mRNA_Ecto-sp8_S_contig986.31679.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig986.31679.1
Unique NamemRNA_Ecto-sp8_S_contig986.31679.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig986.31679.1 vs. uniprot
Match: A0A6H5JRQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ9_9PHAE)

HSP 1 Score: 659 bits (1699), Expect = 1.130e-225
Identity = 393/500 (78.60%), Postives = 407/500 (81.40%), Query Frame = 1 
Query:    1 MGVDDEDESVLSDLRESIEEIEEENSHSDYSLEFDDDYEGSGHPRGAEQYQRGGEEGEGSNGQQNLPSAVWSATGVGSEKQGGHQHQQRQRLQQEGRDQERTTRSRVLADDTTTIIADRNNSGGLQVPPKRWSTGRQAHDNETHQQDYMDTTQTRNEPYSSTAAELGTMETKELLREERGDRGPSLPVQVLTLKARLDGLLRAGHDGVDSGHHHTVTEALTSVTREHAALRECLGDVERELLTARRKVEQDAVSRLQAAQQKRARAEARRIRHFEQLGEARRTAAVAKAEAEALRARVADGATELRHTGDMLETARSAASAAQDRADQCQKEAXXXXXXXXXXXEEMAHVRVEIEEERRKASVAVRNAAEKMELCERKRELEVDAATRAAEAREXXXXXXLKRLPEHQQQLLQAEKDRVVRWEERLAAEAASLQRREEAHKIDVEACRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFERERGELLRRVAAAESAGQA 1500
            MG DDEDESVLSDLRESIEEIEEENSHSDYSLEFDDDY+GSGHPRGA QYQRGGEEGEGS+GQQN PSAVWSATGVGSEKQGGHQHQQRQRLQ EGRDQERTTRS VL DDT  IIADRNNSGGLQ PPKR STGRQA  NETHQQD M+T Q RNEPYSSTAAELGTMETKEL  EERGDR PSLPVQVLTLKARLDGLL  GHDGVDSGH  TVTEALTSV REHAALRECLGD+ERELLTARRKVEQDA SRLQAAQQKRARAEARR+RHFEQLGEARR AAVAKAEAEALRAR+ADGATEL+H  DMLETARSAASAAQDRADQCQKEA                 R+      R  S+A R   +  +LCERKRELEVDAATR AEARE      +KRLPEHQQQLLQAE+DRVVRWEERLAAEAASLQRREEAHKID+EACRAQ                            AFERERGELLRRVAAAESAGQA
Sbjct:    1 MGADDEDESVLSDLRESIEEIEEENSHSDYSLEFDDDYDGSGHPRGAGQYQRGGEEGEGSHGQQNSPSAVWSATGVGSEKQGGHQHQQRQRLQ-EGRDQERTTRSHVLVDDTANIIADRNNSGGLQFPPKR-STGRQADGNETHQQDCMETVQARNEPYSSTAAELGTMETKELPSEERGDREPSLPVQVLTLKARLDGLLLGGHDGVDSGHQKTVTEALTSVKREHAALRECLGDIERELLTARRKVEQDAASRLQAAQQKRARAEARRVRHFEQLGEARRAAAVAKAEAEALRARLADGATELQHMRDMLETARSAASAAQDRADQCQKEAAVAEAGFCSKLSRTHDSRLCKSALLR--SLAFRLPLDGAKLCERKRELEVDAATRVAEARERAAEEQMKRLPEHQQQLLQAERDRVVRWEERLAAEAASLQRREEAHKIDMEACRAQIRRMEAETRARVEEDASRERSTLTNAKSAFERERGELLRRVAAAESAGQA 496
[Close]
BLAST of mRNA_Ecto-sp8_S_contig986.31679.1 vs. uniprot
Match: D8LEG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG2_ECTSI)

HSP 1 Score: 449 bits (1156), Expect = 6.030e-148
