 bits (388), Expect = 3.090e-38 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRR 321
+VL+PGLVKGQW AEED L+ L F+NWG ++ M GRTSKQCRERWCHHLDP++ KG YT EED +II Q E+GNRW+ IA RL GRTEN++KIR KAL R+
Sbjct: 150 KVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.820e-38 Identity = 71/112 (63.39%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDAR 336
+VLKPGL+KG W+ EED +L LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LI+ +Q ++GNRW+ IA++L+GRTE+AVKIRWK+L R +R +R
Sbjct: 152 KVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.930e-38 Identity = 72/109 (66.06%), Postives = 91/109 (83.49%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 327
+VLKPGL+KG W+ EED +L LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LII +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R
Sbjct: 141 KVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKR 249
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.430e-37 Identity = 71/115 (61.74%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA 345
+VLKPGL+KG W+ EED +L LV +G +NWGQVA + GRTSKQCRERWC+HLDP + KG YT EED++I+ +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R +R+ A
Sbjct: 153 KVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSSRDNA 267
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A024UM09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM09_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.420e-37 Identity = 71/112 (63.39%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDAR 336
+VLKPGL+KG W+ EED +L LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LI+ +Q ++GNRW+ IA++L+GRTE+AVKIRWK+L R +R +R
Sbjct: 152 KVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE) HSP 1 Score: 154 bits (390), Expect = 8.160e-37 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNR 318
+VL PGLVKGQW+ EED LV +V +G +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T EED++I+ LQ ++GN+WA IA+ L GRTENA KIRWK L R
Sbjct: 112 KVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: A0A024GD30_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD30_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.260e-36 Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 327
+VLKPGL+KG W+ EED +L GLV G RNWG VAS + GRTSKQCRERWC+HLDP + KG Y+ EED +I+ +Q +GNRW+ IA+ L GRTE+AVKIRWK+L R R
Sbjct: 158 KVLKPGLIKGHWTIEEDAKLKGLVANGIRNWGHVASMIPGRTSKQCRERWCNHLDPNINKGSYSEEEDRIILEMQARLGNRWSVIAQHLKGRTEDAVKIRWKSLKRGHR 266
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Match: T0PUB4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PUB4_SAPDV) HSP 1 Score: 156 bits (394), Expect = 1.390e-36 Identity = 70/109 (64.22%), Postives = 90/109 (82.57%), Query Frame = 1
Query: 1 QVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 327
+VLKPGL+KG W+ +ED +L LV +G +NWGQVA+ + GRTSKQCRERWC+HLDP + KG YT EED+LII +Q ++GNRW+ IA+RL GRTE+AVKIRWK+L R +R
Sbjct: 150 KVLKPGLIKGHWTPDEDAKLKSLVAEGRKNWGQVAAQIAGRTSKQCRERWCNHLDPNINKGNYTKEEDDLIIDMQAKLGNRWSVIAQRLVGRTEDAVKIRWKSLMRSRR 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig990.31741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig990.31741.1 >prot_Ecto-sp8_S_contig990.31741.1 ID=prot_Ecto-sp8_S_contig990.31741.1|Name=mRNA_Ecto-sp8_S_contig990.31741.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=595bp MDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKback to top mRNA from alignment at Ecto-sp8_S_contig990:14819..17748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig990.31741.1 ID=mRNA_Ecto-sp8_S_contig990.31741.1|Name=mRNA_Ecto-sp8_S_contig990.31741.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2930bp|location=Sequence derived from alignment at Ecto-sp8_S_contig990:14819..17748- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig990:14819..17748- >mRNA_Ecto-sp8_S_contig990.31741.1 ID=mRNA_Ecto-sp8_S_contig990.31741.1|Name=mRNA_Ecto-sp8_S_contig990.31741.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1785bp|location=Sequence derived from alignment at Ecto-sp8_S_contig990:14819..17748- (Ectocarpus species8 EcLAC_412)back to top |