mRNA_Ecto-sp8_S_contig9853.31673.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9853.31673.1
Unique NamemRNA_Ecto-sp8_S_contig9853.31673.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: D8LF03_ECTSI (Acetyl-coenzyme A synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF03_ECTSI)

HSP 1 Score: 922 bits (2384), Expect = 0.000e+0
Identity = 441/442 (99.77%), Postives = 442/442 (100.00%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIIS+YDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV
Sbjct:  190 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISDYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 631
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A835ZK08_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK08_9STRA)

HSP 1 Score: 711 bits (1836), Expect = 1.290e-252
Identity = 333/443 (75.17%), Postives = 374/443 (84.42%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGK-RDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            +GAPHSVVFAGFSA+ALRDRI++A+ K+V T DEG+RGGKT+ LK IVD A     CV+ V V   T A VP    RDV MSE+LP MRPYCPCE MDSED LFILYTSGSTG+PKG+AHTTAGYLL+T +TTKH F L+EGDV+ACVADVGWITGHSYIVYGPL+NG TSLMFESTP+YP+HGRYWD+VQ HKV QFYTAPTAIRALM  GPEI   YDLSSLRVLG+VGEPINPEAWRWYNEHVGKGKC IVDT+WQTETGGH+M PL  +TP KPGSC FPFFG+EP VL+ + G E+TGNDVEGVLA KR WPS+ARTVYGDH+RY+ VY+NPYKGYYFTGDGC RD DG+YWITGRVDDVLNVSGHRIGTAEVESALV H +VSEAAVVGFP+P+KGQ +CCYVT  +   ES +L+ EL  QV  HIG FA P +IV
Sbjct:  161 IGAPHSVVFAGFSADALRDRILNASCKFVMTADEGKRGGKTIPLKRIVDAACSGCPCVKTVFVFKNTCADVPFAATRDVWMSELLPNMRPYCPCEAMDSEDTLFILYTSGSTGQPKGLAHTTAGYLLHTALTTKHVFDLKEGDVYACVADVGWITGHSYIVYGPLINGTTSLMFESTPLYPDHGRYWDLVQTHKVNQFYTAPTAIRALMRFGPEITEKYDLSSLRVLGTVGEPINPEAWRWYNEHVGKGKCSIVDTWWQTETGGHLMTPLPGITPMKPGSCCFPFFGVEPVVLDPKDGHELTGNDVEGVLAMKRAWPSIARTVYGDHERYLSVYMNPYKGYYFTGDGCRRDKDGYYWITGRVDDVLNVSGHRIGTAEVESALVAHASVSEAAVVGFPEPVKGQGLCCYVTLTAKAVESGDLVAELRMQVRQHIGAFATPDVIV 603
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7S3XKN4_HETAK (Acetyl-coenzyme A synthetase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKN4_HETAK)

HSP 1 Score: 674 bits (1739), Expect = 1.450e-238
Identity = 322/444 (72.52%), Postives = 366/444 (82.43%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGA-KVPMGKR-DVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            LGAPHSVVFAGFSAEALRDRI D  SKWVFTTD+G RGG+ L LK IVDKAVE A CVEKV + + TGA +VP  +  DV+M E+    RPYCP E MDSEDLLF+LYTSGSTGRPKG+AH TAGYL YT  TT+++F L+EGDVFACVADVGWITGHSYIVYGPLVNGAT+LMFESTPMYP+HGRYWD+VQRHK+TQFYTAPTAIRALM  GPE +  YD SSLRVLG+VGEPINPEAWRWY+  VG+G+C IVDTFWQTETGGHV  P+  V+  K GSCSFP  GIE A+L+ Q+G E+ GN VEGVL  +RPWPS+ARTVYGDH RY+ VY+  Y GYYFTGDG  RD  G YWITGRVDDVLN SGHR+GTAE+ESALVLH AVSEAAV+GFP P+KGQ ICCYVT V G+ ++P+L KEL  QV + IGPFA P ++V
Sbjct:  123 LGAPHSVVFAGFSAEALRDRINDGQSKWVFTTDQGLRGGRVLELKKIVDKAVEGAPCVEKVFMFSRTGAAEVPFREGVDVRMDELARAQRPYCPAEPMDSEDLLFLLYTSGSTGRPKGLAHATAGYLAYTAFTTQNSFQLQEGDVFACVADVGWITGHSYIVYGPLVNGATTLMFESTPMYPDHGRYWDMVQRHKITQFYTAPTAIRALMRFGPEKVKEYDRSSLRVLGTVGEPINPEAWRWYHGVVGEGRCTIVDTFWQTETGGHVGTPIPGVSTLKAGSCSFPSNGIEFAILDPQSGRELEGNGVEGVLCIRRPWPSVARTVYGDHPRYLAVYMLAYPGYYFTGDGARRDETGHYWITGRVDDVLNTSGHRLGTAEIESALVLHAAVSEAAVIGFPHPVKGQGICCYVTLVEGFQDTPDLEKELKNQVRSTIGPFATPDLVV 566
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: K8YU91_NANGC (Acetyl-coenzyme A synthetase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU91_NANGC)

HSP 1 Score: 665 bits (1717), Expect = 1.880e-235