Identity = 271/352 (76.99%), Postives = 275/352 (78.12%), Query Frame = 1 
Query:  445 MDTTQTRNEPYSSTAAELGTMETKELLREERGDRGPSLPVQVLTLKARLDGLLRAGHDGVDSGHHHTVTEALTSVTREHAALRECLGDVERELLTARRKVEQDAVSRLQAAQQKRARAEARRIRHFEQLGEARRTAAVAKAEAEALRARVADGATELRHTGDMLETARSAASAAQDRADQCQKEAXXXXXXXXXXXEEMAHVRVEIEEERRKASVAVRNAAEKMELCERKRELEVDAATRAAEAREXXXXXXLKRLPEHQQQLLQAEKDRVVRWEERLAAEAASLQRREEAHKIDVEACRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFERERGELLRRVAAAESAGQA 1500
            M TTQTRNEPYSSTAAELGTMETKELLREERGDRGPSLPVQVLTLKARLDGLLRAGHDGVDSGHH TVTEALTSVTREHAALRECLGDVERELLTARRKVEQDA SRLQAAQQKRARAEARR+RHFEQLGEAR+TA VAK EAEALRARVADGATELRH  DMLETARSAASAAQDRADQCQKE                            A+VA        ELCERKRELEVDAATRAAEARE      LKRLPEHQQQLLQAEKDRVVRWEERLAAEAASLQRREEAHKID+EACRAQ                            AFERERGELLRRVAAAESAGQA
Sbjct:    1 MITTQTRNEPYSSTAAELGTMETKELLREERGDRGPSLPVQVLTLKARLDGLLRAGHDGVDSGHHLTVTEALTSVTREHAALRECLGDVERELLTARRKVEQDAASRLQAAQQKRARAEARRVRHFEQLGEARKTAVVAKTEAEALRARVADGATELRHARDMLETARSAASAAQDRADQCQKE----------------------------ATVA--------ELCERKRELEVDAATRAAEARERAAEEQLKRLPEHQQQLLQAEKDRVVRWEERLAAEAASLQRREEAHKIDMEACRAQVRRMEAETRARVEEDASRERSTLTNARSAFERERGELLRRVAAAESAGQA 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig986.31679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRQ9_9PHAE1.130e-22578.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEG2_ECTSI6.030e-14876.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig986contigEcto-sp8_S_contig986:8338..15507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1999
Hectar predicted targeting categoryother localisation
Exons12
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_004820.1
Cds size1911
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig986.31679.1prot_Ecto-sp8_S_contig986.31679.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig986 8338..15419 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145353.6885478-CDS-Ecto-sp8_S_contig986:8337..83821681145353.6885478-CDS-Ecto-sp8_S_contig986:8337..8382Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 8338..8382 +
