mRNA_Ecto-sp8_S_contig9863.31686.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: A0A6H5LBI9_9PHAE (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBI9_9PHAE) HSP 1 Score: 583 bits (1504), Expect = 3.020e-205 Identity = 285/290 (98.28%), Postives = 286/290 (98.62%), Query Frame = 1
Query: 1 TEWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAESVRSLHDLAEAELGDKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGVWQDHASIVACDFVEETQLVRNCVGACLMKMARASAEGDAAAHAGGG 870
TEWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWA TQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREP FWPGVRQAWTGAESVRSLHDLAEAEL +KNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGVWQDHASIV CDFVEETQLVRNCVGACLMKMARASAEGDAAAHAGGG
Sbjct: 236 TEWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWAKTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPHFWPGVRQAWTGAESVRSLHDLAEAELAEKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGVWQDHASIVTCDFVEETQLVRNCVGACLMKMARASAEGDAAAHAGGG 525
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: UPI00106A8DB1 (uncharacterized protein LOC114520878 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A8DB1) HSP 1 Score: 111 bits (277), Expect = 6.030e-24 Identity = 84/274 (30.66%), Postives = 133/274 (48.54%), Query Frame = 1
Query: 4 EWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPS--ELVLLDFHRFPGLGHGA----PHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQ-----QKGRVGILWNAVEAREPPFWPGVRQAW-TGAESVRSLHDLAEAELGDKNGLLWSLPLVLPAGVPRPVPHIPEHLD----DWLSAGGVWQDHASIVACDFVEE 777
+WM Y+ L L L+EM+LPGTHDSGT + + + W TQ+L + QL+ GVR LDLR G + D V +VHDK RTS +L AL+ + F+ + E+++LDFHRF LG ++K A + S L G ++ + H G+ + + KGR+ + WN + WPGV Q W A+++ L+ + ++ + LW+ + + P D W G + + A+I++ DFV +
Sbjct: 165 KWMSYYSDVLGKLTLTEMTLPGTHDSGTHDPKSSLGALWIKTQSLSLGQQLQFGVRALDLRIG----QNSPGDYV-----IVHDKWRTSYTLAAALKEITDFIDQDSTNKEIIILDFHRFVKLGRRVRRRYDYDKLKAQIRSCLTG---YLLPVQNGH---GKQLQEIWQTCGKGRLVVAWNTSNP-DSYMWPGVNQRWYANADTLIKLYGAIKTDMLNPPSGLWASCSFMESSAVHPPSRNAIAADPTIKQWYYGGSTFCEKANIISVDFVRK 422
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: UPI000D7982C5 (hypothetical protein n=2 Tax=Pseudomonadaceae TaxID=135621 RepID=UPI000D7982C5) HSP 1 Score: 96.7 bits (239), Expect = 1.630e-18 Identity = 66/192 (34.38%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCG-YVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAE 579
WM Y A A+L++ EM LPGTH+SG+ K + + + T Q++ AQL+ G+RVLDLR Y G A R + H L+ +A+P E+V+LDFH+F A H + A V+ G + +I PK++ L ++ + QK V I ++ R+P FWPGV Q W G +
Sbjct: 89 WMGYYPGATASLRIDEMILPGTHNSGSDKQAD-YTNSYDTCQDVSPHAQLQTGIRVLDLRVRFYPGYPAGDWKRFM----IYHSLDSGRTVRGDILQAAMNLYKAYPKEVVILDFHQFSNFTDAA-HRELANVIKQTFGDK---LIEPKWKPLVLRQLWALQKNVV-IAYDD-NRRDPQFWPGVNQRWIGKD 269
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: A0A1I5EX81_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A1I5EX81_9PSED) HSP 1 Score: 95.9 bits (237), Expect = 2.990e-18 Identity = 70/196 (35.71%), Postives = 107/196 (54.59%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRC----GYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALE--CVKGFVQ---AHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAW 567
WM Y SA A+L++ EM LPGTH+SG K P + + T Q++ +QL+ G+RVLDLR GY +A++ + H SL+ R+ +E C++ + A+ +E+V+LDFH+F A H + A V+ + LG +I PK+ L ++ + QK V I +N + R+P FWPGV Q W
Sbjct: 89 WMGYYPSATASLRIDEMILPGTHNSGMDKQA-PYSNSYETCQDVSPHSQLQTGIRVLDLRVEFFFGYPVGDAKR-------FMIYH-----SLNSRRTIEGDCLQAAINLYTAYGNEVVILDFHQFKNFTDTA-HRELATVIKNRLGSR---LIEPKWNVLTLRQLWALQKNVV-IAYNHSQ-RDPLFWPGVNQRW 265