Identity = 316/442 (71.49%), Postives = 363/442 (82.13%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVP-MGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMI 1323
            +GAPHSVVFAGFSAEALRDRI D NSKWV TTDEG+RGGKTL LK IVDKA+++A  V+   V   TGA V  +  RDV+MSE++ + RPYCP ETMDSEDLLFILYTSGSTG+PKGVAHTTAGYLL+  MT K  F L+EGDV+ACVAD GWITGHSYIVYGPLVNGAT+L+FES P YPNH RYWD++QRH+VTQFYTAPTAIRALM  G E I+++D SSLRVLGSVGEPINPEAW+WY EHVG  +C IVDT+WQTETGGH+  PL  VTP KPGSC+ PF+G+E A+++  TG+E+ GNDVEGVL  KRPWPS+ RTV+GDH RY+ VY+ PYKGYYFTGDG  RD+DG+YWITGRVDDVLN SGHRIGTAEVESALV H AVSEAAVVGFP  +KG+ ICC+VT   G  ESP L KEL + V   IG FA P ++
Sbjct:  110 IGAPHSVVFAGFSAEALRDRINDTNSKWVMTTDEGKRGGKTLPLKQIVDKALKEAPSVQHCFVFERTGAPVDWVPGRDVKMSEVMAQQRPYCPAETMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLFAAMTHKTVFDLQEGDVYACVADCGWITGHSYIVYGPLVNGATTLLFESIPTYPNHCRYWDLIQRHRVTQFYTAPTAIRALMRYGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHVGNARCTIVDTWWQTETGGHLASPLPGVTPMKPGSCTLPFYGVELALIDPSTGQELAGNDVEGVLCVKRPWPSMTRTVFGDHARYLTVYMQPYKGYYFTGDGARRDADGYYWITGRVDDVLNTSGHRIGTAEVESALVGHAAVSEAAVVGFPHAVKGEGICCFVTLREGVFESPALEKELKQAVRDAIGAFATPDIV 551
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7S1UH83_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH83_9STRA)

HSP 1 Score: 634 bits (1636), Expect = 3.380e-222
Identity = 306/452 (67.70%), Postives = 355/452 (78.54%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVE-------DADCVEKVLVITATGAKVPMGK-RDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGND--VEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            LGAPH+VVFAGFSAEAL  RI DA+SKW+FTT+EG+RGG+TL LK+IVD A+        D + V+ V V   T A+V M   RD+    +    R YCP E  DSED LF+LYTSGSTG+PKG+AH+TAGYL+Y  MTTK++F + EGD FACVAD+GWITGHSYIVYGPLVNG T+LMFESTP YP+ GRYWDVVQRH++TQ YTAPTAIRALM  G E +  YD SSLRVLGSVGEPINPEAWRWY   VG+G+C I DTFWQTETGGH+  PL  +TP KPGSCSFP +GI+ AVL+ QTGEE+T  D  VEGVL  +RPWPS+ART+YGDH+R+++VY+ PY G+YFTGDGC RD DGFYWITGRVDDVLN SGHR+GTAEVESALV H + +EAAVVG P  IKGQ ICCYV   +G  ESPEL+KEL   V T IGPFA P MIV
Sbjct:  167 LGAPHAVVFAGFSAEALAQRIEDAHSKWIFTTNEGKRGGRTLQLKAIVDDALHKVADAMGDQNPVQHVFVCKRTDAEVHMTPGRDIDFDALAAGERGYCPAEECDSEDTLFVLYTSGSTGKPKGIAHSTAGYLVYAAMTTKNSFDIREGDRFACVADIGWITGHSYIVYGPLVNGTTTLMFESTPTYPDPGRYWDVVQRHQLTQLYTAPTAIRALMRYGDEPVKKYDRSSLRVLGSVGEPINPEAWRWYYHVVGEGRCTIADTFWQTETGGHLATPLPGITPMKPGSCSFPCYGIDFAVLDPQTGEELTATDEDVEGVLCVRRPWPSVARTIYGDHQRFLNVYMKPYNGFYFTGDGCRRDKDGFYWITGRVDDVLNTSGHRLGTAEVESALVAHASCAEAAVVGMPHDIKGQGICCYVILRAGVEESPELVKELRLAVRTAIGPFATPDMIV 618
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7S1Z6D6_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z6D6_9STRA)

HSP 1 Score: 622 bits (1604), Expect = 1.220e-217
Identity = 290/447 (64.88%), Postives = 344/447 (76.96%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADC---VEKVLVITATGA--KVPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            +GA HSVVFAGFSA+A+ DRI DA SKWV T D G+RGG+ L LK I+D A+   DC   VE V V    GA   V   ++DV  +E++   RPYCPCE MDSED+LFILYTSGSTGRPKGV HTT GY L+   TT   F L++GDV+ACVAD GWITGH+YIVYGPL+NG  + MFESTPMYP++GRYWD+VQRHK++ FYTAPTAIR+LM  G E    YDLSSLR+LG+VGEPINPEAWRWY E +G   C +VDT+WQTETGGHV+  L  +TP KPGSC+ PF+GI+  VL+  TG E+ GN ++GVLA ++PWP + RT  GDH+RY++VY+ PY GYYF GDGCHRD DG+ WITGRVDDVLNVSGHRIGTAEVESALV HPAV++AAV+GFP  IKGQ ICCY T   GY ES +L+KEL   V T IGPFA P MI+
