mRNA_Ecto-sp8_S_contig985.31666.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: D8LSB9_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB9_ECTSI) HSP 1 Score: 1461 bits (3781), Expect = 0.000e+0 Identity = 754/825 (91.39%), Postives = 765/825 (92.73%), Query Frame = 1
Query: 208 FEVTYGEAPSHEAEAIIVGLKPGKAYQFLVASISAERMLVPGSSVVSDPVQLPEAEYEKAWFFEGGEDDINWTAFEGLGPENVGAAGGXXXXXXGDSTALDDIRCSPSPTRCFTGLRSLCLVVPAGLAGGAYVDTPVKEGWLYVVKAKVFHEEEGGGXXXXXXXXXXGAGRKSSRLAMMTGWTAGRKGSKSNVTTRLVLWDMRDGKEMSAPAVKTGEWEALECQIVPFRSEHLRVAIQSGGEGRGSNIYVDAVELFHGGPTPAERAISAAVDLMDEPRPMPSKVLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKVAPPHRVEHKAVKDPIRGAGDSGDRAATEVVIPRLKPARTKRGGHRGRGGMGAVPPPTILALAIQVSWPKDPESAEGKLVRTLQDEQGLLSTRVNALK--------ELSMAALRAPRNIEDAAKAKSLLLRSRAAEAAVWVLADPNFLEDACRLLIGLVQLGHDAAHSEAGFGLCQRLRLFVLQLSPAVVAVRCLRASVGPPETLLELLAKLYVGQQAALHEDVVNIQGFFYSLVLHIDTSAPAQALVREISGGARELPDGLVALFRRYRTRIPPLPGLWRSTMLQKLSAEEAHPPDLEGDDLEANEDDHDLNPASRGGNREGEPSLPDRIRAHLTVALMAVPPLFKAVVGGRRVGAPGSCEQPVGTVLVLDGLVLMGAVFGGGCFRINRRRFSALAGTWLFPTLFLAFLLHLGLVAGLLVSLARVDSVEAGGGQGEDDG 2658
F+VTYGEAPSHEAEA+IVGLKPGKAYQFLVASISAERMLVPGSS+VSDPVQLPEAEYEKAWFFEGGEDDI W AFEGLGPENVGAAGGXXXXXX STALDDIRCSPSPTRCFTGLRSLCLVVPAGLAGGAYVDTPVKEGWLYVVKAKVFHEEEGGG GAGRK SRLAMMTGWTAGRKGSKSNVTTRLVLWDMRDGKEMSAPAVKTGEWEALECQIVPFRSEHLRVAIQSGGEGR SNIYVDAVELFHGGPTPAERAISAAVDLMDEPRPMPSKV FVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPG NADGDG+RFEMWDHDLHGQGDYLGEVCLTSDALKVAPPHRVEH+AVKDPIRGAGDSGDR ATEVVIP+LKPARTKRGGHRGRGGMGAVPPPTILALAIQVSWPKDPESAEGKLVR LQDEQGLLS RVNALK ELSMAALRAPRNIEDAAKAK LLLRSRAAEAAVWVLADPNFLEDACRLLIGLVQLGHDA HSEAGFGLC+RLRLFVLQLSPAVVAVRCLRASVGPPE LLELLAKLYVGQQAALHEDVVNI+GFFYSLVLHIDTSAPAQALVR+ISGGARELPDGLVA+FRRYRTRIPPLPGLWR TMLQKLSAEEAHPPDLEGDDLEANEDDHDLNPASRGGNRE EPSLPDRIRAHLTVALMAVPPLFKAVVGGRR+GAPGSCEQPVGTVLVLDGLVLM AVFGGGCFRINRRRFSALAGTWLFPTLFLAFLLHLGLVAGLLVSLARVDSVEAG GQGEDDG
Sbjct: 13 FKVTYGEAPSHEAEAVIVGLKPGKAYQFLVASISAERMLVPGSSIVSDPVQLPEAEYEKAWFFEGGEDDIKWAAFEGLGPENVGAAGGXXXXXXXXSTALDDIRCSPSPTRCFTGLRSLCLVVPAGLAGGAYVDTPVKEGWLYVVKAKVFHEEEGGGVGDGAGAEAEGAGRKGSRLAMMTGWTAGRKGSKSNVTTRLVLWDMRDGKEMSAPAVKTGEWEALECQIVPFRSEHLRVAIQSGGEGRESNIYVDAVELFHGGPTPAERAISAAVDLMDEPRPMPSKV-------------------------FVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGLNADGDGIRFEMWDHDLHGQGDYLGEVCLTSDALKVAPPHRVEHEAVKDPIRGAGDSGDRTATEVVIPKLKPARTKRGGHRGRGGMGAVPPPTILALAIQVSWPKDPESAEGKLVRILQDEQGLLSARVNALKRILPTLLQELSMAALRAPRNIEDAAKAKILLLRSRAAEAAVWVLADPNFLEDACRLLIGLVQLGHDAGHSEAGFGLCRRLRLFVLQLSPAVVAVRCLRASVGPPEILLELLAKLYVGQQAALHEDVVNIRGFFYSLVLHIDTSAPAQALVRDISGGARELPDGLVAMFRRYRTRIPPLPGLWRPTMLQKLSAEEAHPPDLEGDDLEANEDDHDLNPASRGGNREEEPSLPDRIRAHLTVALMAVPPLFKAVVGGRRIGAPGSCEQPVGTVLVLDGLVLMCAVFGGGCFRINRRRFSALAGTWLFPTLFLAFLLHLGLVAGLLVSLARVDSVEAGSGQGEDDG 812