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: G8Q0P0_PSEO1 (Uncharacterized protein n=3 Tax=Pseudomonas ogarae (strain DSM 112162 / CECT 30235 / F113) TaxID=1114970 RepID=G8Q0P0_PSEO1) HSP 1 Score: 93.6 bits (231), Expect = 1.910e-17 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRC----GYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTG 573
WM Y A ANL++ E+ LPGTH+SG+ K P + + T Q++ QL+ G+R LDLR GY + ++ + H L+ A+P E+++LDFH F A H + A V+ + G + +I PK++ L ++ + QK V I ++ R+P FWPGV Q W G
Sbjct: 181 WMGYYNGATANLRVDELVLPGTHNSGSDKQA-PYSNSYDTCQDVSPHTQLQTGIRALDLRVKFYWGYPAGDWRR-------FTIYHSLDSGRNVRGDILQAAMNLYNAYPQEVIILDFHEFRDFTDAA-HRELATVIKTTFGDK---LIEPKWKSLVLRQLWALQKNVV-IAYDD-NRRDPQFWPGVNQRWIG 359
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: A0A4Q4L168_9PSED (Phospholipase n=1 Tax=Pseudomonas koreensis TaxID=198620 RepID=A0A4Q4L168_9PSED) HSP 1 Score: 86.7 bits (213), Expect = 6.270e-16 Identity = 81/289 (28.03%), Postives = 136/289 (47.06%), Query Frame = 1
Query: 4 EWMKTYASALANLKLSEMSLPGTHDSGTA-KMHNPVVSP---WATTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIA---VVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRH-LPFGRI--MSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAESVRSLHDLAE-----AELGDKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAG-GVWQDHASIVACDFVEETQLVRNCVGACLMKM 822
EWM T +L +L L +M+LPGTH++G+ + P++ P W Q+ QL G R LD+R Y ++ +G+A + H+ HR S +L + V F++ HP E ++LDFH G + +++ LG + I P+ H LP ++ +S ++ V + + E F + WTG ES+ + +L + + + WSL + + PV I + L+DW G W +I+ DF+EE+++V C A L K+
Sbjct: 9 EWM-TATPSLDSLTLLQMALPGTHNAGSDWQASYPLLGPPRHWLACQHNTFFHQLHHGARALDIRLDY--------EQSAEGLAKFRLHHNGHRNSRTLGHLVTDVNDFLEKHPDEFIVLDFHALDGENFDFAYFNQ--MIIHFLG----MRIIPRSNHYLPIEQLKQISPRQCIVVAAQSHRDLNESVFIGKIDHEWTG-ESITNAQELHQFITQLLKKPSSSWEFWSLSATSYSALGGPV-DIHDQLNDWFDPGKSNWAQLCNIINVDFIEESRIVDFCRTANLNKV 280
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: A0A7X1YB11_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas helleri TaxID=1608996 RepID=A0A7X1YB11_9PSED) HSP 1 Score: 84.3 bits (207), Expect = 4.940e-15 Identity = 81/281 (28.83%), Postives = 127/281 (45.20%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCGYVGREAQ-KNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAH------PSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAESVRSLHDL--------AEAELGDKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGV--WQDHASIVACDFVEETQLVRNC 798
WM T L +L +S++ LPG+HDSG+ K + P TQ++ QL G+R LDLR + + A + +R Q HRTS S R + G + + E+V+LDFH F A H + A+++ L + +I F +L G I SQ GR ++ R FW GV W+G +++ S H+L A+ + D+ + VLP VP + +D W + + + I+ D+ +QLV+NC
Sbjct: 7 WM-TQTPELQSLLISQLILPGSHDSGSDKEAPNLQLPQEITQDVSPKKQLLHGIRALDLRVAFYSKYAPGQPERFQLF-------HRTS-SGRNVANDILGMLLDYFEDPRAQQEIVVLDFHEFRDFNPQA-HAELKALIIDTLQSK---IIPYHFNNLKVGEIWSQHPGRNVVVAYNTSPRHALFWYGVNHHWSG-KNLLSTHELKIFMDSRIAKYKSNDELDSIQCAKYVLPFFVPD---DFSDTIDSWFLSENEHSYIQNFFIINTDWTTRSQLVKNC 270
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: UPI001B31FF45 (hypothetical protein n=1 Tax=Pseudomonas sp. P42 TaxID=1080160 RepID=UPI001B31FF45) HSP 1 Score: 84.0 bits (206), Expect = 5.850e-15 Identity = 77/282 (27.30%), Postives = 125/282 (44.33%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHG-APHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILW---NAVEAREPPF-WPGVRQAWTGAESVRSLHDLAEAELGDKN----GLLWSLPLVLPA--GVPRPVPHIPEHLDDWLSAGGVWQDHASIVACDFVEETQLVRNCVGACLMK 819