Sbjct:  152 IGAVHSVVFAGFSADAIADRICDARSKWVVTADGGKRGGRNLPLKQIIDTAISKGDCKDIVEAVFVFEHAGAGGDVMKMEKDVAFNELIAAQRPYCPCEWMDSEDVLFILYTSGSTGRPKGVLHTTGGYTLFAMHTTATTFDLKKGDVYACVADAGWITGHTYIVYGPLLNGMQTFMFESTPMYPDNGRYWDMVQRHKISVFYTAPTAIRSLMRFGDEAPKKYDLSSLRILGTVGEPINPEAWRWYYEIIGSSNCSVVDTYWQTETGGHVITNLPGITPMKPGSCTLPFYGIDTVVLDPATGLEIEGNGIDGVLAIRQPWPGVTRTCLGDHERYLNVYMKPYPGYYFPGDGCHRDKDGYIWITGRVDDVLNVSGHRIGTAEVESALVAHPAVAQAAVIGFPHDIKGQGICCYTTLTVGYEESDDLIKELRLAVRTSIGPFATPDMII 598
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7R9U0Y9_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0Y9_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 1.320e-217
Identity = 295/452 (65.27%), Postives = 354/452 (78.32%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVE-------DADCVEKVLVITATGAKVPM-GKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGND--VEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            +GA HS+VFAGFSAEAL +RI+DANS W+FTT+EG+RGG+T+ LK+I D+A+        D D V KV V   T  +VPM   RD+ + E++   R YCP E  DSED LFILYTSGSTGRPKG+AH+TAGYL Y  +T K  F L +GDV+AC++D+GWITGHSYIVYGPLVNG T++MFESTP+YP+ GRYWDVVQRH +TQ YTAPTAIRALM  G + +  YD SSLR+LGSVGEPINPEAWRWY E VG+ +C IVDT+WQTETGGH+  PL   TP KPGSCSFPFFGI+ A+L+ QTGEE+T  +  VEGVLA +RPWPS+ART++GDH+R+++VY+  Y G+YFTGDG  +D+DGFYW+TGRVDDVLN SGHR+GTAEVESALV H AVSEAAV+G P  IKGQ ICCYV    GY ES EL K+L   V   IGPFA P +IV
Sbjct:  134 IGATHSLVFAGFSAEALAERIIDANSPWLFTTNEGKRGGRTIPLKAIADEALNKVHNRLGDQDPVRKVFVSKRTETEVPMVPTRDIDLHELIRNERGYCPAEDCDSEDTLFILYTSGSTGRPKGIAHSTAGYLTYAALTCKKVFDLRDGDVYACLSDLGWITGHSYIVYGPLVNGTTTVMFESTPLYPDAGRYWDVVQRHGITQLYTAPTAIRALMRFGEDPVKKYDRSSLRILGSVGEPINPEAWRWYYEVVGEKRCTIVDTYWQTETGGHIGTPLPGTTPMKPGSCSFPFFGIDFAILDPQTGEELTNTEEEVEGVLAVRRPWPSVARTIWGDHERFLNVYMRAYSGFYFTGDGARQDADGFYWVTGRVDDVLNTSGHRLGTAEVESALVAHAAVSEAAVIGMPHDIKGQGICCYVILTHGYEESAELTKQLRLAVREAIGPFATPDLIV 585
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7S2R786_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R786_9STRA)

HSP 1 Score: 621 bits (1601), Expect = 4.900e-217
Identity = 297/443 (67.04%), Postives = 344/443 (77.65%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGK-RDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            +GA HSVVFAGFSAEALRDRI  A+SKWVF  DEG+RGG+TL LK+IVD+A +  D V KV V   TGAKV   + RD+ M E++   RPYCP E MDSEDL+FIL+TSGSTG+PKGVAH+TAGYLLY  MTTK++FGL  GDV ACVAD GWITGHSYIVYGPL NG T++MFES P YP+HGRYWD+VQRH+VT FYTAPTAIRALM  G + +  YD SSLRVLG+VGEPINPEAW+WY + VG+GKC I DT+WQTETGGH+M PL   TP KPGSCS PFFG++P V++AQTGE   GN +EGVL  + PWP + RT + DH+RYM  Y+  Y G+YFTGDGC RD DGFYWITGRVDDVLN SGHRIGTAEVE+A+  H    EAAVVG P  IKG+ ICCYV  V G  ES E+LK L  Q+   IGPFA P  I+
Sbjct:  166 IGAIHSVVFAGFSAEALRDRIKYADSKWVFCADEGKRGGRTLALKNIVDEACDGCD-VNKVFVFRRTGAKVNWVEGRDLYMEELMAAERPYCPPEWMDSEDLMFILFTSGSTGKPKGVAHSTAGYLLYAAMTTKYSFGLRPGDVHACVADCGWITGHSYIVYGPLANGVTTVMFESVPTYPDHGRYWDLVQRHQVTSFYTAPTAIRALMRFGDDKVKEYDRSSLRVLGTVGEPINPEAWQWYFDVVGEGKCSISDTYWQTETGGHLMTPLPGKTPMKPGSCSLPFFGVQPVVVDAQTGEIKQGNGIEGVLCIREPWPGIMRTCFRDHERYMQTYMKVYDGFYFTGDGCRRDEDGFYWITGRVDDVLNCSGHRIGTAEVEAAVCQHEHCVEAAVVGVPHEIKGEGICCYVILVPGVEESDEVLKGLRNQIRQVIGPFATPDFII 607
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A7S4K2B8_9STRA (Acetyl-coenzyme A synthetase n=5 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2B8_9STRA)

HSP 1 Score: 620 bits (1598), Expect = 1.770e-216
Identity = 288/445 (64.72%), Postives = 345/445 (77.53%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADC---VEKVLVITATGAK-VPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMI 1323