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A6H5L382_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L382_9PHAE) HSP 1 Score: 651 bits (1679), Expect = 1.700e-225 Identity = 346/409 (84.60%), Postives = 353/409 (86.31%), Query Frame = 1
Query: 1666 MAALRAPRNIEDAAKAKSLLLRSRAAEAAVWVLADPNFLEDACRLLIGLVQLGHDAAHSEAGFGLCQRLRLFVLQLSPAVVAVRCLRASVGPPETLLELLAKLYVGQQAALHEDVVNIQGFFYSLVLHIDTSAPAQALVREISGGARELPDGLVALFRRYRTRIPPLPGLWRSTMLQKLSAEEAHPPDLEGDDLEANEDDHDLNPASRGGNREGEPSLPDRIRAHLTVALMAVPPLFKAVVGGRRVGAPGSCEQPVGTVLVLDGLVLMGAVFGGGCFRINRRRFSALAGTWLFPTLFLAFLLHLGLVAGLLVSLARVDSVEAGGGQGEDDGKVTCSSGTFAWGVLFLVLDLLLLVAPPVWWCARCYDRATRSVPAVAATSVLVVPDESPATDAKPVASVGGDNDAGQAI 2892
MAALRAPRNIEDAAKAK LLLRSRAAEAAVWVLADPNFLEDACRLLIGL+ LLE LAKLYVGQQAALHEDVVNI+GFFYSLVLHIDTSAPAQALVREISGGARELPDGLVALF RYRTRIPPLPGLWRSTMLQK+SAEEAHPPDLEGDDLEANEDDHDLNPASRGG REGEPSLPDRIRAHLTVALMA+PPLFKAV GGRRVGAPGSCEQPVGTVLVLDGLVLM AVFGGGCFRINR RFS LAGTWLFPTL LAFLLHLGLVAGLLVSLARVDSVEAGGGQG+DDGKVTCSSGTFAWGV+FLVLDLLLLVAPPVWWCARCYDRATRSVPAVAATSVLVVPDE PATDAKPVASVGGD+DA QAI
Sbjct: 1 MAALRAPRNIEDAAKAKILLLRSRAAEAAVWVLADPNFLEDACRLLIGLI---------------------------------------------LLEFLAKLYVGQQAALHEDVVNIRGFFYSLVLHIDTSAPAQALVREISGGARELPDGLVALFHRYRTRIPPLPGLWRSTMLQKISAEEAHPPDLEGDDLEANEDDHDLNPASRGGTREGEPSLPDRIRAHLTVALMAMPPLFKAVAGGRRVGAPGSCEQPVGTVLVLDGLVLMCAVFGGGCFRINRHRFSILAGTWLFPTLLLAFLLHLGLVAGLLVSLARVDSVEAGGGQGKDDGKVTCSSGTFAWGVMFLVLDLLLLVAPPVWWCARCYDRATRSVPAVAATSVLVVPDERPATDAKPVASVGGDDDADQAI 364
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A835Z918_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z918_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.590e-41 Identity = 130/401 (32.42%), Postives = 179/401 (44.64%), Query Frame = 1
Query: 106 DISTTSVRVTWPKFSNKKYPV---------------------YAYRVCTAEVGSG--FEVTYGEAPSHEAEAIIVGLKPGKAYQFLVASISAERMLVPGSSVVSDPVQLPEAEYEKAWFFEGGEDDINWTAFEG---LGPENVGAAGGXXXXXXGDSTALDDIRCSPSPTRCFTGLRSLCLVVPAGL---AGGAYVDTPVKEGWLYVVKAKVFHEEEGGGXXXXXXXXXXGAGRKSSRLAMMTGWTAGRKGSKSNVTTRLVLWDMRDGKEMSAPAVKTGEWEALECQIVPFRSEHLRVAIQSGGE-GRGS-NIYVDAVELFHGGPTPAERAISAAVDLMDEPRPMPSKVLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFL 1215
D++TT++R+ WP + + PV + Y + + VGSG F + A+I LK Y+F +A++S E M++PGSSVVS P+ LPE +YE AWFFE DD+ W A+EG + + GA S D + RCFTGLRS+ + VPAG GG ++DTPV +G YV A V S AV + +WE L C+I S LR+A+ + GS Y+DAVEL GPT E A +A + PS + V V A +RAAD +G SDP+V V+ E+ +T+V+PMTL+P WDETF L