1681145353.7031643-CDS-Ecto-sp8_S_contig986:9246..95961681145353.7031643-CDS-Ecto-sp8_S_contig986:9246..9596Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 9247..9596 +
1681145353.7163517-CDS-Ecto-sp8_S_contig986:10029..102011681145353.7163517-CDS-Ecto-sp8_S_contig986:10029..10201Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 10030..10201 +
1681145353.727892-CDS-Ecto-sp8_S_contig986:10567..107171681145353.727892-CDS-Ecto-sp8_S_contig986:10567..10717Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 10568..10717 +
1681145353.739701-CDS-Ecto-sp8_S_contig986:10881..110401681145353.739701-CDS-Ecto-sp8_S_contig986:10881..11040Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 10882..11040 +
1681145353.752236-CDS-Ecto-sp8_S_contig986:11259..113941681145353.752236-CDS-Ecto-sp8_S_contig986:11259..11394Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 11260..11394 +
1681145353.7645948-CDS-Ecto-sp8_S_contig986:12048..121561681145353.7645948-CDS-Ecto-sp8_S_contig986:12048..12156Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 12049..12156 +
1681145353.783507-CDS-Ecto-sp8_S_contig986:12371..124911681145353.783507-CDS-Ecto-sp8_S_contig986:12371..12491Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 12372..12491 +
1681145353.7967303-CDS-Ecto-sp8_S_contig986:12897..129811681145353.7967303-CDS-Ecto-sp8_S_contig986:12897..12981Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 12898..12981 +
1681145353.8084054-CDS-Ecto-sp8_S_contig986:13424..136131681145353.8084054-CDS-Ecto-sp8_S_contig986:13424..13613Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 13425..13613 +
1681145353.8198524-CDS-Ecto-sp8_S_contig986:14371..145191681145353.8198524-CDS-Ecto-sp8_S_contig986:14371..14519Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 14372..14519 +
1681145353.831913-CDS-Ecto-sp8_S_contig986:15168..154191681145353.831913-CDS-Ecto-sp8_S_contig986:15168..15419Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig986 15169..15419 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145353.844046-UTR-Ecto-sp8_S_contig986:15419..155071681145353.844046-UTR-Ecto-sp8_S_contig986:15419..15507Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig986 15420..15507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig986.31679.1

