|
|
Homology
BLAST of mRNA_Ecto-sp8_S_contig987.31697.1 vs. uniprot
Match: A0A6H5K3N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N5_9PHAE) HSP 1 Score: 717 bits (1852), Expect = 1.540e-247 Identity = 571/746 (76.54%), Postives = 578/746 (77.48%), Query Frame = 1
Query: 271 MATKCSDESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGGVTTPAAAVATAPAPGGATXXXXXXXXXXXXXETEVKAVVASVPAAAAAXXEAPXXXXXXXXXXXPQEAAGPMRLLPKASAFPTSRPATTVASARAAAKKMTSPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXVASRPAEKAAAGASSLSSDAAKPDVAVAAATVAVAGPSSPSPSTERPVVPSLSPTATPSPGAAAVXXXXXXXXXXXXXXXXXXXXXX-----GASKPQSPRAGGVLPRTGGTLPAPAAAPTPAXXXXGSSCSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSAATPAASNGNGASTVGAXXXXXXXXXXXXXXXPSRFQRTVPSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFENKARGGTTTAAKPTPVAKXXXXXXXXXXXXXXXXXXXXXAPVLTQGGXXXXXXXXQQPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 2493
MATKCSD+SVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAI KSLEDARSGGGVTTPAAA APAPG XXXXXXXXXXXXX ASVP A XXXXXX PQE AGPMRLLPK SAFPTSRP TTVASARAAAKKM SPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXX A A A A PSSPS TE+PVVPS SP A PSPGAAAVXXXXXXXXXXXXXX GASKPQSPRAGGVL P++A GS+ SSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSG XXXXXXXXXXXXXXXXXXXXXXXX GN+AAT AASNGNG ST A +AAA XXXXXXXXXXXXXXXXXX ENKARGGTT AAKPTPVAKXXXXXX APVLTQGGXXXXXXXX QPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS
Sbjct: 1 MATKCSDDSVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAIAKSLEDARSGGGVTTPAAA---APAPGXXXXXXXXXXXXXXXXXXXXXXXXASVPVA--------XXXXXXDGARAPQEVAGPMRLLPKPSAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXXXXXX---------------------XAVAEKAAARPSSPSSPTEQPVVPSSSPKAKPSPGAAAVXXXXXXXXXXXXXXGLPRAAAAAAASSGASKPQSPRAGGVLXXXXXXXXXPSSA-------TGSTSSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGSSSGPXXXXXXXXXXXXXXXXXXXXXXXXTGNNAATLAASNGNGVSTAAAVTASPKP------------------AAAAAPTPAANSATAGXXXXXXXXXXXXXXXXXXXXXENKARGGTTAAAKPTPVAKXXXXXXARS------------APVLTQGGXXXXXXXXXQPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 677
BLAST of mRNA_Ecto-sp8_S_contig987.31697.1 vs. uniprot