            +GA HSV+FAGFSA+A+ DRI  ++S+WV T D G+RGG+ L LK I D A+   DC   V+KV V   TG + V +  RDVQ   ++   RPYCPCE MDSED LFILYTSGSTG+PKG+ HTT GY +Y   TT   F L++ DV+ACVAD GWITGH+YIVYGPL+NGA++ MFESTPMYP++GRYWD+++RHK+T FYTAPTAIR+LM  G E    YDLSSLR+LGSVGEPINPEAWRWY E +G  KC +VDT+WQTETGGHV+  L  VTP KPGSC+ PF+GI+  VL+ +TG+E+ GN VEGVLA K+PWP + RT  GDH+RY+ VY+ PY GYYFTGD C RD DG+ WITGRVDDVLNVSGHRIGTAEVESALV HPAV++AAV+G+P  IKGQ ICCY T   GY ES EL+KEL  +V T IGPFA P +I
Sbjct:  170 IGAAHSVIFAGFSADAIADRITSSSSRWVVTADGGKRGGRNLPLKQICDTAIAKGDCAKIVQKVFVFEHTGPEDVQLHDRDVQFDSLIESQRPYCPCEWMDSEDTLFILYTSGSTGKPKGLVHTTGGYCMYALQTTAVTFDLKKTDVYACVADAGWITGHTYIVYGPLLNGASTFMFESTPMYPDNGRYWDMIERHKITVFYTAPTAIRSLMRFGDEAPKKYDLSSLRILGSVGEPINPEAWRWYYEVIGNSKCAVVDTYWQTETGGHVVTNLPGVTPMKPGSCTLPFYGIDTVVLDPRTGKEIEGNGVEGVLAIKQPWPGMTRTCLGDHERYLAVYMTPYPGYYFTGDACKRDEDGYIWITGRVDDVLNVSGHRIGTAEVESALVGHPAVAQAAVIGYPHDIKGQGICCYATLTVGYDESDELVKELRTEVRTSIGPFATPDII 614
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Match: A0A024UB77_9STRA (Acetyl-coenzyme A synthetase n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UB77_9STRA)

HSP 1 Score: 619 bits (1596), Expect = 2.450e-216
Identity = 295/442 (66.74%), Postives = 344/442 (77.83%), Query Frame = 1 
Query:    1 LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMGKRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKCHIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEVTGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRDSDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIKGQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV 1326
            +GA HS+VFAGFS++ALRDRIVDA SKWVF  DEG+RGG+TL LK  VD+A++  + VEKV V            ++V M+E+LP+MRPYCP   MDSEDL+FILYTSGSTG+PKGVAHTT GYL Y  +T K+ F L E DV+ACVAD GWITGHSYIVYGPL NGAT++MFESTP+YP   RYWD+VQR+K+TQFYTAPTAIRALMS G   +  YDLSSLR+LGSVGEPINPEAWRWY E VGK +C IVDT+WQTE+GGH+   L   TP K GSC  P+FG+E A+LN Q GEEV GN+VEG L  K PWP LARTVYGDH RY+ VY+ P+ GYYFTGDG  RDSDGFYWITGR+DDVL  SGHRIGTAEVESALV H  V+EAAVVG P  +KG+ ICC+VT +     SP++ +ELVKQV   IG FA P +IV
Sbjct:  160 IGAVHSIVFAGFSSDALRDRIVDAKSKWVFIADEGKRGGRTLQLKKTVDEAIKGLNFVEKVFVFKRATTPCVTSDKEVDMNELLPKMRPYCPAVWMDSEDLMFILYTSGSTGQPKGVAHTTGGYLTYAHVTAKYTFDLHEDDVYACVADCGWITGHSYIVYGPLSNGATTVMFESTPLYPYPSRYWDLVQRYKITQFYTAPTAIRALMSHGANKVDGYDLSSLRILGSVGEPINPEAWRWYYEVVGKKQCMIVDTYWQTESGGHLGTGLPGATPMKAGSCGLPYFGVEFALLNDQ-GEEVLGNNVEGRLCIKNPWPGLARTVYGDHSRYLSVYMKPHPGYYFTGDGARRDSDGFYWITGRIDDVLCTSGHRIGTAEVESALVAHNVVAEAAVVGVPHRVKGEGICCFVTLIYSVEASPQIEQELVKQVRHVIGAFASPDVIV 600
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9853.31673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF03_ECTSI0.000e+099.77Acetyl-coenzyme A synthetase n=2 Tax=Ectocarpus Ta... [more]
A0A835ZK08_9STRA1.290e-25275.17Acetyl-coenzyme A synthetase n=1 Tax=Tribonema min... [more]
A0A7S3XKN4_HETAK1.450e-23872.52Acetyl-coenzyme A synthetase n=1 Tax=Heterosigma a... [more]
K8YU91_NANGC1.880e-23571.49Acetyl-coenzyme A synthetase n=3 Tax=Monodopsidace... [more]
A0A7S1UH83_9STRA3.380e-22267.70Acetyl-coenzyme A synthetase n=1 Tax=Phaeomonas pa... [more]
A0A7S1Z6D6_9STRA1.220e-21764.88Acetyl-coenzyme A synthetase n=1 Tax=Ditylum brigh... [more]
A0A7R9U0Y9_9STRA1.320e-21765.27Acetyl-coenzyme A synthetase n=1 Tax=Pinguiococcus... [more]
A0A7S2R786_9STRA4.900e-21767.04Acetyl-coenzyme A synthetase n=1 Tax=Rhizochromuli... [more]
A0A7S4K2B8_9STRA1.770e-21664.72Acetyl-coenzyme A synthetase n=5 Tax=Odontella aur... [more]