>prot_Ecto-sp8_S_contig986.31679.1 ID=prot_Ecto-sp8_S_contig986.31679.1|Name=mRNA_Ecto-sp8_S_contig986.31679.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=637bp
MGVDDEDESVLSDLRESIEEIEEENSHSDYSLEFDDDYEGSGHPRGAEQY
QRGGEEGEGSNGQQNLPSAVWSATGVGSEKQGGHQHQQRQRLQQEGRDQE
RTTRSRVLADDTTTIIADRNNSGGLQVPPKRWSTGRQAHDNETHQQDYMD
TTQTRNEPYSSTAAELGTMETKELLREERGDRGPSLPVQVLTLKARLDGL
LRAGHDGVDSGHHHTVTEALTSVTREHAALRECLGDVERELLTARRKVEQ
DAVSRLQAAQQKRARAEARRIRHFEQLGEARRTAAVAKAEAEALRARVAD
GATELRHTGDMLETARSAASAAQDRADQCQKEAAVAEDKAESLKEEMAHV
RVEIEEERRKASVAVRNAAEKMELCERKRELEVDAATRAAEARERAAEEQ
LKRLPEHQQQLLQAEKDRVVRWEERLAAEAASLQRREEAHKIDVEACRAQ
VRRMEAETRARVEEDASRERSTLTNARSAFERERGELLRRVAAAESAGQA
AIAEAASQTAEANEERRRVEAEKNALALRASMLAPQLAALEEGRATLEGC
QREAREESRRAKDKVCRALEMEAEVVGREAAVEVKWKEITTARRALKQVK
LGKDNNVDVQPQSWSTLPFLVGDCPIKLALTLHHTH*
back to top

mRNA from alignment at Ecto-sp8_S_contig986:8338..15507+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig986.31679.1 ID=mRNA_Ecto-sp8_S_contig986.31679.1|Name=mRNA_Ecto-sp8_S_contig986.31679.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7170bp|location=Sequence derived from alignment at Ecto-sp8_S_contig986:8338..15507+ (Ectocarpus species8 EcLAC_412)
ATGGGGGTGGATGACGAGGACGAATCGGTTTTGTCGGATCTCAGGGTGAG
TTTCGAAGGAAGTTAGTCGTGGTCCGTCACTGACTGACTGTCGAAATCAA
CGTCGGAGACGACACAAGGATTTCAAAGACGCCCCTCAAAGATATGGACG
TGTGGAATCCTCCTGTAGGTGTCAATGTGACTCTGCTATGCTTTTATTTC
CCCCATAGGTCGCCGTGTAGATTGGACTTCGCTTGCAATGCCTCAGGTGA
ACTACGTATGTAGTCTATTGTCTACTGCCGGGCGTCCAGAAAACAGTACG
CATACCGTGGGTGACACAAGATATCACACCCCCTCTGGACCGATTTCAAC
GCTCGACTACCTGTACAGCAGCACTCAAGAGGACATGCCAAACTCTAGGG
ATGCGTTTTCGGAAAGATCTCGACGAAGTGGTTTAACGCCGCCATTCTCG
GCACTGCCACTCTTTTTAGTCGAGGAGAACAATCGAGCTCTGAAAATGGG
TCGAAGGGGCTGTGATATCGTGTACTCCTTTTTTTTTTTTTTTTTTTTCC
TTCGCGCAGTTGCTTGGTGCTGTTGCTGTCCTTGCCCNNNNNNCTTCTCC
TCCACTTCTACCAGCTAGACGACCCAACCGGGGTCACATAGGAGGGGGGG
GTTGGACCCCCTCCTCCGTATGTCACCTACGGATAGTATATTTCCCAATA
GTCTACATGTGATATCGTGTTTGTCACCTACGGATAGACTACATACAGAG
AGGACACATGTCGTTTTCTCGTTCTTCTGTGCCGGAAGGTGTGAAAACTG
ACGCCCCAGATAAGCCCTTGCATAAACAAATGGGACGAGATACGCACACA
CCAACTACCGCCAGCCGACGTTCGGTTTCACTTTTCTCCTCCCTTTGCTG