Match: D7FHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR2_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 1.060e-178 Identity = 468/667 (70.16%), Postives = 480/667 (71.96%), Query Frame = 1
Query: 496 NKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGGVTTPAAAVATAPAPGGATXXXXXXXXXXXXXETEVKAVVASVPAAAAAXXEAPXXXXXXXXXXXPQEAAGPMRLLPKASAFPTSRPATTVASARAAAKKMTSPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXVASRPAEKAAAGASSLSSDAAKPDVAVAAATVAVAGPSSPSPSTERPVVPSLSPTATPSPGAAAVXXXXXXXXXXXXXXXXXXXXXXGASKPQSPRAGGVLPRTGGTLPAPAAAPTPAXXXXGSSCSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSAATPAASNGNGASTVGAXXXXXXXXXXXXXXXPSRFQRTVPSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFENKARGGTTTAAKPTPVAKXXXXXXXXXXXXXXXXXXXXXAPVLTQGGXXXXXXXXQ-QPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 2493
+KDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKAD KATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGG XX XXXXXXXXXXX EAAGPMRLLP+ASAFPTSRP TTVASARAAAKKM SPTSPRSPAGSP A +VAV + ++SP A + A++ GASKPQSPRAGGVLPRTGGTLPAPAA PT XXXX +AAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSAATPA SNGNG ST AXXXXXXXXXX PSRFQRTVP+ XXXXXXXXXXXXXXXXXXXX AAFENKARGGTTTAAKPTPVAKXXXXXXXXXXXXXXXXXXXXXAPV+ QGGXXXXXXXX QPQSPKKQ Q RPTSPSKVTPESLLGKGTVM RKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS
Sbjct: 25 HKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADTKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGGX---------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAGPMRLLPRASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPSG-----------------------------------------------ARSVAV-------------LKSAVSPRAATAASASS-----------------------GASKPQSPRAGGVLPRTGGTLPAPAATPTXXXXXXXXXXXAAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSAATPAVSNGNGVSTA-AXXXXXXXXXXATAAAPSRFQRTVPAXXXXXXXXXXXXXXXXXXXXXXXXSRGPKASALAAAFENKARGGTTTAAKPTPVAKXXXXXXXXXXXXXXXXXXXXXAPVMAQGGXXXXXXXXXXQPQSPKKQAQARPTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 574
BLAST of mRNA_Ecto-sp8_S_contig987.31697.1 vs. uniprot
Match: D7FHR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR4_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.750e-39 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 271 MATKCSDESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNK 501
MATKCSDESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQ GANAGHRNK
Sbjct: 1 MATKCSDESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQGGANAGHRNK 77
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 63.2 |
| Seed ortholog evalue | 6.1e-07 |
| Seed eggNOG ortholog | 65071.PYU1_T008237 |
| Model size | 2514 |
| KEGG ko | ko:K20032 |
| KEGG TC | 9.B.37.1,9.B.37.3 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| EggNOG free text desc. | protein-cysteine S-palmitoyltransferase activity |
| EggNOG OGs | COG5273@1,KOG0509@2759 |
| EC | 2.3.1.225 |
| Cds size | 2244 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681145355.067471-CDS-Ecto-sp8_S_contig987:904..994 | 1681145355.067471-CDS-Ecto-sp8_S_contig987:904..994 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 905..994 - |
| 1681145355.08021-CDS-Ecto-sp8_S_contig987:1581..1656 | 1681145355.08021-CDS-Ecto-sp8_S_contig987:1581..1656 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 1582..1656 - |
| 1681145355.0910063-CDS-Ecto-sp8_S_contig987:1881..3570 | 1681145355.0910063-CDS-Ecto-sp8_S_contig987:1881..3570 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 1882..3570 - |
| 1681145355.104282-CDS-Ecto-sp8_S_contig987:3985..4144 | 1681145355.104282-CDS-Ecto-sp8_S_contig987:3985..4144 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 3986..4144 - |
| 1681145355.1151924-CDS-Ecto-sp8_S_contig987:6769..6868 | 1681145355.1151924-CDS-Ecto-sp8_S_contig987:6769..6868 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 6770..6868 - |
| 1681145355.1273594-CDS-Ecto-sp8_S_contig987:7503..7635 | 1681145355.1273594-CDS-Ecto-sp8_S_contig987:7503..7635 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig987 7504..7635 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681145355.1398294-UTR-Ecto-sp8_S_contig987:7635..7905 | 1681145355.1398294-UTR-Ecto-sp8_S_contig987:7635..7905 | Ectocarpus species8 EcLAC_412 | UTR | Ecto-sp8_S_contig987 7636..7905 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig987.31697.1 >prot_Ecto-sp8_S_contig987.31697.1 ID=prot_Ecto-sp8_S_contig987.31697.1|Name=mRNA_Ecto-sp8_S_contig987.31697.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=748bp
MATKCSDESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALL WASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVG QAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKA TDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGGVTTPAAAVA TAPAPGGATAAETAAAAPATAPETEVKAVVASVPAAAAAAAEAPAAEAPA DSAPAPQEAAGPMRLLPKASAFPTSRPATTVASARAAAKKMTSPTSPRSP AGSPRSVAAAASPPAGNAAPASPSGVASRPAEKAAAGASSLSSDAAKPDV AVAAATVAVAGPSSPSPSTERPVVPSLSPTATPSPGAAAVPAASPSPKSA GSPRAAAAAASSGASKPQSPRAGGVLPRTGGTLPAPAAAPTPASSAAGSS CSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGSGSGPSSNASA AATTIKPGLVKQSSYLLRTGNSAATPAASNGNGASTVGAAAASPKPAATA AAAAPSRFQRTVPSSAAAAATPAANSATAGSAAAVIGASRGPKASALAAA FENKARGGTTTAAKPTPVAKPVAKPVAKPVAKPVAKPVATPAPVLTQGGG AAAAAATQQPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQ KSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPSPPRCER* back to topmRNA from alignment at Ecto-sp8_S_contig987:905..7905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig987.31697.1 ID=mRNA_Ecto-sp8_S_contig987.31697.1|Name=mRNA_Ecto-sp8_S_contig987.31697.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7001bp|location=Sequence derived from alignment at Ecto-sp8_S_contig987:905..7905- (Ectocarpus species8 EcLAC_412) AGTAGCGAACCTTTGTTCCCGTGAAGAACGGCCGTCGCTGTCTCCTCTCT
GTGCCCTTCTCCGTGCAAGAAGCCACGCTTGGTCAGGAGACCAAGGAGCT
CTTCGTTGGGATAAGCTTCTGGGAGAGGGGTGCTTGTTTTCCGCGGCTCG
TGTTGGCGTGCTGACTGCAGCAAAGTTTTGTGTGTGTCTCCTGGGAAAAG
GGAAAGGCGCGCGGGAAGAGTTGTTGACGAGCAGTCCTCCTCTCTCTTGT
GATACTGGGTAGGGAAGAAGATGGCCACGAAGTGCTCCGATGAGTCCGTG
TTGGCAGGGCTGTTCCTGGCCGCCTACAGCGGAAACCTGGCGGACGTGAA
GTCCACGCTGAAAAATAACGCGCTCTCTGCGGACGTCGCTGACCCAAACA
AGGTATGTACGGGATTTGATGATGACGTGCAAACAGCAGCAGCAGATGGG
AGGGATCCAACTTTTATTTTCGGCCATGGCACTTGTCTCCTTTTCGAATC
TCTCCCCTCCCACACCGCTGCTGTGGCACACCGCCATGCTGTTAACCACG
GCAAGAGCAGCAAGTTGGCCTGTTTCCCTAGAGCTCGATAAGGCCTCTAG
CTCACGGTCTCTCCTGCGGCGTGGCTTGGTTTTTCGATTTCGAATGATCG
CACACTACCTGCTGCTGCTGCTGCTGGTGCGGCAAAAAACAAATGTCTTG
ATTTTTGTGAAGTCGTCCTTTCCGCCGGGAACGGTCGGCCATGATCGCTT
CTTGCTTGCATGTCTCTCGCCCGATCAGACCGCTTGTTCTTTCTACCCAC
CACCATTCCTTCCTCTACAAGGCAGAAGCCATGACTGGGTCGCTGCCTAG
GAAAGCTTTCAGCACCCGCCTGTACGGCGTTCTATGCAAATGAACAGCTG
CAAATGAAGAACACACACAAAGGCACAGGGGAACAGATAAATTGTAGCGA