A0A024UB77_9STRA2.450e-21666.74Acetyl-coenzyme A synthetase n=11 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9853contigEcto-sp8_S_contig9853:1..7077 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score923.3
Seed ortholog evalue4.2e-266
Seed eggNOG ortholog2880.D8LF03
Preferred nameACSS1
Model size1326
KEGG rclassRC00004,RC00012,RC00043,RC00070,RC02746,RC02816
KEGG koko:K01895
KEGG ReactionR00235,R00236,R00316,R00926,R01354
KEGG Pathwayko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00357
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001302,GO:0003674,GO:0003824,GO:0003987,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006066,GO:0006067,GO:0006069,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006325,GO:0006464,GO:0006473,GO:0006475,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015976,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016054,GO:0016208,GO:0016405,GO:0016569,GO:0016570,GO:0016573,GO:0016874,GO:0016877,GO:0016878,GO:0016879,GO:0016880,GO:0016999,GO:0017000,GO:0017001,GO:0017076,GO:0017144,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019413,GO:0019438,GO:0019538,GO:0019541,GO:0019542,GO:0019637,GO:0019654,GO:0019693,GO:0019752,GO:0030554,GO:0031224,GO:0031974,GO:0031981,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034308,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0048869,GO:0051186,GO:0051188,GO:0051276,GO:0051790,GO:0055086,GO:0055114,GO:0070013,GO:0071616,GO:0071704,GO:0071840,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615
Exons10
EggNOG free text desc.synthetase
EggNOG OGsCOG0365@1,KOG1175@2759
EC6.2.1.1
Cds size1326
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9853.31673.1prot_Ecto-sp8_S_contig9853.31673.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9853 1..7077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145353.2088008-CDS-Ecto-sp8_S_contig9853:0..661681145353.2088008-CDS-Ecto-sp8_S_contig9853:0..66Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 1..66 +
1681145353.2251995-CDS-Ecto-sp8_S_contig9853:1835..19791681145353.2251995-CDS-Ecto-sp8_S_contig9853:1835..1979Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 1836..1979 +
1681145353.2354217-CDS-Ecto-sp8_S_contig9853:2594..26811681145353.2354217-CDS-Ecto-sp8_S_contig9853:2594..2681Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 2595..2681 +
1681145353.2454736-CDS-Ecto-sp8_S_contig9853:3231..34851681145353.2454736-CDS-Ecto-sp8_S_contig9853:3231..3485Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 3232..3485 +
1681145353.2608008-CDS-Ecto-sp8_S_contig9853:3892..40731681145353.2608008-CDS-Ecto-sp8_S_contig9853:3892..4073Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 3893..4073 +
1681145353.2809806-CDS-Ecto-sp8_S_contig9853:4639..47711681145353.2809806-CDS-Ecto-sp8_S_contig9853:4639..4771Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 4640..4771 +
1681145353.2946532-CDS-Ecto-sp8_S_contig9853:4981..51311681145353.2946532-CDS-Ecto-sp8_S_contig9853:4981..5131Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 4982..5131 +
1681145353.3052247-CDS-Ecto-sp8_S_contig9853:5780..58941681145353.3052247-CDS-Ecto-sp8_S_contig9853:5780..5894Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 5781..5894 +
1681145353.3205647-CDS-Ecto-sp8_S_contig9853:6413..65231681145353.3205647-CDS-Ecto-sp8_S_contig9853:6413..6523Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 6414..6523 +