TGCACACAGGAGAGCATAGAAGAGATCGAGGAGGAAAATAGTCATTCAGA
CTACAGCCTAGAGTTTGACGACGATTATGAAGGATCAGGACATCCAAGAG
GAGCCGAACAATACCAACGAGGAGGTGAAGAAGGGGAAGGTTCCAATGGC
CAGCAAAATTTGCCGTCTGCCGTGTGGTCAGCAACTGGTGTTGGATCGGA
AAAGCAGGGGGGCCACCAACACCAACAACGACAACGCTTGCAACAAGAGG
GACGGGACCAAGAACGGACGACACGAAGCCGCGTGCTCGCCGATGACACT
ACCACCATCATCGCGGACCGCAACAACTCAGGCGGGCTACAAGTTCCTCC
GAAAAGGTGGTTGTTGGCCTGGTCTTTTTATGCGAAGAAAAAAGACAACA
TGTATGCATGGTGTGCGCTATGTCCTCCTCCCTTGATGAAAGTCTTGGTT
TTACGCCGCAGAGCTCGTTGGTCCACATTGGAGTGTAACGGAAAGTACAG
CTTTCCAAATGGACCGTGATTTGACTGAGTTCGAAAATGGGCGAAGGGAG
CACCCAGCAGTCACACACAAGACGCGTAAGACGAGTCGGGAAGTGTTGGG
CAACAAGAACTCCGGTAGTTGGCACACAGAGCTTGAGTCCATACCATTCA
CGATCTTTTGCTGTTTACATACCCACCGTCACAGATCCAACCGGGGTTGG
AGCCCTTGTGATTACTACTGATTTTGCGGTCCGCTATTCTCGAAATGAAC
CATTGTCCCAGAGTCGCCGACCAACCCCCACCACGGCCGCAGGTCGACAG
GACGCCAAGCACACGATAACGAGACGCATCAGCAGGACTACATGGACACA
ACACAGACGAGGAACGAGCCCTACTCCTCAACGGCGGCAGAATTAGGAAC
CATGGAGACGAAGGAGCTACTACGTGAAGAGCGAGGGGATCGAGGACCCT
CCTTGCCCGTGCAGGTATCTCCCGTCGAAAGGGCTCCTTGTCACGAGCCG
CAAACATCATCATGTCTCGTTCACGGCCCGTACAGCAGTACATGTAAAAA
TCATGTATTGTTAATACCCTGCATGCAGCTGCACCCAGTGGTGTGTCACT
TAGAATTTTTACTACTCTCAAGGTCAACGTTTCCCTGTTGCATTCGACCA
GTGCTCAACAGGAGAGTTGGTTGGTTTTCTTAACGCTTGTCGGACGTCCA
CATTCTGGAACAATGCTTGCACTTGCGGCGAAGATTGTATCCAATGCTCT
TCGAATGACATCGGAACCATCCCGTTTTCTACATAACAGCCTTGCACGGT
GTTCTTCCCCCTGGGCTCGACGAACTTTAGGTCCTCACACTCAAAGCTCG
ACTGGACGGGCTGCTGCGGGCCGGACACGACGGCGTTGACAGCGGCCACC
ACCACACGGTCACCGAGGCTTTAACGTCGGTGACACGAGAGCACGCTGCT
CTCCGGGAGTGCTTGGGCGACGTTGAGCGGGTGAGCGAACGAGGCGCCTT
GGAGTCTCTCGGCGGCATGAAAAAAGGAGAATCGCCGATAAACACGTTGT
GTGCAAACTGTTGTCTTGGGAAGTCTGCCACCGCCCTCTTGCCCCGCCCT
CCTGATTTTTTCCTGCCATGTCTCCGGCCTTTCTTCGCGCACAGGAGCTG
TTGACAGCGAGGCGGAAGGTTGAGCAGGATGCGGTCTCGAGGCTACAAGC
AGCGCAACAGAAGAGGGCGCGGGCGGAAGCGCGGAGGATCAGACACTTCG
AGCAGCTGGGCGAGGCGAGGAGGACCGCGGCGGTAGCCAAGGCGGAGGCT
GAGGTACAGGAAAACCACTAAGCACGCCGAGGGCACGCGTGCAAGAACAA
CAGCAGTGTGCCAAAAATCCGTCGCATATGGTCAATGATAAGAGTCTTCT
TTGACGATCAAGAAAAAAGTGCCAGCTCCCGTGCCCGTCTGCAGCATTTT
TGTCGTCTGCCCCTCGAAAAAATTCAGTCTTGTACACTTACGCCTTCCCC
ACCCTTTCCGAACAAAAACCAGGCGTTGCGCGCAAGGGTAGCGGACGGAG
CGACGGAGCTCCGACACACGGGAGACATGCTGGAAACCGCACGATCCGCG
GCTTCAGCGGCGCAGGACCGGGCCGACCAGTGCCAGAAGGAAGCGGCCGT