ACCACCTTTTTTTCGCCGCCCTCCTGTTGACTGTTTGTTGGCGACTGCGT
TGGGATGTCGATGCGTCGATGGTTTCCGAGACACCAGGGCTCTACGGCCC
TGCTTTGGGCGAGCACCGGCGGAAGTCTGGAAGTGGTGGAATGGCTGGTG
AAGCAAGCGGGGGCGAATGCGGGGCATCGAAACAAGGTACGAGGAGATGC
GATGGCCGCCGGGAGGGAGCAATTTTGATTTTCAATTTCAAATATCAACG
CGGGTGGTGTGCAAAATCAGCTGCTGCTGCTGCTTTCGAAGAATCAATTT
TTCGTTCCTGTATCCCCTGACAGTAGGCCAGTTGACAGTTGACGCAATCA
AAGAGCGTGCGCCTGGGGCGTGTGTGTATCGGGCAGACGGCTACGTATGC
TAAGTAGCTCAGCTTTTCTCTGGTGACATGAACAGATGCGGGGTGGAAAA
CGCATGATGTGTGAGCAATCACCACCACCACGCCACGTAAAACAACCGTG
CCGCCGCGAACAAAATAAAATATAAGGCGTCTGTCTCCGTTCGTCTTGGC
CTTTGTTGGCAGCAAGCGACAGGCGTGGAAATTCTTCTGGTTTTCCCTTC
AAGGTTATAATTGTTTGCCACGGGGTCGAATACGAGCACACCACATCATC
CGGGGCACCACCCTTGCGCTCTTTTTCGAAAGTGGTTACTGAGCAATTTT
TCTTGTAGTCGGGGATCGCACGAACGATGGATGTTTTCTTGTCCATCTGT
CGCTGTGTTGTGTGCACTTAAATTGCAAAGTTCCATTTTCCCGGAACGTT
TTGAACCGAAACAGACGCGCAACAGCAGTCGTGCGCCCTTCTAGTAGAGA
GCACCCTAGAAATTGATGTTCTAAAGGAGACAAACGAAGCGGTTCTCAGT
GTAGAAGCGTGCACTCATAAATATGTTGTCGGTGTCGGCTTCCCTCGCAG
ACCCACTCAATAAGGAACAGCCCTCGTGAAGAATTGAAGGTTCGTAGTTC
GTGTGAAATGTGGTGGTGTTGGTTTTAGGAAGCTTCTCCTTCCTTGATCG
CCCTCTCTCGCTCTCTTTTCTTCGCTGACGTTGTTCACAGCAGTTGTATC
TATCACTCGTGTTCTGTAACCGTTGATGTACATCAGCCGAGGGGTGAAGT
TTCCCGCACCACCACCTCCGAGTCCGACATGCCGGCGGCACTGTATGAGC
ACCGACACTTGTCCGAGTAGAAAATGAGTGGGTTCCATTCCCTACAGGTC
ACACCGCTGCTGAACGATCTCGCTTCCCCCGATCTATTGCTTGTATAATA
GCATCGACTTCTTGGAAGCATACATAAGGTGAGAGAAGGCTCAACACCCT
ACTCGATACAGCAGCAGTTACAATATAGGCGGTTTTGTTCTCCCAGTAGA
GCAACGTTCGGACCGGTGTCCGCTACTGAACCCTACATCTAGTCGGCGCT
GCTGCTGCGGCTTCAAGTTCAAAAAACGAATTTTCACAAGCTTATCCCAC
ACGCATGTTTCTTCGAAGTACACACGGTAGATGTGAACATATGAACACAT
CCCAACCGTTTAAGTACTGACACGGCAGAGACCAGACCAATGCCTGGGAG
GGGTCTCGAAGTTTGGGATGTCGTGGTACATTTTCTACATGGATAGACGA
AATCCCACCACTCGAGAAACCCACCTGTTTCGTGGCCGTCTCACCGCTAA
GACTAAGATTTCTACGCATTCCCTTTGGCTGCTGTGGTGTCATCTCGAAT
GGTAGTTTCTCTGTGACGATATGATACATTCGGAGAGGCAGGTGGTCTGA
AAGGGGCTGTCGAACCCAATGCTCAAATTCGACGATTGAGGAGAAGGAAT
GGGTGGCGTTTACACTTGCAACGACCCGCACACAATCATTTGAACTCTTT
TCGCCTTATCTTTGATGGAGGAGACTTTGTAGCAAGAACGTCAAGCGCTG
TTCTGGACGTTATTTCCGCTCGCCCTACCGTACGACATCAAACTCGTGAA
AACTGCGCGCCTCCTGTACCCAAGCCGGTTTTTTTAGATGTTGGCTGCCC
CGCATGGGCAGCGTGACAGAAGTTCCGAGCTATGCACGCCTCCTCCGAAA
AAGATTGTCAAAAGCATGGCAGTTGCGAGCGCCTCCGCCTCTTTCTCGGC