1681145353.3346071-CDS-Ecto-sp8_S_contig9853:6989..70771681145353.3346071-CDS-Ecto-sp8_S_contig9853:6989..7077Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9853 6990..7077 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9853.31673.1

>prot_Ecto-sp8_S_contig9853.31673.1 ID=prot_Ecto-sp8_S_contig9853.31673.1|Name=mRNA_Ecto-sp8_S_contig9853.31673.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=442bp
LGAPHSVVFAGFSAEALRDRIVDANSKWVFTTDEGRRGGKTLHLKSIVDK
AVEDADCVEKVLVITATGAKVPMGKRDVQMSEMLPRMRPYCPCETMDSED
LLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADV
GWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTA
PTAIRALMSCGPEIISNYDLSSLRVLGSVGEPINPEAWRWYNEHVGKGKC
HIVDTFWQTETGGHVMLPLANVTPTKPGSCSFPFFGIEPAVLNAQTGEEV
TGNDVEGVLAFKRPWPSLARTVYGDHKRYMDVYLNPYKGYYFTGDGCHRD
SDGFYWITGRVDDVLNVSGHRIGTAEVESALVLHPAVSEAAVVGFPDPIK
GQAICCYVTFVSGYTESPELLKELVKQVATHIGPFARPGMIV
back to top

mRNA from alignment at Ecto-sp8_S_contig9853:1..7077+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9853.31673.1 ID=mRNA_Ecto-sp8_S_contig9853.31673.1|Name=mRNA_Ecto-sp8_S_contig9853.31673.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7077bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9853:1..7077+ (Ectocarpus species8 EcLAC_412)
CTGGGCGCCCCTCACAGCGTGGTGTTCGCTGGTTTCAGCGCTGAGGCCCT
GCGAGACCGCATCGTGGTGAGTGAGGAAGGCCGTCAAGATGGATGTGCTT
TGGGTTGGGGGGCGCTTCTGGCGAAGAAGGAATAGGCCAGCCTTGCCGTG
GCTGCCTGCGTGTCAACGGTTCCCTTGGCTCTTATCCTTGGTGTCCCGGC
TGTTAAGGTCTGTCTGCCGCTGAGAAGGGGGGAGTTCTCTCCTGTAGTTT
TTGGGCATGCGGTTCGGTAGGCGAAACTTGGTCGGATCAGAAAATTCGTC
GGACTAATTACCGAGCACCGTTGTCGGGATTGTGCACTACGCCGATTTTG
GCATCAAGTTGCGAAGGCTCTACAGCAGTATGGCGGACTGACATTAACTT
TGGCGTGTGCGGCTCTCCTGCTTGACCCCTGCTGACTATAGTACCAAGTT
ACCATCAACCACCCTCTACAATCGCGTATGCCCTTGGCTTCGCGGCTGCT
GATCCACATCAGTGGCCGAGATTCCTGCTCATTGTTGCCGTCGTCGCAAG
TGGTGGATTCAGCACTTTTTCTTCCGACCCTCGTTTTTTTATTTGTTTTG
TATTTTGCGCTGGATCGCCCAAAGACGCTCTGTGACACGAGTCTATTAGT
GGCTCCAGGCCCCTGCTATTTATACCTCTTGTGCTTGAAGTTGGCGAGTG
CTCTTCCAACACCGTGTTGTTCCCAGACAACGTGTGTTTGTGGTAGAAGT
GGCACGCAGCGTTGGACAGCGTCGTATTTCTGTACAACTCTCGGATGCAA
CTTGTCCACACTGCAACTGCAACAGACCGCCACCCTACGACCTTAGTAAG
AAGAGGGGTGGATCTATCTGACGGTAGCCGAGGGAGCTTCGTCCTTTGTT
GATTTCGCACCCAGTCGTTGTAACTCTGCGGCATCTGCGTGAGCATTGGC
GAAGATCCGTCAAGTCACTTGTGCGATCTCTGGCATTTTTTTCCGTCGCT
ATCGCCGTCTGGGCTTTGTTGACGACCTTAAGAGCACCAACAGAATTAAC
GATATGCCGCAAACGCGTACGGTAGTAGTTGAAACCGCCACGGTCATTTT
TTAGAAAATTGTATACCTCGTACTGCACAGTTACAGAAAGACTAGCCGAG
GTATATGGTTATGTACCATGTCGCCTGTTTTCGTGCTTCGGGACATATTT
CGCTGGCGGAAGCGAGTCTCGTCTCACGGCTCCTTCTCAGGGGCACAGTT
CCTTCTCAGTGGCACGCAGGGGGTTCGTCGGTACATTTTCCGCGCACGCT
CGAGGACCGCCTGCCACCCGTGGCGCGTGTGCTTGACGCCCAAAGTTGAA
AAAACTGGCTCTATATCCCGGGGACGTGTTCCGCGCGAAGAAACCCTTCG
TAAGGAATAATTACAAACTGCTTCTCACAATCAGGAAGTTTTGATGCCTG
CGCAATGGACACAAGTCCCACAGACCACGGGCAACACGAAAACGTATGAG
CGAGTGATCAAACGCAGCGGATCACAGCAATAGGACCTGCAGCAAAGACG
CCGTTAGCGTAAAAGCACACACTCACGCACACGCGAAAAGTCACGGCGAG
AAAAAAGCATGCACCGCACATGATGCAAATTCCGGAAAAATTCTGCAGGT
TGTACACCAAACCGGCACTACCGAACGCCATGACGTTGAGATGCAACGAT
GCAACCGCGATGACATTGGCCATGTCCTCTTGCATCGTCGCCCCCGGGAG
GCAAGCCGCCTAACTAACTCTCCAAGGAAGCCTTGGTAACCACAGCAGTA
TTTGTTTGTTTTCCTTTGAATCACTACCGCAATAGGACGCCAACAGCAAG
TGGGTGTTCACGACGGATGAGGGGAGGAGGGGGGGCAAGACCCTGCACCT
CAAGAGCATCGTCGACAAGGCCGTGGAGGACGCTGACTGCGTGGAAAAGG
TCTTGGTCATCACTGCCACAGGGGCCAAGGTCAGACAAGAGGGAGGCTGA
GAGGGAGAGGGAGACAACAGCAGTACTCCCCCCCCATGAGATGGCTGATT
ATCCCCCCCCTCCATGGCGGTTGTTTACCGCCTCTTTTTATCGAAAGGAG