GGCTGAGGTGGGGGGTGCTGCAACAGGGTTGATGCGGAGGGAAATGCAGA
ATGATGATTGGCCTTTGTAACTTGAATCAGAGCTGAGACCTAAGAGTAGC
GCCGAGATGCATAGGCGTTGAGTCGTTGATTTGCTCACATGCTCGTTGAA
TATGGAGTCCAGGAAGCGAAGTTTTAGAGGCCCTCGACGACAAAAACAAC
GATACTCCGGAAATTGTAGGAAATTTTCACTCCGCCTAGGTTCGAATTTT
GATTTTTGTAAGCTCGACATGGCTATCTTCACAGCGGAAACGCGCTAACA
TCGAAAACAGTAGTGACGCTGGGAAGATCTTGGTGGAGTTGGAGACGTCT
GACGATACTGTCCTGGAGGAACGACTTGTAGTGTCGAGATACCGAGACTC
GAAAACACACCAAGGGTGTACGGTACTACCTTGAGCAAACGTGCGGCAAG
GTGTAGTGCACTCGAACTCGCACCCGCATGCGCCCACTTTGACGGGGGAC
CCCGAGGCTCGTGCGAAGTACATCGCGCGAAGATGCCGAGGCTCGTCCCA
AACATGTTTTCGTCGGAATTCAAGACCTTGATTGCATGTTGGAGGGAAAG
GATGAATGTGTGTGGACAACGGTGTGAATCGGGCTTCCTGTGTGTCTCCC
ACCGCAACAAGGATAAAGCGGAGAGCCTTAAGGAAGAGATGGCGCACGTG
CGCGTGGAGATTGAGGAGGAGAGGAGGAAAGCTTCTGTCGCGGTCAGAAA
TGCGGCGGAGAAGATGGAGGTGGGACACGGGCCTGTTGGTGCGGTGTTTT
GGTTATTTTATTATCGTGTGTGTGTCTGTCTTGTTTGTGTTCGTACTGTC
TTTCAGGGCCTCGCGATTGATGCGACTCTCAGGCGGGGTTTTGTAGCAAG
CTCTCGCACACCCATGGTTCTCGGCTCTGCAAGTCTGCTTTGCTTCGCTC
GTTGTCCTTCCGGTTGCCTCTTGATGGTGCCAAGCTTTGCGAGAGAAAGC
GAGAGCTCGAAGTGGACGCCGCTACTCGAGCGGCAGAGGCGCGGGAGAGG
GCGGCGGAGGAGCAGCTCAAGCGCCTCCCCGAACACCAGCAACAGCTGCT
CCAGGTTGGTGTTGCCTATGATCGCGCTCGCGCGGGATTATTATAGACGT
CGAACCGTGGCCAGTCGACGAATTCGTCGACCTAAGGCGGTATGTTCTCT
GGGACTATTTTCCGACCACGGTATCGTGTCCATAACGAAGGCCGTTCGGA
GGCGATCAGACTAACAGCGAGGAGACCACGCGTGGCGGAGGCGCCGTTGT
GTGGAATACTGGCTCGCCAACTTCTGTGTGCCATGCACCTGTCAGGCGGG
TCATGTTTCAGTTCAGTTCTCTCGACAACGTCGATCGCGCACCGCGCCGT
TGCGCGCATGCTCGTGTAGGGCTGCTCGACCGCGGTCCTTTAGCTGCCAA
TAGTTCGTGTTGCCATCAATGACACTCGGTATCATATCAAATCGTGGGTT
TCGACCCCAGGCAGAAAAGGACCGCGTAGTGAGATGGGAGGAGCGCCTGG
CAGCCGAAGCCGCGAGTCTTCAGCGCAGGGAGGAGGCACACAAGGTGGAT
TGTCTACTGTTACTGCGCTTTGCGTATAGAATGTACATTTGACTGTAAAC
TTGTAGGGGCCAACTAATCGTTTGGAGGGAAACACGAAAGTGTGGAGCCC
TTTTTGTTGTTCTTGGGTTGATATTCAGGAGGTACTTCTTTCTGCCGCCG
TCTCATCTTTGCCGTATCACTTTTGTTGCGAAGAGTACCCTTTTTAATTG
TGGACGAGACAACTCAAACATCCTATCGATGCTTGATAGTGGTCTTCTTC
TCCGCCACCGCGTCCCACGTCCCCGTGCCTGTTTGGTTTGTCGAACACCC
CAACGCACTCCATCTGGAACTGCATCCATCGGTATAACGGTGCATGACAT
GCATGGTAATGCGCTTCGGCTGCGCACGAAATATGTTAACCCCTACCCCG
CGTCTACCGGTGCCAAAAAACCGTCCCTTCGATCCAGATTGATGTGGAAG
CGTGTCGAGCGCAGGTGCGCAGGATGGAGGCGGAAACCCGGGCCCGTGTT
GAAGAGGATGCCTCGAGGGAGCGGTCGACTCTGACCAACGCCAGGTCGGC