GCAGACACCCTCTTGTGCTGTGGATGGCATCGATGGAGCTTTGGAAATCG
ATCCTTAGAAATGCCGGTGTGGGGTCTTGCCTGAAAGTGTCGAGTGTCAG
CTCCCATGGTGGTCGTGGCAACAGTGCGGCGTGCAGAACCGGTCTCAACC
CGGGGGGCGGGGGGGCTGCAAAGGCTGTGCGTCCAATTCGGCCAAGCTTC
GGCGGATTTCCGAGCGGTGTTGCCAGAACCGTACCGCTACTGCTGCCGTG
CAGCTTTTACATGCCACCTACAACACCGTTCCCCGGCACGGAGTGTGGCG
CTTGTTCTCCATGTGACAGACGGTGCCGGTGCCGAAGATGGCTACTCTCA
AGTATTCCGTCGCGTCGGTCGTACTTGTATGTCAGATAGTAGTCTGACAG
GAACGATGGTGGGGTGGCAAGCCGGGCACTTACTTGTGGAATGGACCCCG
GGACCAATTTCCATGCACGACTGCCACGGCCGACTCATGCCAATCTAGAT
GTCGCCGCGTGCCACAAGGCCGCGTGTGTTTTACGACTACCCCCGCAGCA
TGTCATCCTCGCACCCATGAAATCTGACTCTTCGCTCGTTTTTCTTCTTT
TTCTTTCGCCGCTGCCGCCGAACACCTGTGTGTGGGTGTTTTCTTGTGTT
GTGATCGCCAGGATGACCGCACGGCCTTCTTCTTCGCTTGCGAGCACTGC
CACACGCCCGTGGCGAACTTTCTGGTTGGGCAGGCCGGCGTGGAGGTCAA
CGCTAAGGACAAGCCATCGGGCCACACGGCCCTTCACCGCGCGTGCATCG
CCGGCCAGACCAGGGAGAAGGTGTGCTAAGAGAGGCAAAGGTCGAGCGTT
ATTTTTTTTGCAAGGACATCGGTTGGCCCCGACATACTACCCGGGTTTCC
ATACCGGGAGGACATTTGGGCTTCGTCGCGTTTCGTTGGGCTTTGACGAA
GTCTCTTTTGCTGTCGGGGAGTGGCTTGGTTGTTTTTCCTCCTCGTCTTG
TGCAGGATCCTGACAGAACTGGACCCCCCCGGATCGCGACCTGTACCAGA
ATCTTTTCGATTTTCGCGGCTCCACGACTGACGTCTTTTCATTGGCCAAC
GTGGTGGGCGCTACAGTAGCGACAAAGACACCGGACAGAAAAATAGCCGG
TGAGTATCTCTTATTTTTGGCGTTCCCCTCCCCCTTCCCCGGCAAACGGA
TGCGTATTTTTTGTCGATCCTTATCCCACCCACAGGCGCAGGCGACGGAG
CTGATCTCGTGGCTGCTTTCGTCGGCCAAGGCGGACGCCAAGGCCACCGA
CCTCGGTGGCCGCATGCCGGGAAACGCCGACCTTTCGGCTGAGGCGCCCA
GCCTCAAGCCTACGGCCCAAGCCCCCGCCATCACGAAGTCTCTCGAGGAC
GCGAGGTCGGGAGGGGGGGTTACGACGCCCGCCGCCGCCGTTGCCACCGC
CCCCGCTCCTGGAGGAGCGACCGCGGCCGAGACGGCCGCTGCGGCTCCCG
CGACGGCTCCTGAGACGGAGGTCAAGGCGGTTGTTGCTTCGGTGCCTGCC
GCTGCTGCTGCTGCTGCGGAGGCTCCTGCTGCTGAGGCTCCTGCTGATAG
TGCCCCCGCCCCCCAGGAGGCCGCGGGCCCGATGCGACTGCTCCCCAAGG
CGTCCGCGTTCCCGACCTCTCGCCCGGCCACGACGGTGGCTTCCGCCCGG
GCGGCGGCCAAAAAGATGACCTCCCCGACCTCGCCACGCTCGCCTGCAGG
TTCCCCTAGGTCTGTGGCGGCTGCCGCCAGTCCCCCGGCGGGGAACGCTG
CTCCCGCGTCGCCGTCCGGCGTGGCTTCCCGGCCGGCGGAGAAGGCGGCC
GCCGGGGCTTCGTCTTTGTCATCCGACGCCGCGAAGCCTGACGTGGCCGT
CGCGGCCGCCACCGTCGCCGTCGCCGGGCCGTCGTCCCCGTCTCCTTCGA
CGGAGCGGCCGGTCGTGCCGTCCTTGTCGCCAACGGCGACACCCTCGCCG
GGGGCGGCAGCGGTGCCCGCGGCGTCGCCTTCGCCGAAGAGCGCGGGCTC
GCCCCGCGCCGCCGCCGCCGCGGCTTCGTCCGGGGCGTCGAAGCCGCAGT
CGCCGCGTGCTGGAGGCGTTCTTCCCCGGACCGGAGGCACGCTGCCGGCG
CCTGCGGCGGCGCCGACGCCGGCTAGCTCCGCCGCCGGGTCGTCTTGTTC