WM S++ N KL ++SLPG H++G + + + + T Q QL G+RVLD+R Y + + R HD ++ SL + V F+QA+PSE+V+LD H + P ++ ++ G +I ++ I + R GI+ N + P WP + W G V + + E +N G LWS+ + GV I L+ W S G WQ ++I+ DF ++++VRNC+ + L K
Sbjct: 19 WMGDLRSSIGNKKLWQLSLPGAHNAGMDRKAS-YSNSYITCQGESFRYQLDNGIRVLDIRLKYFAGHSGTSLR----FVHTHDL-QSGRSLWDTMHEVYWFLQANPSEIVILDIHDLMTWNNSPVPFQELHDYLVGDFGW---ALIPRVAVNMTMNEIKANYP-RGGIILAAPNGLSRLNPTLIWPQINHRWAGGGLVSTSRLYSHIESVMRNPPAAGALWSMSATCYSIWGVQN----IKSELNGWYSIGSEWQRKSNIINVDFFNDSEIVRNCIESNLRK 286
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: A0A5B0FCM1_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. ANT_J12 TaxID=2597351 RepID=A0A5B0FCM1_9PSED) HSP 1 Score: 82.8 bits (203), Expect = 1.510e-14 Identity = 78/286 (27.27%), Postives = 128/286 (44.76%), Query Frame = 1
Query: 7 WMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHR-TSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAESVRS---LHDLAEAELGDKNGL-LWSLPLVLPAGVPRPVPHIPEHLDDWLSA--GGVWQDHASIVACDFVEETQLVRNCVGACLMKMARASAEG 843
WM L L++ E+ LPGTHDSG K + + P TQ++ Q+KAG RVLDLR ++ +A ND + + HD +R S + L + EL++L+FH+F A H++ ++ +G +I P +R+ I + G+ ++ P +W GV+Q W G V + + E L K L S+ G+ P + +D+W + + I+ D+ +++V+NCV A RASA+G
Sbjct: 11 WMDN-TPGLYKLRIDELILPGTHDSGADKKASILNYPQEITQDVPASEQIKAGFRVLDLRVRFLPGKAA-NDPKRFQLYHWHDLNRFISTDILDMLNDFYDDSSSRAKELIILNFHQFDNFTDAA-HDELHLLINEKIGKR---LIPPSYRYSTIADIWKKIPGQTVVISYNKYTSYPDYWDGVQQQWMGENYVSTDKLKKFMDEVSLEPKRAYGLRSIQCAKYTGLFVP-DDFSDKIDEWFHSKDSNSYIQRFHIINTDWSTRSRIVQNCVHA---NQYRASAKG 286
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Match: I4NAW1_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. M47T1 TaxID=1179778 RepID=I4NAW1_9PSED) HSP 1 Score: 82.0 bits (201), Expect = 6.400e-14 Identity = 80/280 (28.57%), Postives = 128/280 (45.71%), Query Frame = 1
Query: 4 EWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKAGVRVLDLR----CGYVGREAQKNDRVQDGIA--VVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPPFWPGVRQAWTGAESV--RSLHDLAEAELGDKNGL-----LWSLPLVLPAGVPRPVPHIPEHLDDWLSAG-GVWQDHASIVACDFVEETQLVRNCV 801
+WM Y + +L++ + LPGTH+S + K S T Q++ L QL+AG+RVLDLR GY + ++ G + V D L+ ++ GF + E+V+LDFH F G A H + A ++ +G E ++ P + G+I S+ I +N+ E R+ FW GV Q W G+ + +L D A +K G + + LP VP + L W ++G G + I+ D+ +LV NC+
Sbjct: 89 DWMNRY-DGVRSLRIQDCILPGTHNSASDKEAKRAPSN-ETCQDVSPLKQLRAGIRVLDLRVQFYAGYPANDPRRFSIFHQGNSGRTVRDDILGGLAHFRS---TPGFNTSR--EMVILDFHEFKGFNKAA-HLELAKLIKGSVGVER--LVTPSMATMTIGQIWSKGPANTVIAYNSGE-RDSSFWSGVNQRWIGSNTPTDNALRDFIAAVGREKKGATELKAVQAAKYALPGFVPNDKS---DKLMTWFASGEGKPILNHYIINTDWSLRQRLVDNCI 354 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9863.31686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9863.31686.1 >prot_Ecto-sp8_S_contig9863.31686.1 ID=prot_Ecto-sp8_S_contig9863.31686.1|Name=mRNA_Ecto-sp8_S_contig9863.31686.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=299bp MKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWATTQNLGVLAQLKback to top mRNA from alignment at Ecto-sp8_S_contig9863:2428..7073- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9863.31686.1 ID=mRNA_Ecto-sp8_S_contig9863.31686.1|Name=mRNA_Ecto-sp8_S_contig9863.31686.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4646bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9863:2428..7073- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9863:2428..7073- >mRNA_Ecto-sp8_S_contig9863.31686.1 ID=mRNA_Ecto-sp8_S_contig9863.31686.1|Name=mRNA_Ecto-sp8_S_contig9863.31686.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9863:2428..7073- (Ectocarpus species8 EcLAC_412)back to top |