Sbjct: 709 DVTTTALRLGWPVPNVARCPVCCATIVSGKSCLLLVEGRSVIHGYCISSDIVGSGQGFHTLIKHTGTTATSAVIAALKQRLTYRFHIAALSDEGMVIPGSSVVSAPIALPEPKYEAAWFFESTADDVQWRAYEGDALVADQQDGALA---------SMEGDAVEAEMKKERCFTGLRSMRVAVPAGCDGGCGGIFIDTPVTDGRRYVCSAMV-----------------------------------------------------------STGAVLSEQWEQLTCEITIQHSHTLRIAVATMPPVPPGSCTFYLDAVELVQAGPTDFELAAAALDAAVHCSWSSPSSLTVTVAGASSLRAADVMGASDPYVCVYWCGKEIGQTQVMPMTLTPRWDETFVL 1041
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A1Y1HWN3_KLENI (Calcium-dependent lipid-binding protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWN3_KLENI) HSP 1 Score: 77.4 bits (189), Expect = 6.830e-11 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 1063 VRVESARDVRAADTLGTSDPFVKVFVGNAEVHR-TKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLT 1347
V V A ++RAAD GTSDPFV+VF+ N ++ + TKVIP TL+PVWD+TF E +A D ++ E+WDHD G+ D+LG V +T
Sbjct: 435 VTVRKAEELRAADMGGTSDPFVRVFMRNGDMKKKTKVIPKTLNPVWDQTFEFLVE------------DAARDMLQLEVWDHDTFGK-DFLGRVSIT 517
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: F7BI79_ORNAN (RAS protein activator like 1 n=4 Tax=Monotremata TaxID=9255 RepID=F7BI79_ORNAN) HSP 1 Score: 74.7 bits (182), Expect = 6.670e-10 Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 1006 ISAAVDLMDEPRPMPSKVLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKVAPPH 1377
I AV L++EP+ K+ V ARD+ D GTSDPF ++F GN V T VI T P WDE L G A G +R E+WD DL G+ D+LG+V T + L+ +PP+
Sbjct: 120 IHLAVHLLEEPQG--KKLRCHVIEARDLAPRDISGTSDPFARLFYGNQSV-ETAVIKKTRFPHWDEVLELE----------LWGEEAVGAHLRLEVWDWDLVGRNDFLGQVEFTPEVLQHSPPN 230
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A7S2SJY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.110e-9 Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 1
Query: 1093 AADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKVAPPHRVEHKAVKD 1404
AAD GTSDP+ V EV RT VI TL+P W + FL P D+ +R E++DHDL G D+LG+V LT D L P + +D
Sbjct: 2 AADITGTSDPYCVVHWNGQEVGRTSVIQRTLNPNWSDATFLLPVDQELLDSE----------LRIEVFDHDLVGDDDFLGQVVLTGDKLSHPNPDKASEALQRD 95
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A7S0XTH7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTH7_HEMAN) HSP 1 Score: 62.4 bits (150), Expect = 1.930e-7 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 1057 VLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKV 1365
V+ + A ++ AAD+ GTSDPFV V +G E T+ + TL+P+WD T L E P D D V ++WD+D G D+LG ++ + LK+
Sbjct: 44 VVANIVEASNIAAADSTGTSDPFVIVKIGTNE-KMTECVRETLNPIWDCTIQL--EVP-----------YDADSVEVQIWDNDAWGDNDFLGLASVSINKLKI 132
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: T1KC64_TETUR (Uncharacterized protein n=4 Tax=Tetranychus urticae TaxID=32264 RepID=T1KC64_TETUR) HSP 1 Score: 64.7 bits (156), Expect = 8.610e-7 Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 1063 VRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKV 1365