TTCTGCTGCCAAGATTGTGGCCACGGGGGTGAAGCCGGGGCTGGTGAAAC
AGTCCTCGTACCTTCTCAGGAACGCCTCCGCCTCGAGCAGCAGCAACGGC
GGGAGGAGCGGGTCGGGCTCCGGGCCCTCGTCCAACGCCAGCGCCGCGGC
CACGACGATCAAGCCCGGCCTCGTGAAGCAGTCCTCGTACCTCCTGCGCA
CGGGGAACAGCGCCGCAACCCCCGCCGCAAGCAACGGCAACGGCGCGTCC
ACCGTCGGCGCCGCCGCCGCTTCTCCAAAGCCAGCCGCCACCGCCGCCGC
CGCCGCTCCGTCGCGCTTCCAGCGCACGGTCCCGTCTTCCGCCGCCGCCG
CCGCCACCCCGGCGGCGAACTCGGCCACCGCCGGCAGCGCGGCCGCGGTG
ATCGGAGCCTCGAGGGGCCCCAAGGCCTCGGCCCTCGCGGCCGCTTTTGA
GAACAAGGCCAGGGGAGGAACGACGACAGCGGCGAAGCCGACCCCGGTGG
CGAAGCCGGTGGCGAAGCCGGTGGCAAAGCCGGTGGCGAAGCCGGTGGCA
AAGCCGGTAGCAACGCCAGCACCGGTGCTCACGCAGGGGGGAGGAGCGGC
AGCGGCGGCGGCGACGCAGCAGCCGCAGTCGCCCAAGAAGCAGACGCAGG
TACGACCAACGTCTCCTTCCAAGGTTACCCCGGAGAGCCTTCTGGGGAAG
GGCACCGTCATGCACCGGAAAAAGGTGTGTGCTTCTCTGCCCTGCTGCGG
GGTGGTGGATATGTTGGTTTCGTTGCGGGGAAATATGATTTTGGTGCATG
GATTGGTTTTTTTGTTTGTTTACCTCGTCAACCTGATCTCCCTCTCATCA
TGTGTCTGGCTAGCTGGCCAATCACACTTGTCCTTTTCTCGAAGCCACGG
AAGAAAACTTACTTCTTTTTTTTTGTTGGATCGGTGGACGGGTTGTCAGG
TTTACGTGGCGGCGGCCCAAAAGTCAGGAAACGGATCCCCGGCGCCCCTC
ATCGGGAAGACCAAGAAGGAAAAGGTGGGAACTGGTTCCTTCCAAGTTAG
TCACAACAAAATACAGCATCCCGCAGAGGCTACTACAACACCCTTACGAG
ATAGTTTCTCAAAGAGAGGATGTGTTGGGAGTCGTTAGCAATGAGGATTC
ACGGACACCTGCTCAATGCTGGTCTTTCTTGTGAGACTGTTTTTCGTGCT
CGCCCTGAGAAACCAGTCATGCCATGTAGCTGGAACGAAAAACGCTCCGT
TGCGGGGTAGATTGAGAGAGATCAGTCCAAAAGCAATGAACCGGCATTCC
GCGGCAACCGCTCGGTGTACAACTAGATCTCTCCGCAAGGAAAGTAGCAA
CACAACTGACGTGTGAACGGGTGGATAGAATAAGGCACGGCGTTTGTTTT
GTTGTTGTGTGTGCTGTGTAAACTCCGACGACCTACGGCCGTAGTGCGGG
TTCCGGTAGAGCCCGTAAACCAACCGACAGCCGCGAGAGAGAAAGTCGTA
GTCGTGGTGTGCTCGCTCGCGCCCGGCCCGTTTCACAAAGTCTCGCCGCA
TTTTTTGCAATCGCGCCGCGCTGCGCCGTACCGCACCGAACCGCACCGCA
CCGCACCGCAGGACGGGAGCTTCATGGACAAGTTCGTGTCGATGTTCACT
ATTTCCCCGCAGTCCTCGCCGTCACCATCCCCGCCGAGGTGTGAGCGATG
A back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig987:905..7905- >mRNA_Ecto-sp8_S_contig987.31697.1 ID=mRNA_Ecto-sp8_S_contig987.31697.1|Name=mRNA_Ecto-sp8_S_contig987.31697.