GTTCGAGAGGGAGAGGGGGGAGCTCTTGCGGCGTGTCGCGGCAGCCGAAT
CGGCCGGTCAGGCAGCGATAGCGGAGGTTAGTGTGTTTCCGTTCTCCGAT
GTTGTGTGTGTCATCGTTAAGGCACACCATTTGAATTAAAGCAATAGGCT
TGGGCTAGGATACGTGGGGATACGTGTAAGTCCACCGTGTTGTAGCATGT
GTCGAGCATATTCGTCACAACGGTGAAGGGAGGTTTGACTAGTTGGCGTT
AACCAAAAATTCTACTTAACACGCTTCCAACAGCCCGAGGCCCTTTTTGT
TTGGAGGTTGACCGTGTATCGAGCGGACTTATCTTTATGATATAAGTTAC
GAGGAATTTCGTACTGTTCGACGTTTATCTATTCCTAGGTGTTAGAAACA
GGACCCGGCCTCACGGACAAGTAGTCACAAGCACAAAACGCCGTTCTCGA
TACCGTTGCAATCGTCGACATTGAGACCGAGACACAAAAACTGAAAACCT
CAGCGAGTGGAACCCGGCCGATAGGGCACACCAAGCACGCGGCGGCTAGA
GGTGTTCCATGGAGTCATTTGTACTCCTAGCAAGGACATAGTGTCGCCGG
TACCGATAAAAGTAGCTGACCGAAAACATGGCCCTGGAAACGACTGCGTA
TGTAGCCTGACGCCGAAACTGGTGTGTGTGTAAGCCTCTAAGCAGAGGAC
TCGTTCAGGCCGAAACAAACGGAAGGCTGTTATGAAGGATGTGTTCAAAG
ATGGGTGGATTAAAGCCGCAGAAACACACAAAAGAAGCGGTTCGAAAATT
CCATGCGTGAATGCCTCCGAATCTTGGATTTTAGGCGGCGTCGCAGACGG
CAGAGGCGAACGAGGAGCGTCGGAGAGTCGAGGCCGAGAAGAACGCTCTA
GCGTTGAGGGCCTCGATGCTCGCGCCGCAGCTTGCTGCCCTGGAAGAAGG
GCGAGCGACGCTAGAAGGGTGTCAACGAGAAGGCGTGTGCTTTTGCTTAC
CCTGCCCTTTGCACGTGCTCGGCCACCACCACCTGTGGTATTCTCCGGCA
CGCTACTTGTCTCACCTCTTGAAATTTCTGAGAACGTTGCGACATGAAAA
TTTATTAAAAACTCAATCAGTTGCTACTTATTACGCGAGACTTGCGGGAT
CGGCGGGTTCGTTTGCAGAAAACGTACGTGGTGTCAACAACTAGTTGTTG
GCGGGGGTCCGCGGACAGGGTGTCCTTCAGAGTTGACCGGTGTCCGGGTA
GTGACCCTTGTTCCTTCAAGAGCGAGCGGTACGCGCTCTAGCGCTTTGGG
CCGCAACTTCAAGAAGAACCTCGATAACCGAATAGAAAGATGTCCACAGG
ATTCATGGTGATTCTGTGTGTTCCCTTTACGCACCCCTTCCCCGCCCCAC
CTCCCGAATCTTTGTGGATATTGTCTTCAAGCTGATGAGCACTTCTCCGT
GGGCCCAAGATACAGCCAATCGCGCCCCAGAGGCTAGCGAGCTAATTTAC
AGAGGTTCGGGTCGCCGCTTCATTTCCTCGCTGCTTCCTGCCTGACAAAA
CCCCTTGGTTTGTTCGTGCGTGCGTTGGGTGTTTGCCGGCGTTTACACCT
TCTGTGTTTTGTGATTCCGTGTCTTCCGAAGCGAGGGAAGAATCTCGTCG
TGCGAAGGACAAGGTCTGTCGCGCTCTGGAGATGGAAGCGGAGGTTGTAG
GTAGAGAAGCGGCGGTGGAAGTGAAGTGGAAGGAGATCACCACAGCCCGC
CGAGCGTTGAAGCAGGTCAAGCTAGGAAAAGACAACAACGTTGATGTACA
GCCCCAGTCTTGGTCTACTCTCCCATTCTTGGTCGGAGACTGTCCAATCA
AACTTGCCCTCACCCTTCACCACACGCATTAATACTATGAACCACACGAA
AGAAGGACCGAATCCCCAGACTTGGTTTCAAGCCTCAAACCCCCTTGATC
ATTGTGGAACGCTGCCCGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig986:8338..15507+