+ ++SA ++ A D+ GTSDP+VK+ GN +V+++K+IP L+PVWDE L+ E D P + +++DHD DYLG L L++
Sbjct: 253 LHLQSASNLLAKDSCGTSDPYVKLKFGNKQVYKSKIIPKNLNPVWDEYTVLAIE-----DVFQP--------LSIKVYDHDFGLTDDYLGTATLDLTRLEL 340
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A7S1EBE1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EBE1_HEMAN) HSP 1 Score: 62.4 bits (150), Expect = 8.840e-7 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 1057 VLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVCLTSDALKV 1365
V+ + A ++ AAD+ GTSDPFV V +G E T+ + TL+P+WD T L E P D D V ++WD+D G D+LG ++ + LK+
Sbjct: 154 VVANIVEASNIAAADSTGTSDPFVIVKIGTNE-KMTECVRETLNPIWDCTIQL--EVP-----------YDADSVEVQIWDNDAWGDNDFLGLASVSINKLKI 242
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Match: A0A1Y1I052_KLENI (Synaptotagmin family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I052_KLENI) HSP 1 Score: 64.3 bits (155), Expect = 1.190e-6 Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 1
Query: 1006 ISAAVDLMDEPRPMPSKVLVRVESARDVRAADTLGTSDPFVKVFVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGFNADGDGVRFEMWDHDLHGQGDYLGEVC--LTSDALKVAPPH-------RVEHKAVKDPIRG 1416
+S+ DL+D+ + VRV AR + AAD+ GTSDP+VK+ VG +T+VI L+P W+E F + G D N + + + +WD D D+LG++ L S ++V P ++E +++KD ++G
Sbjct: 333 VSSPFDLVDQVE----YLFVRVLRARALLAADSNGTSDPYVKIHVGPRSA-QTRVIKHELNPEWNEVFAFNKAPGSGSDQNH--IDRETGVLELSVWDEDFLTADDFLGQIQIPLHSVPMRVYPEKGVDPQWFKLERRSLKDAVKG 471 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig985.31666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig985.31666.1 >prot_Ecto-sp8_S_contig985.31666.1 ID=prot_Ecto-sp8_S_contig985.31666.1|Name=mRNA_Ecto-sp8_S_contig985.31666.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=965bp KAPPQESGGCSSTTAVLKDGRAMAPAFPTGGVSCHDISTTSVRVTWPKFSback to top mRNA from alignment at Ecto-sp8_S_contig985:962..8262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig985.31666.1 ID=mRNA_Ecto-sp8_S_contig985.31666.1|Name=mRNA_Ecto-sp8_S_contig985.31666.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7301bp|location=Sequence derived from alignment at Ecto-sp8_S_contig985:962..8262- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig985:962..8262- >mRNA_Ecto-sp8_S_contig985.31666.1 ID=mRNA_Ecto-sp8_S_contig985.31666.1|Name=mRNA_Ecto-sp8_S_contig985.31666.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2895bp|location=Sequence derived from alignment at Ecto-sp8_S_contig985:962..8262- (Ectocarpus species8 EcLAC_412)back to top |