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2244bp|location=Sequence derived from alignment at Ecto-sp8_S_contig987:905..7905- (Ectocarpus species8 EcLAC_412) ATGGCCACGAAGTGCTCCGATGAGTCCGTGTTGGCAGGGCTGTTCCTGGC CGCCTACAGCGGAAACCTGGCGGACGTGAAGTCCACGCTGAAAAATAACG CGCTCTCTGCGGACGTCGCTGACCCAAACAAGGGCTCTACGGCCCTGCTT TGGGCGAGCACCGGCGGAAGTCTGGAAGTGGTGGAATGGCTGGTGAAGCA AGCGGGGGCGAATGCGGGGCATCGAAACAAGGATGACCGCACGGCCTTCT TCTTCGCTTGCGAGCACTGCCACACGCCCGTGGCGAACTTTCTGGTTGGG CAGGCCGGCGTGGAGGTCAACGCTAAGGACAAGCCATCGGGCCACACGGC CCTTCACCGCGCGTGCATCGCCGGCCAGACCAGGGAGAAGGCGCAGGCGA CGGAGCTGATCTCGTGGCTGCTTTCGTCGGCCAAGGCGGACGCCAAGGCC ACCGACCTCGGTGGCCGCATGCCGGGAAACGCCGACCTTTCGGCTGAGGC GCCCAGCCTCAAGCCTACGGCCCAAGCCCCCGCCATCACGAAGTCTCTCG AGGACGCGAGGTCGGGAGGGGGGGTTACGACGCCCGCCGCCGCCGTTGCC ACCGCCCCCGCTCCTGGAGGAGCGACCGCGGCCGAGACGGCCGCTGCGGC TCCCGCGACGGCTCCTGAGACGGAGGTCAAGGCGGTTGTTGCTTCGGTGC CTGCCGCTGCTGCTGCTGCTGCGGAGGCTCCTGCTGCTGAGGCTCCTGCT GATAGTGCCCCCGCCCCCCAGGAGGCCGCGGGCCCGATGCGACTGCTCCC CAAGGCGTCCGCGTTCCCGACCTCTCGCCCGGCCACGACGGTGGCTTCCG CCCGGGCGGCGGCCAAAAAGATGACCTCCCCGACCTCGCCACGCTCGCCT GCAGGTTCCCCTAGGTCTGTGGCGGCTGCCGCCAGTCCCCCGGCGGGGAA CGCTGCTCCCGCGTCGCCGTCCGGCGTGGCTTCCCGGCCGGCGGAGAAGG CGGCCGCCGGGGCTTCGTCTTTGTCATCCGACGCCGCGAAGCCTGACGTG GCCGTCGCGGCCGCCACCGTCGCCGTCGCCGGGCCGTCGTCCCCGTCTCC TTCGACGGAGCGGCCGGTCGTGCCGTCCTTGTCGCCAACGGCGACACCCT CGCCGGGGGCGGCAGCGGTGCCCGCGGCGTCGCCTTCGCCGAAGAGCGCG GGCTCGCCCCGCGCCGCCGCCGCCGCGGCTTCGTCCGGGGCGTCGAAGCC GCAGTCGCCGCGTGCTGGAGGCGTTCTTCCCCGGACCGGAGGCACGCTGC CGGCGCCTGCGGCGGCGCCGACGCCGGCTAGCTCCGCCGCCGGGTCGTCT TGTTCTTCTGCTGCCAAGATTGTGGCCACGGGGGTGAAGCCGGGGCTGGT GAAACAGTCCTCGTACCTTCTCAGGAACGCCTCCGCCTCGAGCAGCAGCA ACGGCGGGAGGAGCGGGTCGGGCTCCGGGCCCTCGTCCAACGCCAGCGCC GCGGCCACGACGATCAAGCCCGGCCTCGTGAAGCAGTCCTCGTACCTCCT GCGCACGGGGAACAGCGCCGCAACCCCCGCCGCAAGCAACGGCAACGGCG CGTCCACCGTCGGCGCCGCCGCCGCTTCTCCAAAGCCAGCCGCCACCGCC GCCGCCGCCGCTCCGTCGCGCTTCCAGCGCACGGTCCCGTCTTCCGCCGC CGCCGCCGCCACCCCGGCGGCGAACTCGGCCACCGCCGGCAGCGCGGCCG CGGTGATCGGAGCCTCGAGGGGCCCCAAGGCCTCGGCCCTCGCGGCCGCT TTTGAGAACAAGGCCAGGGGAGGAACGACGACAGCGGCGAAGCCGACCCC GGTGGCGAAGCCGGTGGCGAAGCCGGTGGCAAAGCCGGTGGCGAAGCCGG TGGCAAAGCCGGTAGCAACGCCAGCACCGGTGCTCACGCAGGGGGGAGGA GCGGCAGCGGCGGCGGCGACGCAGCAGCCGCAGTCGCCCAAGAAGCAGAC GCAGGTACGACCAACGTCTCCTTCCAAGGTTACCCCGGAGAGCCTTCTGG GGAAGGGCACCGTCATGCACCGGAAAAAGGTTTACGTGGCGGCGGCCCAA AAGTCAGGAAACGGATCCCCGGCGCCCCTCATCGGGAAGACCAAGAAGGA AAAGGACGGGAGCTTCATGGACAAGTTCGTGTCGATGTTCACTATTTCCC CGCAGTCCTCGCCGTCACCATCCCCGCCGAGGTGTGAGCGATGA back to top
|