>mRNA_Ecto-sp8_S_contig986.31679.1 ID=mRNA_Ecto-sp8_S_contig986.31679.1|Name=mRNA_Ecto-sp8_S_contig986.31679.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1911bp|location=Sequence derived from alignment at Ecto-sp8_S_contig986:8338..15507+ (Ectocarpus species8 EcLAC_412)
ATGGGGGTGGATGACGAGGACGAATCGGTTTTGTCGGATCTCAGGGAGAG
CATAGAAGAGATCGAGGAGGAAAATAGTCATTCAGACTACAGCCTAGAGT
TTGACGACGATTATGAAGGATCAGGACATCCAAGAGGAGCCGAACAATAC
CAACGAGGAGGTGAAGAAGGGGAAGGTTCCAATGGCCAGCAAAATTTGCC
GTCTGCCGTGTGGTCAGCAACTGGTGTTGGATCGGAAAAGCAGGGGGGCC
ACCAACACCAACAACGACAACGCTTGCAACAAGAGGGACGGGACCAAGAA
CGGACGACACGAAGCCGCGTGCTCGCCGATGACACTACCACCATCATCGC
GGACCGCAACAACTCAGGCGGGCTACAAGTTCCTCCGAAAAGGTGGTCGA
CAGGACGCCAAGCACACGATAACGAGACGCATCAGCAGGACTACATGGAC
ACAACACAGACGAGGAACGAGCCCTACTCCTCAACGGCGGCAGAATTAGG
AACCATGGAGACGAAGGAGCTACTACGTGAAGAGCGAGGGGATCGAGGAC
CCTCCTTGCCCGTGCAGGTCCTCACACTCAAAGCTCGACTGGACGGGCTG
CTGCGGGCCGGACACGACGGCGTTGACAGCGGCCACCACCACACGGTCAC
CGAGGCTTTAACGTCGGTGACACGAGAGCACGCTGCTCTCCGGGAGTGCT
TGGGCGACGTTGAGCGGGAGCTGTTGACAGCGAGGCGGAAGGTTGAGCAG
GATGCGGTCTCGAGGCTACAAGCAGCGCAACAGAAGAGGGCGCGGGCGGA
AGCGCGGAGGATCAGACACTTCGAGCAGCTGGGCGAGGCGAGGAGGACCG
CGGCGGTAGCCAAGGCGGAGGCTGAGGCGTTGCGCGCAAGGGTAGCGGAC
GGAGCGACGGAGCTCCGACACACGGGAGACATGCTGGAAACCGCACGATC
CGCGGCTTCAGCGGCGCAGGACCGGGCCGACCAGTGCCAGAAGGAAGCGG
CCGTGGCTGAGGATAAAGCGGAGAGCCTTAAGGAAGAGATGGCGCACGTG
CGCGTGGAGATTGAGGAGGAGAGGAGGAAAGCTTCTGTCGCGGTCAGAAA
TGCGGCGGAGAAGATGGAGCTTTGCGAGAGAAAGCGAGAGCTCGAAGTGG
ACGCCGCTACTCGAGCGGCAGAGGCGCGGGAGAGGGCGGCGGAGGAGCAG
CTCAAGCGCCTCCCCGAACACCAGCAACAGCTGCTCCAGGCAGAAAAGGA
CCGCGTAGTGAGATGGGAGGAGCGCCTGGCAGCCGAAGCCGCGAGTCTTC
AGCGCAGGGAGGAGGCACACAAGATTGATGTGGAAGCGTGTCGAGCGCAG
GTGCGCAGGATGGAGGCGGAAACCCGGGCCCGTGTTGAAGAGGATGCCTC
GAGGGAGCGGTCGACTCTGACCAACGCCAGGTCGGCGTTCGAGAGGGAGA
GGGGGGAGCTCTTGCGGCGTGTCGCGGCAGCCGAATCGGCCGGTCAGGCA
GCGATAGCGGAGGCGGCGTCGCAGACGGCAGAGGCGAACGAGGAGCGTCG
GAGAGTCGAGGCCGAGAAGAACGCTCTAGCGTTGAGGGCCTCGATGCTCG
CGCCGCAGCTTGCTGCCCTGGAAGAAGGGCGAGCGACGCTAGAAGGGTGT
CAACGAGAAGCGAGGGAAGAATCTCGTCGTGCGAAGGACAAGGTCTGTCG
CGCTCTGGAGATGGAAGCGGAGGTTGTAGGTAGAGAAGCGGCGGTGGAAG
TGAAGTGGAAGGAGATCACCACAGCCCGCCGAGCGTTGAAGCAGGTCAAG
CTAGGAAAAGACAACAACGTTGATGTACAGCCCCAGTCTTGGTCTACTCT
CCCATTCTTGGTCGGAGACTGTCCAATCAAACTTGCCCTCACCCTTCACC
ACACGCATTAA
back to top