CATTTAGGTTCAGGCATTTACTTGGCGACTGTATCGCAAAGTTTCCGTCT
TAGAGAAGGAATCAGGCCCTCATAAGCCCTGCGAGCTTTCTCCCCAATCG
CCGATGCCCATCACGCCCGGAGGAACTTGGTTTTCGCCGAAATTTTTGCC
GCGCTGCGGTCAAGCGGGGTTGGTGCGTGCGTACCATGACCGATCGTGCG
ACATGGGGGGACAGCTCTCGCTCTAGGTCTACCCCTCCCATAAATGCAGG
AACTGGCACGCGGTACAGAAAGTCTACGCGCAACGAAATAGTGGCACCAC
ATCCCGCCAAGAGCAGACTTGAGAGGCGCTGCTACCGTTGGTAGTCGTAG
TCGAAGAGCAGCGGGGACGGCCTGACATTGCTTGCTTCCTCATTCTATTG
TGGCTGCCCAATGCGTTTTATGGTCTCGACACGGCTGTGCTTGTTGTGCT
GGCGTGTGTTGTTGCTGCTGCTTTTTTGGGGGGGTATCTGGCAGGTTCCG
ATGGGGAAGCGCGACGTGCAGATGTCGGAGATGCTCCCGCGCATGAGACC
CTACTGCCCGTGCGAAACGATGGACTCAGAGGTACGCTGCTTTGGAAACG
TTCTCGCGACGGGGGACTTAACTCACACGGGGAAATCGAACGCGTTCATA
CGCCCGGCGTGATGATTCTGAGTCGGGGTTGTTGTTCTAATGTCATATTT
ATGGTAGAGACCGCCCTCTGTGCTGGTGTTGCAACGCCGCCATTGTCGGC
ACCGCCATTCTTTTCTCCTGTGGAGTAAACGGGCTCTGAAAATGGGTCCA
CAGTGTGGGCGATATCATATTTCACCTGCGGTACGCATCTTTCAGCCGCC
ACGACTGACTGCCCTCTGCTGCAGTCGCCGCGATGTCCACCCCTCCGTCG
AGAGCGCTGCCAGCTGGATGCGTCTCTCACCCGTTACATCGGAACAATGG
CATGCCGGCGGGCTCTCAAGTCTGCACCGATTTATGACATGAAAACAACG
ATAGATCGCGGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAG
CAACAGCAACAACAATAACCAACGCCCCCTTACCCCCCGTTCCGTCTGCC
GTAACGACAACACCGACAACAACAACAACAGGACCTCCTCTTCATCCTGT
ATACCTCCGGCTCCACCGGCCGGCCGAAGGGGGTGGCCCACACCACCGCC
GGCTACCTCCTGTACACGGGGATGACCACCAAGCACGCCTTCGGTCTGGA
GGAGGGGGACGTCTTCGCCTGCGTGGCCGACGTCGGGTGGATCACAGGGC
ACTCGTACATCGTCTACGGGCCCCTCGTTAACGGGGCGACCTCGCTCATG
TTCGAGTCCACGCCCATGTACCCCAACCACGGAAGGTGGGGGCGAGATGC
CGTTTTTTTGTGTGTTTTTTGAAGGGCCGCCAGTTGACCTGGCCAAGGAC
TAGCGTCTTGTTTGCTTGGAAGACATGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGTTCAGGGGTTCCGTACAATGTTCGAGGGCTCCGGGGG
ACCAATGGGATCTGGTCTTGATGCCTTTCCATGCGCCTGGTGCTGTTCTC
CCAGTTTGGCTTCATATAGGGATTAACTGGGATAGGGAGCCCCACCATTT
ATGTAGGGATTAGTATTGGGGGCCCCGTCGGGGGTGAAAGAAGAACTTCT
GACGCAAAGGCGAGGACTTGCGTATCTCCAACGCTTGATTCAGCCATTGG
TCAACGATCCGCACCGACGAACGTTGTTCTTCTCCTGCTCAGGTACTGGG
ACGTCGTCCAGCGACACAAGGTGACGCAGTTCTACACCGCACCCACGGCC
ATCCGAGCGCTCATGAGCTGCGGGCCGGAGATCATCTCCAACTACGACCT
TAGCTCGCTGCGGGTGCTGGGGTCGGTCGGGGAACCCATCAACCCGGAGG
CCTGGCGCTGGTACAACGAGCACGTGCGTTGAACGAACCCGGGGGCGGGC
AAGGGATGGGGGGAGGGAGGGAGGGAAGGGTAAAGGGGGTTGTAAATATG
TTGCTTGTTGCGTTTGATTTCCTTCCTATTGTGGGCGTTGACCCTGTGGG
GGTGGAAGACGAAGAACGATGTTCAAGGTGGGGGCGGAGGCGGGGGAAGA
GGAATGTCCCATCTGGGCGCTTGCGTGGGATAGACAGGAGCGGCTCGTAC
AGGTTCCCTGGCGATTCCTTCCAGCTTGCATCGATCAGCCCATGGCGTGC
TTTTTCTTTCTTTCGTGGTTCCTCTCAACTATACCGTGTACCCAGCCCGT
CACCCGCAACAGACCTCTCTGCGTTCCAGCTATTCCGTCTCCGACCGGCA
TCGAATTTTCGTCCGCTGTGATTCCGCTCTTCGTGCCTCGTGTAGCCATC
CACTACCCACGGAACCCCTTCGCGTCCCCACCCCTTCTTCGAAACACCCA
TCTACGTACCCCCCCCCCCCTCGGTCGTGGTCGTGGTCGTGGTTGGTGTG
TTGGGCTTATCATTTGCCTTTTGTTGTTTCGACGTTCAGGTAGGCAAGGG
CAAGTGCCACATCGTGGACACCTTCTGGCAGACGGAGACGGGAGGGCACG
TCATGCTCCCCCTGGCCAACGTCACGCCGACCAAGCCGGGCTCTTGTTCC
TTCCCCTTCTTCGGAATCGAGGTGATCTGGTACAAGTCAGCTTCGATCTG
GCTTGAATGTGCTCCTTGGAAACATGGACCAGGCAAAACAACAAGTAAGC
ACGCACACACATACACAGACGCAGACAGCCGTCCTCCCCAGGTGCTGTTC
TCTCTTCGCATGCTAGCGTATTTTGCTCGTGTGTGGCTCCTAACGTCTGT
CTTTCTCGGCGTGCGCGTTTTTCGTGTCCAGCCGGCCGTGCTCAACGCGC
AGACTGGGGAGGAGGTGACGGGCAACGACGTGGAAGGCGTGCTCGCCTTC
AAGCGCCCGTGGCCGTCTCTTGCCCGCACTGTATACGGGGACCACAAGCG
GTACATGGACGTCTACCTCAACCCTTACAAGGTGCGCGTCTTCTTGATGT
GTGTGTGTGTTCATGCCTTTTTTTTCGACGTCTATGCTATACCTTTTCGT
CCTGACGTGGGTTCAGTTTACATGTCGCGATGTTGATCAAGGTGGGTTTG
GTCTTGGTGTGCTTGGTCTTAAGGCTGTCCGTGGTTTGATATTCCTTGTC
GTGGGCCTGTTGACAAGTACCAACGTGCAGCTGTAGGTGGGTCGGTGTGC
TTCTCAAGGGTCTCGGTTGGTTTGGTTCCGGGACGCCAATGCCCTGGGTT
