mRNA_Ecto-sp8_S_contig9882.31713.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.860e-99 Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIGARCSRCWRC 438
SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDK+SLGLVNAYQPSLTSTWMFQKSMSVGVGERV+ANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIGA CSRCWRC
Sbjct: 5 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIGAGCSRCWRC 150
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 265 bits (678), Expect = 5.580e-83 Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SGMQSPLSFGGFACLTRH+KRISEALSEALEGDLLDK+SLGLVNAYQPSLTSTWMFQKSMSVGVGERV ANLIVDLLANNF+SMDKLGNPVLKPFLQDVVQFGPLARVL GVTLDAPLSIPPLLLHVGIVPLADWIG
Sbjct: 471 SGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLIVDLLANNFRSMDKLGNPVLKPFLQDVVQFGPLARVLVGVTLDAPLSIPPLLLHVGIVPLADWIG 607
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A150GR87_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR87_GONPE) HSP 1 Score: 170 bits (431), Expect = 7.960e-48 Identity = 79/137 (57.66%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SG+QSPLSFGGF LTRH+ R+++AL+EALE D +D+ SLGLV+AY P L+S+WM QK+MSV +G+ + LI +LA NFK+M++LG PV+KPFLQDV+QFGP+ + + L PLSIP L+ HVG PL +W+G
Sbjct: 324 SGLQSPLSFGGFGALTRHLARLTDALTEALEADCVDRGSLGLVHAYNPGLSSSWMMQKAMSVRLGDTPSPQLINRMLAGNFKAMERLGEPVMKPFLQDVIQFGPMVQTMGAQMLTDPLSIPGLIAHVGPGPLLEWLG 460
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A8J4AY36_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AY36_9CHLO) HSP 1 Score: 170 bits (430), Expect = 5.720e-47 Identity = 80/137 (58.39%), Postives = 107/137 (78.10%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SG+QSPLSFGGF LTRH+ R++ AL+EA+E D LD+ESL LV+AY P L+S+WM QK+MSV GE+ +LI +LA NFK+M++LG+PV+KPFLQDV++FGP+ R + L PLSIP L+ HVG +PL +W+G
Sbjct: 440 SGLQSPLSFGGFGALTRHLARLTTALAEAVETDALDRESLALVHAYNPGLSSSWMMQKAMSVRKGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVIKFGPMMRTMTAQMLTDPLSIPGLISHVGPMPLLEWLG 576
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: D8THU2_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8THU2_VOLCA) HSP 1 Score: 165 bits (418), Expect = 3.240e-46 Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SG+QSPLSFGGF LTRH+ R++ AL+EA+E D LD+ SL LV +Y P L+S+WM QK+MSV GE+ +LI +LA NFK+M++LG+PV+KPFLQDVVQFGP+ R +A L P SIP L+ HVG PL +W+
Sbjct: 285 SGLQSPLSFGGFGALTRHLARLTAALTEAVEADALDRGSLSLVQSYNPGLSSSWMMQKAMSVRRGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVVQFGPMMRTMAAQILTDPASIPSLIRHVGPAPLLEWLS 421
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A836C4K2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4K2_9CHLO) HSP 1 Score: 165 bits (417), Expect = 5.460e-45 Identity = 80/141 (56.74%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIGARCS 423
SG+QSPLSFGGF LTRH+ R+++ALSEALE DLLDK SLG V AY P L+S+WM Q++MSV G+ +LI +LA NF+SM + G+PV+KPFLQDV+QFGP+ L P SIP L+ HVG PL +W+G S
Sbjct: 468 SGLQSPLSFGGFGALTRHLARLNKALSEALEADLLDKASLGRVAAYNPGLSSSWMMQRAMSVRQGDAPTPDLINRMLAGNFRSMQRFGDPVMKPFLQDVIQFGPMMTTLTAQMFGDPASIPRLISHVGPGPLLEWVGHMAS 608
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK) HSP 1 Score: 164 bits (414), Expect = 6.430e-45 Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIGARCSRCW 432
SG+QSPLSFGGF CLTRH+ R++ AL++ + D L +E L LVNAYQP+L+ WMFQK+MSV VG+R ++V L NNF +M+ G+PVL+PFLQDVVQF L + L + PL++PPLL HVG+ L DW+G W
Sbjct: 364 SGIQSPLSFGGFVCLTRHIGRLTGALADCVRLDRLSREDLALVNAYQPNLSGAWMFQKAMSVAVGQRAAPGIVVRTLQNNFGAMNSFGDPVLRPFLQDVVQFDLLLKTLVQAFILDPLAVPPLLFHVGLPALIDWMGHFAQLWW 507
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A7S3PA49_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA49_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.140e-44 Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SG+QSPLSFGGF LTRH++RIS A+ +AL DLL KE LG +NAY P+L++TWMFQ+SMSV +G+ V++ + LLA NF+ MD+ G +KPFLQDVV+F L LAG + P +P ++ HVG+ LADW+G
Sbjct: 50 SGIQSPLSFGGFGALTRHLERISGAVHDALADDLLHKEDLGKINAYTPNLSATWMFQRSMSVRMGQSVDSKFVNRLLATNFEQMDQAGLRTIKPFLQDVVRFDGLVSSLAGSFVADPTFMPQIIAHVGVPALADWLG 186
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A8HX01_CHLRE (Glycine/D-amino acid oxidase-like protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HX01_CHLRE) HSP 1 Score: 161 bits (407), Expect = 3.210e-44 Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 411
SG+QSPLSFGGF LTRH+ R++ AL+EA E D LD+ SLGL++AY P L+S+WM QK+MSV G++ LI +LA NF++M+KLG +KPFLQDV+QF P+ + L PLS+P L+ HVG PLA+W+G
Sbjct: 337 SGLQSPLSFGGFGALTRHLARLTNALTEAAEADALDRNSLGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELINRMLAGNFRAMEKLGEATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLG 473
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO) HSP 1 Score: 161 bits (408), Expect = 6.830e-44 Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSTWMFQKSMSVGVGERVNANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWI 408
SG+QSPLSFGGF LTRH+ R+ A++EAL+ + LDK+SL VNAY P L+ WM Q++MSV GER + N I LLA NF +M + G+PVLKPFLQDVVQ+GPL L L PL +P + HVG++P+ DW+
Sbjct: 430 SGIQSPLSFGGFGALTRHLGRLRSAITEALDAEALDKDSLAQVNAYNPGLSGAWMLQRAMSVRPGERPDPNFINSLLAKNFAAMQRFGDPVLKPFLQDVVQYGPLGLTLVSQMLSDPLFVPAIFRHVGVLPMLDWL 565 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9882.31713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9882.31713.1 >prot_Ecto-sp8_S_contig9882.31713.1 ID=prot_Ecto-sp8_S_contig9882.31713.1|Name=mRNA_Ecto-sp8_S_contig9882.31713.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=146bp MQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKESLGLVNAYQPSLTSback to top mRNA from alignment at Ecto-sp8_S_contig9882:4295..5626- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9882.31713.1 ID=mRNA_Ecto-sp8_S_contig9882.31713.1|Name=mRNA_Ecto-sp8_S_contig9882.31713.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1332bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9882:4295..5626- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9882:4295..5626- >mRNA_Ecto-sp8_S_contig9882.31713.1 ID=mRNA_Ecto-sp8_S_contig9882.31713.1|Name=mRNA_Ecto-sp8_S_contig9882.31713.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=438bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9882:4295..5626- (Ectocarpus species8 EcLAC_412)back to top |