GTGCAAATAGTAAACGAGCGAAGAGGTGATGGTGGTGCGCATGTGGCAGG
TTTGGTGCCTCACCCGGGTGCTTGTGTTTGCACCTATTTAGATGTGCGGG
GATGTAACATACTTTCCCAAAGCGCTCGAGGAAAGCCGTACAATTCTCGA
TGGCCTGCTCTACCAAGTCTGTTTGACAGTAGTTTTGGTGTCCATGTTGA
AATACAGCCTCTCGCGCCACAGCTACTTGAACGTGGAAGGCTCGTGTTTC
TGCTTCAACGTCACTCCGCTGTTGAAGATTTCATGTGGAGCAAATCGGAG
ACCCATGCACCGTTCCATGCACAGTTCCCCCCCCCCCCCCCCGCCCCCTT
TGCCACACCTTCGTTATTGTTTTCGTGTAGGGCTACTACTTCACGGGAGA
CGGCTGCCACCGAGATTCTGACGGTTTCTACTGGATTACCGGAAGGGTGG
ACGATGTTCTCAACGTGTCCGGCCACCGCATCGGCACCGCAGAGGTTTGT
AGCCGTAGAACAATTGATAGGTCTTACATATAGCAGGTGGTATACTGCAG
TGTCAAAGTGCTGCACGTTCGCCTATCTGCCGCGTACGACACAAGATAAA
CAACAGGTACTTTGCCCGCTGGTTCGGCTGCTGCATTCACGCGATGACGA
AGGCTCGGCCGATCACGCCTTGCTTTCAAATTATGTAAGCTTCTGCTACA
CCTGCGGCAGCTTTTGCCGCTGCTGCTGCTGGCACATAAACAGGCGCCAA
TGTGGCAGCCACCGCACCGGCTCAACAGCCTCTATCTGTAGTTGGCAGGC
AGTGGTACCACACCCCACACACCCTGGTTAACACCCCCCCGACACGCAAC
AAGTAGACCTGACGTTTTTAGAAGGGTAGCACTCCCGTGTGCTCACTTTT
GTTTCGCAACGTCAACAATGATGACAATATCGCCACCACCATCACCGCCA
CCATCAATTTTCGCTGTTTTCCCGGATCCATTATGTATCCACCTCTCGCG
CACGGGAATGTAGGTGGAGAGTGCACTGGTGCTGCACCCGGCGGTGTCCG
AAGCAGCCGTCGTCGGCTTCCCCGACCCCATCAAGGGGCAGGCTATCTGC
TGCTACGTGACCTTCGTGTCTGGGTAAGGAGTTCGGTATATGTTGTGATG
CTTTGTTTGGCTCTATGATATCACGGCTGGTTGTTGTAATGGATGGGCTG
CTGGCAATGCAATGAGTGTTGGTTTTCGTCTTCATAGTACGTGTGTGGCG
TCTTTCTTGCTGCGGGGAGCCCCCGAAGTGTGTGATCGTCGTGGAAGGCG
TTCGGAGTCGTCGAAAGCAGAGCGCTACGACCACAGCAGTCATTTGCTGG
TCCGGGAAGCAATCCGCAAAGTGCTGGCGAGGGCGACAGTCTCTGTCGTG
ACCTGCGGGCGTTATGTATTCGACCCTTTGCTCACGCGTCCCTGATGCCT
GGCCACCACTCTTTTCCCGCGTGTTTCGATGACAGTCGAACGATGACATG
TAGTTTCATGATTACATGTGGTTTCGCGATGGCATGAAACTTGACGGTGG
CGTCGATCGTGGAATTTTGGTTCTGGATTGTTCTGGCAGTTACACCGAGT
CCCCGGAGCTGCTGAAGGAATTGGTCAAGCAGGTGGCTACGCACATCGGC
CCGTTCGCACGGCCAGGGATGATCGTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9853:1..7077+

>mRNA_Ecto-sp8_S_contig9853.31673.1 ID=mRNA_Ecto-sp8_S_contig9853.31673.1|Name=mRNA_Ecto-sp8_S_contig9853.31673.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1326bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9853:1..7077+ (Ectocarpus species8 EcLAC_412)
CTGGGCGCCCCTCACAGCGTGGTGTTCGCTGGTTTCAGCGCTGAGGCCCT
GCGAGACCGCATCGTGGACGCCAACAGCAAGTGGGTGTTCACGACGGATG
AGGGGAGGAGGGGGGGCAAGACCCTGCACCTCAAGAGCATCGTCGACAAG
GCCGTGGAGGACGCTGACTGCGTGGAAAAGGTCTTGGTCATCACTGCCAC
AGGGGCCAAGGTTCCGATGGGGAAGCGCGACGTGCAGATGTCGGAGATGC
TCCCGCGCATGAGACCCTACTGCCCGTGCGAAACGATGGACTCAGAGGAC
CTCCTCTTCATCCTGTATACCTCCGGCTCCACCGGCCGGCCGAAGGGGGT
GGCCCACACCACCGCCGGCTACCTCCTGTACACGGGGATGACCACCAAGC
ACGCCTTCGGTCTGGAGGAGGGGGACGTCTTCGCCTGCGTGGCCGACGTC
GGGTGGATCACAGGGCACTCGTACATCGTCTACGGGCCCCTCGTTAACGG
GGCGACCTCGCTCATGTTCGAGTCCACGCCCATGTACCCCAACCACGGAA
GGTACTGGGACGTCGTCCAGCGACACAAGGTGACGCAGTTCTACACCGCA
CCCACGGCCATCCGAGCGCTCATGAGCTGCGGGCCGGAGATCATCTCCAA
CTACGACCTTAGCTCGCTGCGGGTGCTGGGGTCGGTCGGGGAACCCATCA
ACCCGGAGGCCTGGCGCTGGTACAACGAGCACGTAGGCAAGGGCAAGTGC
CACATCGTGGACACCTTCTGGCAGACGGAGACGGGAGGGCACGTCATGCT
CCCCCTGGCCAACGTCACGCCGACCAAGCCGGGCTCTTGTTCCTTCCCCT
TCTTCGGAATCGAGCCGGCCGTGCTCAACGCGCAGACTGGGGAGGAGGTG
ACGGGCAACGACGTGGAAGGCGTGCTCGCCTTCAAGCGCCCGTGGCCGTC
TCTTGCCCGCACTGTATACGGGGACCACAAGCGGTACATGGACGTCTACC
TCAACCCTTACAAGGGCTACTACTTCACGGGAGACGGCTGCCACCGAGAT
TCTGACGGTTTCTACTGGATTACCGGAAGGGTGGACGATGTTCTCAACGT
GTCCGGCCACCGCATCGGCACCGCAGAGGTGGAGAGTGCACTGGTGCTGC
ACCCGGCGGTGTCCGAAGCAGCCGTCGTCGGCTTCCCCGACCCCATCAAG
GGGCAGGCTATCTGCTGCTACGTGACCTTCGTGTCTGGTTACACCGAGTC
CCCGGAGCTGCTGAAGGAATTGGTCAAGCAGGTGGCTACGCACATCGGCC
CGTTCGCACGGCCAGGGATGATCGTC
back to top